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MOUSE:TNR16

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Ngfr (synonyms: Tnfrsf16)
Protein Name(s) Tumor necrosis factor receptor superfamily member 16

Low affinity neurotrophin receptor p75NTR Low-affinity nerve growth factor receptor NGF receptor

External Links
UniProt Q9Z0W1
EMBL AF105292
UniGene Mm.283893
ProteinModelPortal Q9Z0W1
SMR Q9Z0W1
IntAct Q9Z0W1
MINT MINT-243918
PhosphoSite Q9Z0W1
MaxQB Q9Z0W1
PaxDb Q9Z0W1
PRIDE Q9Z0W1
MGI MGI:97323
eggNOG NOG39106
HOVERGEN HBG060431
InParanoid Q9Z0W1
Reactome REACT_202271
REACT_209641
PRO PR:Q9Z0W1
Proteomes UP000000589
Genevestigator Q9Z0W1
GO GO:0009986
GO:0005737
GO:0016021
GO:0097481
GO:0005886
GO:0005035
GO:0048406
GO:0017137
GO:0006915
GO:0007411
GO:0007417
GO:0032922
GO:0007623
GO:0016048
GO:0042593
GO:0031069
GO:0006886
GO:0040037
GO:0051799
GO:0021675
GO:2001235
GO:0048146
GO:0042488
GO:0010468
GO:2001273
GO:0043588
Gene3D 1.10.533.10
InterPro IPR011029
IPR000488
IPR001368
IPR022325
Pfam PF00531
PF00020
PRINTS PR01966
SMART SM00005
SM00208
SUPFAM SSF47986
PROSITE PS50017
PS00652
PS50050

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0009986

cell surface

PMID:3815101[1]

ECO:0000314

C

Figure 1A. Western blotting reveals the presence of p75NTR on cell surfaces.

complete
CACAO 9323

GO:0045773

positive regulation of axon extension

PMID:3815101[1]

ECO:0000315

P

Figure 2b. APP deficient neurons lead to decreased cell surface levels of p75NTR, and Figure 3A. shows that the decreased cell surface levels of p75NTR in APP deficient cells significantly decrease neurite outgrowth relative to control cells.

complete
CACAO 9325

enables

GO:0005516

calmodulin binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P08138

F

Seeded From UniProt

complete

involved_in

GO:0035907

dorsal aorta development

PMID:11559852[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P18519

C

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

PMID:10021336[3]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0001678

cellular glucose homeostasis

PMID:22460790[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042593

glucose homeostasis

PMID:22460790[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0032922

circadian regulation of gene expression

PMID:23785138[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0017137

Rab GTPase binding

PMID:22460790[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0007623

circadian rhythm

PMID:23785138[5]

ECO:0000270

expression pattern evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006886

intracellular protein transport

PMID:22460790[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0048406

nerve growth factor binding

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97323
PANTHER:PTN001133900
RGD:3177
UniProtKB:P18519

F

Seeded From UniProt

complete

enables

GO:0015026

coreceptor activity

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001133900
UniProtKB:P08138

F

Seeded From UniProt

complete

part_of

GO:0009986

cell surface

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97323
PANTHER:PTN001133900
RGD:3177

C

Seeded From UniProt

complete

involved_in

GO:0007266

Rho protein signal transduction

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001133900
UniProtKB:P08138

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97323
PANTHER:PTN001133900
RGD:3177
UniProtKB:P08138
UniProtKB:P18519

C

Seeded From UniProt

complete

enables

GO:0005035

death receptor activity

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:97323
PANTHER:PTN001133900
UniProtKB:P08138

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:2001235

positive regulation of apoptotic signaling pathway

PMID:10764727[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:2000463

positive regulation of excitatory postsynaptic potential

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:2000377

regulation of reactive oxygen species metabolic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:2000179

positive regulation of neural precursor cell proliferation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1904646

cellular response to amyloid-beta

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1903588

negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1902895

positive regulation of pri-miRNA transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1901216

positive regulation of neuron death

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:1900182

positive regulation of protein localization to nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

P

Seeded From UniProt

complete

enables

GO:0070678

preprotein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0061000

negative regulation of dendritic spine development

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051968

positive regulation of synaptic transmission, glutamatergic

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051902

negative regulation of mitochondrial depolarization

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051897

positive regulation of protein kinase B signaling

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051799

negative regulation of hair follicle development

PMID:10588868[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

  • regulates_o_results_in_development_of:(EMAPA:18771)
  • regulates_o_has_participant:(CL:0000057)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051402

neuron apoptotic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

P

Seeded From UniProt

complete

enables

GO:0048406

nerve growth factor binding

PMID:1317267[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0048406

nerve growth factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048146

positive regulation of fibroblast proliferation

PMID:10588868[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045666

positive regulation of neuron differentiation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

part_of

GO:0045334

clathrin-coated endocytic vesicle

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

part_of

GO:0045121

membrane raft

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

enables

GO:0044877

protein-containing complex binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043588

skin development

PMID:1317267[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

results_in_development_of:(EMAPA:32726)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043524

negative regulation of neuron apoptotic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043410

positive regulation of MAPK cascade

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

part_of

GO:0043204

perikaryon

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

enables

GO:0043121

neurotrophin binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043066

negative regulation of apoptotic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043065

positive regulation of apoptotic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

enables

GO:0042803

protein homodimerization activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

F

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042488

positive regulation of odontogenesis of dentin-containing tooth

PMID:9268129[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

regulates_o_results_in_formation_of:(EMAPA:32897)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0040037

negative regulation of fibroblast growth factor receptor signaling pathway

PMID:10588868[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

  • regulates_o_occurs_in:(EMAPA:18771)
  • regulates_o_occurs_in:(CL:0000057)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0035025

positive regulation of Rho protein signal transduction

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0034599

cellular response to oxidative stress

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

part_of

GO:0032809

neuronal cell body membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

part_of

GO:0032590

dendrite membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0032224

positive regulation of synaptic transmission, cholinergic

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0031643

positive regulation of myelination

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

enables

GO:0031625

ubiquitin protein ligase binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0031069

hair follicle morphogenesis

PMID:10588868[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

Seeded From UniProt

complete

part_of

GO:0030135

coated vesicle

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0021675

nerve development

PMID:1317267[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0019233

sensory perception of pain

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0016525

negative regulation of angiogenesis

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0016048

detection of temperature stimulus

PMID:1317267[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

occurs_in:(EMAPA:32726)

Seeded From UniProt

complete

enables

GO:0015026

coreceptor activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

F

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

PMID:24069373[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010977

negative regulation of neuron projection development

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010976

positive regulation of neuron projection development

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010941

regulation of cell death

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010468

regulation of gene expression

PMID:10588868[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

  • occurs_in:(EMAPA:18771)
  • occurs_in:(CL:0000057)
  • has_regulation_target:(MGI:MGI:95523)

Seeded From UniProt

complete

part_of

GO:0009897

external side of plasma membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0009611

response to wounding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007417

central nervous system development

PMID:11978834[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007411

axon guidance

PMID:11978834[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:1857226

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007266

Rho protein signal transduction

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007165

signal transduction

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006919

activation of cysteine-type endopeptidase activity involved in apoptotic process

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

P

Seeded From UniProt

complete

part_of

GO:0005911

cell-cell junction

PMID:21300049[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:10536054[14]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(EMAPA:16255)

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

part_of

GO:0005791

rough endoplasmic reticulum

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

part_of

GO:0005739

mitochondrion

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:25433207[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:19295126[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

part_of

GO:0005635

nuclear envelope

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

C

Seeded From UniProt

complete

enables

GO:0005516

calmodulin binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

F

Seeded From UniProt

complete

enables

GO:0005168

neurotrophin TRKA receptor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

F

Seeded From UniProt

complete

enables

GO:0005035

death receptor activity

PMID:10764727[7]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0005035

death receptor activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:P08138

F

Seeded From UniProt

complete

enables

GO:0001540

amyloid-beta binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:3177

F

Seeded From UniProt

complete

involved_in

GO:0007165

signal transduction

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000488

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

Reactome:R-MMU-205099
Reactome:R-MMU-205060
Reactome:R-MMU-204967
Reactome:R-MMU-194544

ECO:0000304

author statement supported by traceable reference used in manual assertion




C

Seeded From UniProt

complete

involved_in

GO:0048511

rhythmic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0090

P

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0524

P

Seeded From UniProt

complete

involved_in

GO:0030154

cell differentiation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0221

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

involved_in

GO:0006915

apoptotic process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0053

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

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  15. Serinagaoglu, Y et al. (2015) Nf2-Yap signaling controls the expansion of DRG progenitors and glia during DRG development. Dev. Biol. 398 97-109 PubMed GONUTS page
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