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MOUSE:HDAC5

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Hdac5
Protein Name(s) Histone deacetylase 5

HD5 Histone deacetylase mHDA1

External Links
UniProt Q9Z2V6
EMBL AF006602
AF207748
UniGene Mm.22665
ProteinModelPortal Q9Z2V6
SMR Q9Z2V6
DIP DIP-40855N
IntAct Q9Z2V6
MINT MINT-125422
STRING 10090.ENSMUSP00000102770
BindingDB Q9Z2V6
ChEMBL CHEMBL2768
PhosphoSite Q9Z2V6
MaxQB Q9Z2V6
PaxDb Q9Z2V6
PRIDE Q9Z2V6
MGI MGI:1333784
eggNOG KOG1343
COG0123
HOVERGEN HBG057100
InParanoid Q9Z2V6
ChiTaRS Hdac5
PRO PR:Q9Z2V6
Proteomes UP000000589
CleanEx MM_HDAC5
GO GO:0005737
GO:0005829
GO:0005794
GO:0000118
GO:0016604
GO:0000790
GO:0005654
GO:0005634
GO:0090571
GO:0001047
GO:0001046
GO:0004407
GO:0042826
GO:0046872
GO:0032041
GO:0033558
GO:0019901
GO:0005080
GO:0070491
GO:0001226
GO:0001085
GO:0001025
GO:0003714
GO:0008134
GO:0001077
GO:0042113
GO:0030183
GO:0071498
GO:0016568
GO:0007507
GO:0016575
GO:0006954
GO:0033555
GO:0090051
GO:0010629
GO:0010832
GO:0045668
GO:0045843
GO:0000122
GO:0045892
GO:0007399
GO:0002076
GO:2000179
GO:0051091
GO:2000648
GO:0045944
GO:0006476
GO:0040029
GO:0010830
GO:0043393
GO:0048742
GO:0051153
GO:0061333
GO:0042220
GO:0006366
Gene3D 3.40.800.20
InterPro IPR000286
IPR023801
IPR024643
IPR017320
IPR030703
PANTHER PTHR10625
PTHR10625:SF57
Pfam PF12203
PF00850
PIRSF PIRSF037911
PRINTS PR01270

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0001226

RNA polymerase II transcription corepressor binding

PMID:12007404[1]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9JJY4

F

Seeded From UniProt

complete

part_of

GO:0090571

RNA polymerase II transcription repressor complex

PMID:12007404[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:12007404[1]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000581)

Seeded From UniProt

complete

involved_in

GO:2000648

positive regulation of stem cell proliferation

PMID:20123967[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

GO:0044295

axonal growth cone

PMID:26157139[3]

ECO:0000314

C

Figure 5A

complete
CACAO 11098

involved_in

GO:2000179

positive regulation of neural precursor cell proliferation

PMID:20123967[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:11081517[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:11081517[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0001085

RNA polymerase II transcription factor binding

PMID:20123967[2]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q64104

F

Seeded From UniProt

complete

involved_in

GO:0071498

cellular response to fluid shear stress

PMID:20181743[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0061333

renal tubule morphogenesis

PMID:20181743[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:20181743[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0019901

protein kinase binding

PMID:17468767[6]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q60670

F

Seeded From UniProt

complete

involved_in

GO:0010830

regulation of myotube differentiation

PMID:17468767[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:10748098[7]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q02078

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:17468767[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:17468767[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20181743[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:20181743[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

occurs_at:(SO:0001952)

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:20181743[5]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0090051

negative regulation of cell migration involved in sprouting angiogenesis

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

enables

GO:0070491

repressing transcription factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051153

regulation of striated muscle cell differentiation

PMID:17786239[8]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1931221
MGI:MGI:3036234

P

  • occurs_in:(EMAPA:32716)
  • regulates_o_results_in_acquisition_of_features_of:(CL:0000189)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051091

positive regulation of DNA-binding transcription factor activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0048742

regulation of skeletal muscle fiber development

PMID:17786239[8]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1931221
MGI:MGI:3036234

P

  • occurs_in:(EMAPA:32716)
  • occurs_in:(CL:0000189)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045892

negative regulation of transcription, DNA-templated

PMID:16260608[9]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045668

negative regulation of osteoblast differentiation

PMID:15990875[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

regulates_o_results_in_acquisition_of_features_of:(CL:0000062)

Seeded From UniProt

complete

contributes_to

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0043393

regulation of protein binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

enables

GO:0042826

histone deacetylase binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042493

response to drug

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:619980

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042220

response to cocaine

PMID:17988634[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3056065

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0042220

response to cocaine

PMID:17988634[11]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0040029

regulation of gene expression, epigenetic

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

enables

GO:0033558

protein deacetylase activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0033555

multicellular organismal response to stress

PMID:17988634[11]

ECO:0000315

mutant phenotype evidence used in manual assertion

MGI:MGI:3056065

P

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:619980

C

Seeded From UniProt

complete

part_of

GO:0016607

nuclear speck

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

C

Seeded From UniProt

complete

part_of

GO:0016604

nuclear body

PMID:11641275[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0016575

histone deacetylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010832

negative regulation of myotube differentiation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0010629

negative regulation of gene expression

PMID:23926128[13]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:619980

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0007507

heart development

PMID:15367668[14]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1931221

P

results_in_development_of:(EMAPA:17333)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006476

protein deacetylation

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:18332106[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:18198354[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:11081517[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:619980

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:18198354[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:11081517[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:619980

C

Seeded From UniProt

complete

enables

GO:0005080

protein kinase C binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

PMID:15990875[10]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:1201674

F

has_regulation_target:(MGI:MGI:88156)

Seeded From UniProt

complete

enables

GO:0003714

transcription corepressor activity

PMID:10640276[17]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003682

chromatin binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:619980

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0002076

osteoblast development

PMID:15990875[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

results_in_development_of:(CL:0000062)

Seeded From UniProt

complete

enables

GO:0001085

RNA polymerase II transcription factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:17940050[18]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:2137495
MGI:MGI:97275

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:15990875[10]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:98725

P

has_regulation_target:(MGI:MGI:88156)

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:15601857[19]

ECO:0000316

genetic interaction evidence used in manual assertion

MGI:MGI:2137495

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:23926128[13]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

PMID:10640276[17]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0000122

negative regulation of transcription by RNA polymerase II

GO_REF:0000008

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q9UQL6

P

Seeded From UniProt

complete

involved_in

GO:0070932

histone H3 deacetylation

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0032041

P

Seeded From UniProt

complete

part_of

GO:0000118

histone deacetylase complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017320

C

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017320
InterPro:IPR030703

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR030703

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR030703

C

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017320

P

Seeded From UniProt

complete

involved_in

GO:0016575

histone deacetylation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR017320
InterPro:IPR030703

P

Seeded From UniProt

complete

involved_in

GO:0040029

regulation of gene expression, epigenetic

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR030703

P

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.1.98

F

Seeded From UniProt

complete

enables

GO:0032041

NAD-dependent histone deacetylase activity (H3-K14 specific)

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.1.98

F

Seeded From UniProt

complete

involved_in

GO:0045892

negative regulation of transcription, DNA-templated

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045843

negative regulation of striated muscle tissue development

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042113

B cell activation

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0030183

B cell differentiation

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0007399

nervous system development

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006954

inflammatory response

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0000118

histone deacetylase complex

PMID:12711221[20]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0156

P

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

enables

GO:0046872

metal ion binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0479

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Klappacher, GW et al. (2002) An induced Ets repressor complex regulates growth arrest during terminal macrophage differentiation. Cell 109 169-80 PubMed GONUTS page
  2. 2.0 2.1 2.2 Sun, G et al. (2010) Histone demethylase LSD1 regulates neural stem cell proliferation. Mol. Cell. Biol. 30 1997-2005 PubMed GONUTS page
  3. Cho, Y et al. (2015) Filamin A is required in injured axons for HDAC5 activity and axon regeneration. J. Biol. Chem. 290 22759-70 PubMed GONUTS page
  4. 4.0 4.1 4.2 4.3 McKinsey, TA et al. (2000) Signal-dependent nuclear export of a histone deacetylase regulates muscle differentiation. Nature 408 106-11 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 5.5 Xia, S et al. (2010) Polycystin-dependent fluid flow sensing targets histone deacetylase 5 to prevent the development of renal cysts. Development 137 1075-84 PubMed GONUTS page
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