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HUMAN:PLS1

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) PLSCR1
Protein Name(s) Phospholipid scramblase 1

PL scramblase 1 Ca(2+)-dependent phospholipid scramblase 1 Erythrocyte phospholipid scramblase MmTRA1b

External Links
UniProt O15162
EMBL AF098642
AB006746
AF224492
AK300181
AC069528
AC116544
AK313377
CH471052
BC021100
BC032718
CCDS CCDS3135.1
PIR JE0284
RefSeq NP_066928.1
XP_005247595.1
UniGene Hs.130759
PDB 1Y2A
PDBsum 1Y2A
ProteinModelPortal O15162
BioGrid 111373
IntAct O15162
MINT MINT-201602
STRING 9606.ENSP00000345494
TCDB 9.A.36.1.1
PhosphoSite O15162
MaxQB O15162
PaxDb O15162
PRIDE O15162
DNASU 5359
Ensembl ENST00000342435
ENST00000448787
GeneID 5359
KEGG hsa:5359
UCSC uc003evx.4
uc011bnn.2
CTD 5359
GeneCards GC03M146232
HGNC HGNC:9092
MIM 604170
neXtProt NX_O15162
PharmGKB PA33419
eggNOG NOG119855
GeneTree ENSGT00390000002884
HOGENOM HOG000237356
HOVERGEN HBG019157
InParanoid O15162
OMA CVVGKIS
OrthoDB EOG77T14X
PhylomeDB O15162
TreeFam TF314939
SignaLink O15162
ChiTaRS PLSCR1
EvolutionaryTrace O15162
GeneWiki PLSCR1
GenomeRNAi 5359
NextBio 20774
PRO PR:O15162
Proteomes UP000005640
Bgee O15162
CleanEx HS_PLSCR1
ExpressionAtlas O15162
Genevestigator O15162
GO GO:0005829
GO:0031012
GO:0070062
GO:0005794
GO:0005887
GO:0016020
GO:0045121
GO:0005730
GO:0005634
GO:0005886
GO:0005509
GO:0042609
GO:0003677
GO:0019899
GO:0005154
GO:0017128
GO:0001077
GO:0017124
GO:0006953
GO:0006915
GO:0051607
GO:0045071
GO:0006659
GO:0017121
GO:0030168
GO:2000373
GO:0010628
GO:0045089
GO:0045944
GO:0060368
GO:0033003
GO:0035456
InterPro IPR005552
PANTHER PTHR23248
Pfam PF03803

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005886

plasma membrane

PMID:22052202[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:22052202[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

GO:1901838

positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter

PMID:24356419[2]

ECO:0000314

P

Figure 3A-F provides data proving that HeLa cells that were transiently transfected with over-expression of PLSCR1 have higher levels of 47S pre-rRNA than HeLa cells transiently transfected with a control.

complete

part_of

GO:0048471

perinuclear region of cytoplasm

PMID:22052202[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

PMID:24356419[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

GO:0005730

nucleolus

PMID:24356419[2]

ECO:0000314

C

Figure 2A-C provides data confirming that ANG is in the nucleus of Hela cells.

complete
CACAO 9343

part_of

GO:0070062

extracellular exosome

PMID:23533145[3]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:19946888[4]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0070062

extracellular exosome

PMID:19056867[5]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

part_of:(UBERON:0001088)

Seeded From UniProt

complete

involved_in

GO:2000373

positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity

PMID:17567603[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0060368

regulation of Fc receptor mediated stimulatory signaling pathway

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P58195

P

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

PMID:15308695[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:16091359[8]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0045121

membrane raft

PMID:12009895[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0045089

positive regulation of innate immune response

PMID:15308695[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045071

negative regulation of viral genome replication

PMID:15308695[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0042609

CD4 receptor binding

PMID:19333378[10]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P01730

F

Seeded From UniProt

complete

involved_in

GO:0035456

response to interferon-beta

PMID:15308695[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0033003

regulation of mast cell activation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P58195

P

Seeded From UniProt

complete

part_of

GO:0062023

collagen-containing extracellular matrix

PMID:20870722[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0030168

platelet activation

PMID:9218461[12]

ECO:0000303

author statement without traceable support used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:12586838[13]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P56817

F

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:17567603[6]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q02880

F

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:17567603[6]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P11388

F

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:17712045[14]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P24158

F

Seeded From UniProt

complete

enables

GO:0017128

phospholipid scramblase activity

PMID:10770950[15]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0017128

phospholipid scramblase activity

PMID:18629440[16]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0017128

phospholipid scramblase activity

PMID:9218461[12]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_in:(CL:0000232)|occurs_in:(CL:0000233)

Seeded From UniProt

complete

enables

GO:0017124

SH3 domain binding

PMID:11390389[17]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0017121

plasma membrane phospholipid scrambling

PMID:10770950[15]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0017121

plasma membrane phospholipid scrambling

PMID:18629440[16]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0017121

plasma membrane phospholipid scrambling

PMID:9218461[12]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(CL:0000232)|occurs_in:(CL:0000233)

Seeded From UniProt

complete

involved_in

GO:0010628

positive regulation of gene expression

PMID:15308695[7]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006953

acute-phase response

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JJ00

P

Seeded From UniProt

complete

involved_in

GO:0006915

apoptotic process

PMID:10770950[15]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(CL:0000775)

Seeded From UniProt

complete

involved_in

GO:0006659

phosphatidylserine biosynthetic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q9JJ00

P

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:12586838[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005887

integral component of plasma membrane

PMID:9218461[12]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000232)

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:19333378[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:20870722[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:17712045[14]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000775)

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:17712045[14]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(CL:0000775)

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

PMID:12586838[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

PMID:17567603[6]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:20870722[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

PMID:18629440[16]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0005509

calcium ion binding

PMID:9218461[12]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0005154

epidermal growth factor receptor binding

PMID:12009895[9]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P00533

F

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

PMID:16091359[8]

ECO:0000314

direct assay evidence used in manual assertion

F

occurs_at:(SO:0001952)

Seeded From UniProt

complete

enables

GO:0017128

phospholipid scramblase activity

PMID:21873635[18]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000582979
UniProtKB:O15162
WB:WBGene00011935

F

Seeded From UniProt

complete

involved_in

GO:0017121

plasma membrane phospholipid scrambling

PMID:21873635[18]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:893575
PANTHER:PTN000582979
RGD:620521
UniProtKB:O15162
WB:WBGene00011935

P

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

PMID:21873635[18]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:893575
PANTHER:PTN000583005
RGD:620521
UniProtKB:O15162
UniProtKB:Q9NRQ2

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005794

Golgi apparatus

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0051607

defense response to virus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0051

P

Seeded From UniProt

complete

part_of

GO:0016021

integral component of membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0812

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

enables

GO:0017124

SH3 domain binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0729

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003
UniProtKB-SubCell:SL-0039

C

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472
UniProtKB-SubCell:SL-0162

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0198

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Cusick, JK et al. (2012) Identification of PLSCR1 as a protein that interacts with RELT family members. Mol. Cell. Biochem. 362 55-63 PubMed GONUTS page
  2. 2.0 2.1 2.2 Zhu, J et al. (2013) Phospholipid scramblase 1 functionally interacts with angiogenin and regulates angiogenin-enhanced rRNA transcription. Cell. Physiol. Biochem. 32 1695-706 PubMed GONUTS page
  3. Principe, S et al. (2013) In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine. Proteomics 13 1667-71 PubMed GONUTS page
  4. Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
  5. Gonzales, PA et al. (2009) Large-scale proteomics and phosphoproteomics of urinary exosomes. J. Am. Soc. Nephrol. 20 363-79 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 Wyles, JP et al. (2007) Nuclear interactions of topoisomerase II alpha and beta with phospholipid scramblase 1. Nucleic Acids Res. 35 4076-85 PubMed GONUTS page
  7. 7.0 7.1 7.2 7.3 7.4 Dong, B et al. (2004) Phospholipid scramblase 1 potentiates the antiviral activity of interferon. J. Virol. 78 8983-93 PubMed GONUTS page
  8. 8.0 8.1 Zhou, Q et al. (2005) Phospholipid scramblase 1 binds to the promoter region of the inositol 1,4,5-triphosphate receptor type 1 gene to enhance its expression. J. Biol. Chem. 280 35062-8 PubMed GONUTS page
  9. 9.0 9.1 Sun, J et al. (2002) Plasma membrane phospholipid scramblase 1 is enriched in lipid rafts and interacts with the epidermal growth factor receptor. Biochemistry 41 6338-45 PubMed GONUTS page
  10. 10.0 10.1 Py, B et al. (2009) The phospholipid scramblases 1 and 4 are cellular receptors for the secretory leukocyte protease inhibitor and interact with CD4 at the plasma membrane. PLoS ONE 4 e5006 PubMed GONUTS page
  11. 11.0 11.1 11.2 Merregaert, J et al. (2010) Phospholipid scramblase 1 is secreted by a lipid raft-dependent pathway and interacts with the extracellular matrix protein 1 in the dermal epidermal junction zone of human skin. J. Biol. Chem. 285 37823-37 PubMed GONUTS page
  12. 12.0 12.1 12.2 12.3 12.4 Zhou, Q et al. (1997) Molecular cloning of human plasma membrane phospholipid scramblase. A protein mediating transbilayer movement of plasma membrane phospholipids. J. Biol. Chem. 272 18240-4 PubMed GONUTS page
  13. 13.0 13.1 13.2 Kametaka, S et al. (2003) Identification of phospholipid scramblase 1 as a novel interacting molecule with beta -secretase (beta -site amyloid precursor protein (APP) cleaving enzyme (BACE)). J. Biol. Chem. 278 15239-45 PubMed GONUTS page
  14. 14.0 14.1 14.2 Kantari, C et al. (2007) Proteinase 3, the Wegener autoantigen, is externalized during neutrophil apoptosis: evidence for a functional association with phospholipid scramblase 1 and interference with macrophage phagocytosis. Blood 110 4086-95 PubMed GONUTS page
  15. 15.0 15.1 15.2 Frasch, SC et al. (2000) Regulation of phospholipid scramblase activity during apoptosis and cell activation by protein kinase Cdelta. J. Biol. Chem. 275 23065-73 PubMed GONUTS page
  16. 16.0 16.1 16.2 Sahu, SK et al. (2008) Over-expression of recombinant human phospholipid scramblase 1 in E. coli and its purification from inclusion bodies. Biotechnol. Lett. 30 2131-7 PubMed GONUTS page
  17. Sun, J et al. (2001) c-Abl tyrosine kinase binds and phosphorylates phospholipid scramblase 1. J. Biol. Chem. 276 28984-90 PubMed GONUTS page
  18. 18.0 18.1 18.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page