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HUMAN:PLS1
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | PLSCR1 | |
Protein Name(s) | Phospholipid scramblase 1
PL scramblase 1 Ca(2+)-dependent phospholipid scramblase 1 Erythrocyte phospholipid scramblase MmTRA1b | |
External Links | ||
UniProt | O15162 | |
EMBL | AF098642 AB006746 AF224492 AK300181 AC069528 AC116544 AK313377 CH471052 BC021100 BC032718 | |
CCDS | CCDS3135.1 | |
PIR | JE0284 | |
RefSeq | NP_066928.1 XP_005247595.1 | |
UniGene | Hs.130759 | |
PDB | 1Y2A | |
PDBsum | 1Y2A | |
ProteinModelPortal | O15162 | |
BioGrid | 111373 | |
IntAct | O15162 | |
MINT | MINT-201602 | |
STRING | 9606.ENSP00000345494 | |
TCDB | 9.A.36.1.1 | |
PhosphoSite | O15162 | |
MaxQB | O15162 | |
PaxDb | O15162 | |
PRIDE | O15162 | |
DNASU | 5359 | |
Ensembl | ENST00000342435 ENST00000448787 | |
GeneID | 5359 | |
KEGG | hsa:5359 | |
UCSC | uc003evx.4 uc011bnn.2 | |
CTD | 5359 | |
GeneCards | GC03M146232 | |
HGNC | HGNC:9092 | |
MIM | 604170 | |
neXtProt | NX_O15162 | |
PharmGKB | PA33419 | |
eggNOG | NOG119855 | |
GeneTree | ENSGT00390000002884 | |
HOGENOM | HOG000237356 | |
HOVERGEN | HBG019157 | |
InParanoid | O15162 | |
OMA | CVVGKIS | |
OrthoDB | EOG77T14X | |
PhylomeDB | O15162 | |
TreeFam | TF314939 | |
SignaLink | O15162 | |
ChiTaRS | PLSCR1 | |
EvolutionaryTrace | O15162 | |
GeneWiki | PLSCR1 | |
GenomeRNAi | 5359 | |
NextBio | 20774 | |
PRO | PR:O15162 | |
Proteomes | UP000005640 | |
Bgee | O15162 | |
CleanEx | HS_PLSCR1 | |
ExpressionAtlas | O15162 | |
Genevestigator | O15162 | |
GO | GO:0005829 GO:0031012 GO:0070062 GO:0005794 GO:0005887 GO:0016020 GO:0045121 GO:0005730 GO:0005634 GO:0005886 GO:0005509 GO:0042609 GO:0003677 GO:0019899 GO:0005154 GO:0017128 GO:0001077 GO:0017124 GO:0006953 GO:0006915 GO:0051607 GO:0045071 GO:0006659 GO:0017121 GO:0030168 GO:2000373 GO:0010628 GO:0045089 GO:0045944 GO:0060368 GO:0033003 GO:0035456 | |
InterPro | IPR005552 | |
PANTHER | PTHR23248 | |
Pfam | PF03803 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
GO:1901838 |
positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter |
ECO:0000314 |
P |
Figure 3A-F provides data proving that HeLa cells that were transiently transfected with over-expression of PLSCR1 have higher levels of 47S pre-rRNA than HeLa cells transiently transfected with a control. |
complete | |||||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
GO:0005730 |
nucleolus |
ECO:0000314 |
C |
Figure 2A-C provides data confirming that ANG is in the nucleus of Hela cells. |
complete | |||||
part_of |
GO:0070062 |
extracellular exosome |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0070062 |
extracellular exosome |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0001088) |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000373 |
positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060368 |
regulation of Fc receptor mediated stimulatory signaling pathway |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0045121 |
membrane raft |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045089 |
positive regulation of innate immune response |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045071 |
negative regulation of viral genome replication |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0042609 |
CD4 receptor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035456 |
response to interferon-beta |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033003 |
regulation of mast cell activation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030168 |
platelet activation |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0019899 |
enzyme binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0019899 |
enzyme binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0019899 |
enzyme binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0019899 |
enzyme binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0017128 |
phospholipid scramblase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0017128 |
phospholipid scramblase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0017128 |
phospholipid scramblase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_in:(CL:0000232)|occurs_in:(CL:0000233) |
Seeded From UniProt |
complete | ||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0017121 |
plasma membrane phospholipid scrambling |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0017121 |
plasma membrane phospholipid scrambling |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0017121 |
plasma membrane phospholipid scrambling |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
occurs_in:(CL:0000232)|occurs_in:(CL:0000233) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006953 |
acute-phase response |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006915 |
apoptotic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
occurs_in:(CL:0000775) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006659 |
phosphatidylserine biosynthetic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000232) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000775) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000775) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005509 |
calcium ion binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005509 |
calcium ion binding |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005154 |
epidermal growth factor receptor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0001228 |
DNA-binding transcription activator activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
occurs_at:(SO:0001952) |
Seeded From UniProt |
complete | ||
enables |
GO:0017128 |
phospholipid scramblase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000582979 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0017121 |
plasma membrane phospholipid scrambling |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:893575 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:893575 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0017124 |
SH3 domain binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Cusick, JK et al. (2012) Identification of PLSCR1 as a protein that interacts with RELT family members. Mol. Cell. Biochem. 362 55-63 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Zhu, J et al. (2013) Phospholipid scramblase 1 functionally interacts with angiogenin and regulates angiogenin-enhanced rRNA transcription. Cell. Physiol. Biochem. 32 1695-706 PubMed GONUTS page
- ↑ Principe, S et al. (2013) In-depth proteomic analyses of exosomes isolated from expressed prostatic secretions in urine. Proteomics 13 1667-71 PubMed GONUTS page
- ↑ Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
- ↑ Gonzales, PA et al. (2009) Large-scale proteomics and phosphoproteomics of urinary exosomes. J. Am. Soc. Nephrol. 20 363-79 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 Wyles, JP et al. (2007) Nuclear interactions of topoisomerase II alpha and beta with phospholipid scramblase 1. Nucleic Acids Res. 35 4076-85 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 7.4 Dong, B et al. (2004) Phospholipid scramblase 1 potentiates the antiviral activity of interferon. J. Virol. 78 8983-93 PubMed GONUTS page
- ↑ 8.0 8.1 Zhou, Q et al. (2005) Phospholipid scramblase 1 binds to the promoter region of the inositol 1,4,5-triphosphate receptor type 1 gene to enhance its expression. J. Biol. Chem. 280 35062-8 PubMed GONUTS page
- ↑ 9.0 9.1 Sun, J et al. (2002) Plasma membrane phospholipid scramblase 1 is enriched in lipid rafts and interacts with the epidermal growth factor receptor. Biochemistry 41 6338-45 PubMed GONUTS page
- ↑ 10.0 10.1 Py, B et al. (2009) The phospholipid scramblases 1 and 4 are cellular receptors for the secretory leukocyte protease inhibitor and interact with CD4 at the plasma membrane. PLoS ONE 4 e5006 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 Merregaert, J et al. (2010) Phospholipid scramblase 1 is secreted by a lipid raft-dependent pathway and interacts with the extracellular matrix protein 1 in the dermal epidermal junction zone of human skin. J. Biol. Chem. 285 37823-37 PubMed GONUTS page
- ↑ 12.0 12.1 12.2 12.3 12.4 Zhou, Q et al. (1997) Molecular cloning of human plasma membrane phospholipid scramblase. A protein mediating transbilayer movement of plasma membrane phospholipids. J. Biol. Chem. 272 18240-4 PubMed GONUTS page
- ↑ 13.0 13.1 13.2 Kametaka, S et al. (2003) Identification of phospholipid scramblase 1 as a novel interacting molecule with beta -secretase (beta -site amyloid precursor protein (APP) cleaving enzyme (BACE)). J. Biol. Chem. 278 15239-45 PubMed GONUTS page
- ↑ 14.0 14.1 14.2 Kantari, C et al. (2007) Proteinase 3, the Wegener autoantigen, is externalized during neutrophil apoptosis: evidence for a functional association with phospholipid scramblase 1 and interference with macrophage phagocytosis. Blood 110 4086-95 PubMed GONUTS page
- ↑ 15.0 15.1 15.2 Frasch, SC et al. (2000) Regulation of phospholipid scramblase activity during apoptosis and cell activation by protein kinase Cdelta. J. Biol. Chem. 275 23065-73 PubMed GONUTS page
- ↑ 16.0 16.1 16.2 Sahu, SK et al. (2008) Over-expression of recombinant human phospholipid scramblase 1 in E. coli and its purification from inclusion bodies. Biotechnol. Lett. 30 2131-7 PubMed GONUTS page
- ↑ Sun, J et al. (2001) c-Abl tyrosine kinase binds and phosphorylates phospholipid scramblase 1. J. Biol. Chem. 276 28984-90 PubMed GONUTS page
- ↑ 18.0 18.1 18.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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- GO:0048471 ! perinuclear region of cytoplasm
- GO:0006659 ! phosphatidylserine biosynthetic process
- GO:0017128 ! phospholipid scramblase activity
- GO:0005886 ! plasma membrane
- GO:0017121 ! plasma membrane phospholipid scrambling
- GO:0030168 ! platelet activation
- GO:1901838 ! positive regulation of transcription of nucleolar large rRNA by RNA polymerase I
- GO:2000373 ! positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity
- GO:0010628 ! positive regulation of gene expression
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0045089 ! positive regulation of innate immune response
- Primates
r