GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

HUMAN:EIF3A

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) EIF3A (ECO:0000255 with HAMAP-Rule:MF_03000) (synonyms: EIF3S10 (ECO:0000255 with HAMAP-Rule:MF_03000), KIAA0139)
Protein Name(s) Eukaryotic translation initiation factor 3 subunit A (ECO:0000255 with HAMAP-Rule:MF_03000)

eIF3a (ECO:0000255 with HAMAP-Rule:MF_03000) Eukaryotic translation initiation factor 3 subunit 10 (ECO:0000255 with HAMAP-Rule:MF_03000) eIF-3-theta (ECO:0000255 with HAMAP-Rule:MF_03000) eIF3 p167 eIF3 p180 eIF3 p185

External Links
UniProt Q14152
EMBL U58046
U58047
U78311
D50929
AK302575
AL355598
CH471066
CCDS CCDS7608.1
RefSeq NP_003741.1
UniGene Hs.523299
Hs.713331
PDB 3J8B
3J8C
PDBsum 3J8B
3J8C
ProteinModelPortal Q14152
BioGrid 114210
DIP DIP-31114N
IntAct Q14152
MINT MINT-1519859
STRING 9606.ENSP00000358140
iPTMnet Q14152
PhosphoSite Q14152
SwissPalm Q14152
BioMuta EIF3A
DMDM 6685537
UCD-2DPAGE Q14152
EPD Q14152
MaxQB Q14152
PaxDb Q14152
PeptideAtlas Q14152
PRIDE Q14152
Ensembl ENST00000369144
ENST00000541549
GeneID 8661
KEGG hsa:8661
UCSC uc001ldu.4
CTD 8661
GeneCards EIF3A
H-InvDB HIX0170434
HGNC HGNC:3271
HPA HPA038315
HPA038316
MIM 602039
neXtProt NX_Q14152
PharmGKB PA27699
eggNOG KOG2072
ENOG410XQ37
GeneTree ENSGT00730000111063
HOGENOM HOG000246822
HOVERGEN HBG006128
InParanoid Q14152
KO K03254
OMA AREDSWG
OrthoDB EOG7BGHKJ
PhylomeDB Q14152
TreeFam TF101522
Reactome R-HSA-156827
R-HSA-72649
R-HSA-72689
R-HSA-72695
R-HSA-72702
R-HSA-72706
ChiTaRS EIF3A
GeneWiki EIF3A
GenomeRNAi 8661
NextBio 32483
PRO PR:Q14152
Proteomes UP000005640
Bgee Q14152
CleanEx HS_EIF3A
Genevisible Q14152
GO GO:0005737
GO:0005829
GO:0016282
GO:0033290
GO:0005852
GO:0071541
GO:0016020
GO:0005730
GO:0005634
GO:0044822
GO:0005198
GO:0003743
GO:0044267
GO:0001732
GO:0001731
GO:0010467
GO:0006446
GO:0006412
GO:0006413
HAMAP MF_03000
InterPro IPR027512
IPR000717
Pfam PF01399
SMART SM00088

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0003723

RNA binding

PMID:27462815[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:25849773[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

contributes_to

GO:0003743

translation initiation factor activity

PMID:25849773[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005852

eukaryotic translation initiation factor 3 complex

PMID:25849773[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0075522

IRES-dependent viral translational initiation

PMID:9573242[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0075525

viral translational termination-reinitiation

PMID:21347434[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0075522

IRES-dependent viral translational initiation

PMID:24357634[5]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0075522

IRES-dependent viral translational initiation

PMID:23766293[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0016020

membrane

PMID:19946888[7]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:22681889[8]

ECO:0007005

high throughput direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

PMID:22658674[9]

ECO:0007005

high throughput direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006413

translational initiation

PMID:17322308[10]

ECO:0000305

curator inference used in manual assertion

GO:0005852

P

Seeded From UniProt

complete

involved_in

GO:0006413

translational initiation

PMID:18599441[11]

ECO:0000305

curator inference used in manual assertion

GO:0005852

P

Seeded From UniProt

complete

part_of

GO:0005852

eukaryotic translation initiation factor 3 complex

PMID:17322308[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005852

eukaryotic translation initiation factor 3 complex

PMID:17581632[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005852

eukaryotic translation initiation factor 3 complex

PMID:18599441[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:9150439[13]

ECO:0000303

author statement without traceable support used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0005198

structural molecule activity

PMID:9150439[13]

ECO:0000303

author statement without traceable support used in manual assertion

F

Seeded From UniProt

complete

contributes_to

GO:0003743

translation initiation factor activity

PMID:17581632[12]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

contributes_to

GO:0003743

translation initiation factor activity

PMID:17322308[10]

ECO:0000305

curator inference used in manual assertion

GO:0005852

F

Seeded From UniProt

complete

contributes_to

GO:0003743

translation initiation factor activity

PMID:18599441[11]

ECO:0000305

curator inference used in manual assertion

GO:0005852

F

Seeded From UniProt

complete

involved_in

GO:0001732

formation of cytoplasmic translation initiation complex

PMID:17581632[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0071541

eukaryotic translation initiation factor 3 complex, eIF3m

PMID:21873635[14]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95301
PANTHER:PTN000360893
PomBase:SPBC17D11.05

C

Seeded From UniProt

complete

part_of

GO:0071540

eukaryotic translation initiation factor 3 complex, eIF3e

PMID:21873635[14]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000360893
PomBase:SPBC17D11.05

C

Seeded From UniProt

complete

part_of

GO:0043614

multi-eIF complex

PMID:21873635[14]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000360893
SGD:S000000283

C

Seeded From UniProt

complete

contributes_to

GO:0003743

translation initiation factor activity

PMID:21873635[14]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95301
PANTHER:PTN000360893
SGD:S000000283
UniProtKB:Q14152

F

Seeded From UniProt

complete

enables

GO:0003729

mRNA binding

PMID:21873635[14]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000360893
TAIR:locus:2123076

F

Seeded From UniProt

complete

involved_in

GO:0002188

translation reinitiation

PMID:21873635[14]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000360893
SGD:S000000283

P

Seeded From UniProt

complete

involved_in

GO:0001732

formation of cytoplasmic translation initiation complex

PMID:21873635[14]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:95301
PANTHER:PTN000360893
UniProtKB:Q14152

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005730

nucleolus

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0071541

eukaryotic translation initiation factor 3 complex, eIF3m

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P23116
ensembl:ENSMUSP00000025955

C

Seeded From UniProt

complete

part_of

GO:0014069

postsynaptic density

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P23116
ensembl:ENSMUSP00000025955

C

Seeded From UniProt

complete

part_of

GO:0005852

eukaryotic translation initiation factor 3 complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P23116
ensembl:ENSMUSP00000025955

C

Seeded From UniProt

complete

enables

GO:0003743

translation initiation factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P23116
ensembl:ENSMUSP00000025955

F

Seeded From UniProt

complete

involved_in

GO:0001732

formation of cytoplasmic translation initiation complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P23116
ensembl:ENSMUSP00000025955

P

Seeded From UniProt

complete

involved_in

GO:0070373

negative regulation of ERK1 and ERK2 cascade

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q1JU68
ensembl:ENSRNOP00000063484

P

Seeded From UniProt

complete

enables

GO:0030971

receptor tyrosine kinase binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q1JU68
ensembl:ENSRNOP00000063484

F

Seeded From UniProt

complete

part_of

GO:0005874

microtubule

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q1JU68
ensembl:ENSRNOP00000063484

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q1JU68
ensembl:ENSRNOP00000063484

C

Seeded From UniProt

complete

part_of

GO:0005852

eukaryotic translation initiation factor 3 complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR027512

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000106208

C

Seeded From UniProt

complete

part_of

GO:0016282

eukaryotic 43S preinitiation complex

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000106208

C

Seeded From UniProt

complete

involved_in

GO:0002183

cytoplasmic translational initiation

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000106208

P

Seeded From UniProt

complete

part_of

GO:0005852

eukaryotic translation initiation factor 3 complex

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000106208

C

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000106208

F

Seeded From UniProt

complete

part_of

GO:0033290

eukaryotic 48S preinitiation complex

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000106208

C

Seeded From UniProt

complete

involved_in

GO:0001732

formation of cytoplasmic translation initiation complex

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000106208

P

Seeded From UniProt

complete

enables

GO:0003743

translation initiation factor activity

GO_REF:0000104

ECO:0000256

match to sequence model evidence used in automatic assertion

UniRule:UR000106208

F

Seeded From UniProt

complete

involved_in

GO:0006413

translational initiation

Reactome:R-HSA-72613

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

Reactome:R-HSA-72697
Reactome:R-HSA-72691
Reactome:R-HSA-72676
Reactome:R-HSA-72621
Reactome:R-HSA-72619
Reactome:R-HSA-157849
Reactome:R-HSA-156823
Reactome:R-HSA-156808

ECO:0000304

author statement supported by traceable reference used in manual assertion








C

Seeded From UniProt

complete

enables

GO:0003743

translation initiation factor activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0396

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

involved_in

GO:0006412

translation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0648

P

Seeded From UniProt

complete

enables

GO:0003723

RNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0694

F

Seeded From UniProt

complete

involved_in

GO:0006413

translational initiation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0396

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. Lee, AS et al. (2016) eIF3d is an mRNA cap-binding protein that is required for specialized translation initiation. Nature 536 96-9 PubMed GONUTS page
  2. 2.0 2.1 2.2 Lee, AS et al. (2015) eIF3 targets cell-proliferation messenger RNAs for translational activation or repression. Nature 522 111-4 PubMed GONUTS page
  3. Sizova, DV et al. (1998) Specific interaction of eukaryotic translation initiation factor 3 with the 5' nontranslated regions of hepatitis C virus and classical swine fever virus RNAs. J. Virol. 72 4775-82 PubMed GONUTS page
  4. Powell, ML et al. (2011) Further characterisation of the translational termination-reinitiation signal of the influenza B virus segment 7 RNA. PLoS ONE 6 e16822 PubMed GONUTS page
  5. Sweeney, TR et al. (2014) The mechanism of translation initiation on Type 1 picornavirus IRESs. EMBO J. 33 76-92 PubMed GONUTS page
  6. Sun, C et al. (2013) Two RNA-binding motifs in eIF3 direct HCV IRES-dependent translation. Nucleic Acids Res. 41 7512-21 PubMed GONUTS page
  7. Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
  8. Baltz, AG et al. (2012) The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Mol. Cell 46 674-90 PubMed GONUTS page
  9. Castello, A et al. (2012) Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. Cell 149 1393-406 PubMed GONUTS page
  10. 10.0 10.1 10.2 Damoc, E et al. (2007) Structural characterization of the human eukaryotic initiation factor 3 protein complex by mass spectrometry. Mol. Cell Proteomics 6 1135-46 PubMed GONUTS page
  11. 11.0 11.1 11.2 Zhou, M et al. (2008) Mass spectrometry reveals modularity and a complete subunit interaction map of the eukaryotic translation factor eIF3. Proc. Natl. Acad. Sci. U.S.A. 105 18139-44 PubMed GONUTS page
  12. 12.0 12.1 12.2 Masutani, M et al. (2007) Reconstitution reveals the functional core of mammalian eIF3. EMBO J. 26 3373-83 PubMed GONUTS page
  13. 13.0 13.1 Scholler, JK & Kanner, SB (1997) The human p167 gene encodes a unique structural protein that contains centrosomin A homology and associates with a multicomponent complex. DNA Cell Biol. 16 515-31 PubMed GONUTS page
  14. 14.0 14.1 14.2 14.3 14.4 14.5 14.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page