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HUMAN:ARF
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | CDKN2A (ECO:0000312 with EMBL:AAM77919.1, ECO:0000312 with HGNC:HGNC:1787) (synonyms: CDKN2 (ECO:0000312 with EMBL:AAC60649.1), MLM) | |
Protein Name(s) | Tumor suppressor ARF (ECO:0000305)
Alternative reading frame (ECO:0000303 with PMID:9724636[1]) ARF (ECO:0000303 with PMID:9724636[1]) Cyclin-dependent kinase inhibitor 2A (ECO:0000312 with HGNC:HGNC:1787) p14ARF (ECO:0000303 with PMID:9724636[1]) | |
External Links | ||
UniProt | Q8N726 | |
EMBL | S78535 U38945 AF527803 AL449423 CH471071 CH471071 BC015960 BC021998 U26727 BT007020 | |
CCDS | CCDS6511.2 | |
PIR | I39004 | |
RefSeq | NP_478102.2 | |
UniGene | Hs.512599 | |
ProteinModelPortal | Q8N726 | |
SMR | Q8N726 | |
BioGrid | 107463 | |
CORUM | Q8N726 | |
DIP | DIP-24171N | |
IntAct | Q8N726 | |
MINT | Q8N726 | |
iPTMnet | Q8N726 | |
BioMuta | UBR5 | |
DMDM | 384872321 | |
MaxQB | Q8N726 | |
PeptideAtlas | Q8N726 | |
PRIDE | Q8N726 | |
ProteomicsDB | 72258 | |
DNASU | 1029 | |
Ensembl | ENST00000530628 ENST00000579755 | |
GeneID | 1029 | |
UCSC | uc003zpl.4 | |
CTD | 1029 | |
DisGeNET | 1029 | |
EuPathDB | HostDB:ENSG00000147889.16 | |
GeneCards | CDKN2A | |
HGNC | HGNC:1787 | |
HPA | CAB000093 CAB000445 CAB018232 HPA047838 | |
MalaCards | CDKN2A | |
MIM | 600160 | |
neXtProt | NX_Q8N726 | |
OpenTargets | ENSG00000147889 | |
PharmGKB | PA106 | |
GeneTree | ENSGT00390000004527 | |
HOGENOM | HOG000111485 | |
HOVERGEN | HBG071056 | |
Reactome | R-HSA-2559580 R-HSA-2559585 R-HSA-3108214 R-HSA-3232118 R-HSA-6804757 R-HSA-69541 R-HSA-8941858 | |
SIGNOR | Q8N726 | |
ChiTaRS | CDKN2A | |
GenomeRNAi | 1029 | |
Proteomes | UP000005640 | |
Bgee | ENSG00000147889 | |
CleanEx | HS_CDKN2A | |
ExpressionAtlas | Q8N726 | |
Genevisible | Q8N726 | |
GO | GO:0005739 GO:0005730 GO:0005654 GO:0005634 GO:0032991 GO:0097718 GO:0003677 GO:0097371 GO:0002039 GO:0019789 GO:0008134 GO:1990948 GO:0055105 GO:0006919 GO:1990000 GO:0008637 GO:0000422 GO:0007050 GO:0090398 GO:0051882 GO:0030889 GO:0008285 GO:0033088 GO:0006469 GO:2000435 GO:1903051 GO:1904667 GO:2000059 GO:0051444 GO:0043065 GO:0071158 GO:0043517 GO:0010628 GO:1900182 GO:0033235 GO:1901798 GO:0045944 GO:0045893 GO:0031648 GO:0070534 GO:0000209 GO:0050821 GO:1902510 GO:0010389 GO:0046825 GO:0031647 GO:1903214 GO:0006364 GO:0048103 GO:0006351 | |
InterPro | IPR010868 | |
Pfam | PF07392 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:2000435 |
negative regulation of protein neddylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1904667 |
negative regulation of ubiquitin protein ligase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000059 |
negative regulation of ubiquitin-dependent protein catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:1990948 |
ubiquitin ligase inhibitor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:1990000 |
amyloid fibril formation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0097718 |
disordered domain specific binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050821 |
protein stabilization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043065 |
positive regulation of apoptotic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1902510 |
regulation of apoptotic DNA fragmentation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090398 |
cellular senescence |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0055105 |
ubiquitin-protein transferase inhibitor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051444 |
negative regulation of ubiquitin-protein transferase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048103 |
somatic stem cell division |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033235 |
positive regulation of protein sumoylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033088 |
negative regulation of immature T cell proliferation in thymus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0031648 |
protein destabilization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0031647 |
regulation of protein stability |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030889 |
negative regulation of B cell proliferation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010389 |
regulation of G2/M transition of mitotic cell cycle |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008637 |
apoptotic mitochondrial changes |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007050 |
cell cycle arrest |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006919 |
activation of cysteine-type endopeptidase activity involved in apoptotic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006469 |
negative regulation of protein kinase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070534 |
protein K63-linked ubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008285 |
negative regulation of cell population proliferation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000209 |
protein polyubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0019789 |
SUMO transferase activity |
ECO:0000269 |
experimental evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016925 |
protein sumoylation |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0019789 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006915 |
apoptotic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007050 |
cell cycle arrest |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008285 |
negative regulation of cell population proliferation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1900182 |
positive regulation of protein localization to nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1901798 |
positive regulation of signal transduction by p53 class mediator |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000059 |
negative regulation of ubiquitin-dependent protein catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0097371 |
MDM2/MDM4 family protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0097371 |
MDM2/MDM4 family protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071158 |
positive regulation of cell cycle arrest |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050821 |
protein stabilization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050821 |
protein stabilization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046825 |
regulation of protein export from nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043517 |
positive regulation of DNA damage response, signal transduction by p53 class mediator |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0031648 |
protein destabilization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0016604 |
nuclear body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0002039 |
p53 binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:1903214 |
regulation of protein targeting to mitochondrion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:O60260) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1903051 |
negative regulation of proteolysis involved in cellular protein catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:Q9BXM7) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000422 |
autophagy of mitochondrion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0051882 |
mitochondrial depolarization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-6804998 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0006364 |
rRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006915 |
apoptotic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007049 |
cell cycle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Stott, FJ et al. (1998) The alternative product from the human CDKN2A locus, p14(ARF), participates in a regulatory feedback loop with p53 and MDM2. EMBO J. 17 5001-14 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 Horn, HF & Vousden, KH (2008) Cooperation between the ribosomal proteins L5 and L11 in the p53 pathway. Oncogene 27 5774-84 PubMed GONUTS page
- ↑ 3.0 3.1 Bothner, B et al. (2003) Peptides derived from two dynamically disordered proteins self-assemble into amyloid-like fibrils. J. Am. Chem. Soc. 125 3200-1 PubMed GONUTS page
- ↑ Lee, S et al. (2017) GLTSCR2 promotes the nucleoplasmic translocation and subsequent degradation of nucleolar ARF. Oncotarget 8 16293-16302 PubMed GONUTS page
- ↑ 5.0 5.1 Chen, D et al. (2007) Ribosomal protein S7 as a novel modulator of p53-MDM2 interaction: binding to MDM2, stabilization of p53 protein, and activation of p53 function. Oncogene 26 5029-37 PubMed GONUTS page
- ↑ 6.0 6.1 Watari, A et al. (2012) A novel proapoptotic gene PANO encodes a post-translational modulator of the tumor suppressor p14ARF. Exp. Cell Res. 318 187-95 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 Hemmati, PG et al. (2002) Adenovirus-mediated overexpression of p14(ARF) induces p53 and Bax-independent apoptosis. Oncogene 21 3149-61 PubMed GONUTS page
- ↑ Shamanin, VA & Androphy, EJ (2004) Immortalization of human mammary epithelial cells is associated with inactivation of the p14ARF-p53 pathway. Mol. Cell. Biol. 24 2144-52 PubMed GONUTS page
- ↑ 9.0 9.1 Yu, J et al. (2009) PTEN regulation by Akt-EGR1-ARF-PTEN axis. EMBO J. 28 21-33 PubMed GONUTS page
- ↑ 10.0 10.1 10.2 10.3 10.4 10.5 10.6 10.7 Zhang, Y et al. (1998) ARF promotes MDM2 degradation and stabilizes p53: ARF-INK4a locus deletion impairs both the Rb and p53 tumor suppression pathways. Cell 92 725-34 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 Normand, G et al. (2005) p14ARF induces G2 cell cycle arrest in p53- and p21-deficient cells by down-regulating p34cdc2 kinase activity. J. Biol. Chem. 280 7118-30 PubMed GONUTS page
- ↑ 12.0 12.1 Tompkins, VS et al. (2007) A novel nuclear interactor of ARF and MDM2 (NIAM) that maintains chromosomal stability. J. Biol. Chem. 282 1322-33 PubMed GONUTS page
- ↑ Korshunov, A & Golanov, A (2002) Immunohistochemical analysis of p18INK4C and p14ARF protein expression in 117 oligodendrogliomas: correlation with tumor grade and clinical outcome. Arch. Pathol. Lab. Med. 126 42-8 PubMed GONUTS page
- ↑ 14.0 14.1 14.2 14.3 Huang, Y et al. (2008) Tumor suppressor ARF promotes non-classic proteasome-independent polyubiquitination of COMMD1. J. Biol. Chem. 283 11453-60 PubMed GONUTS page
- ↑ 15.0 15.1 15.2 Zhou, Y et al. (2007) Activation of p53 by MEG3 non-coding RNA. J. Biol. Chem. 282 24731-42 PubMed GONUTS page
- ↑ Woods, YL et al. (2004) p14 Arf promotes small ubiquitin-like modifier conjugation of Werners helicase. J. Biol. Chem. 279 50157-66 PubMed GONUTS page
- ↑ 17.0 17.1 17.2 17.3 17.4 Wang, J et al. (2006) A novel ARF-binding protein (LZAP) alters ARF regulation of HDM2. Biochem. J. 393 489-501 PubMed GONUTS page
- ↑ 18.0 18.1 18.2 18.3 18.4 Zhang, Y & Xiong, Y (1999) Mutations in human ARF exon 2 disrupt its nucleolar localization and impair its ability to block nuclear export of MDM2 and p53. Mol. Cell 3 579-91 PubMed GONUTS page
- ↑ 19.0 19.1 19.2 19.3 19.4 Grenier, K et al. (2014) Short mitochondrial ARF triggers Parkin/PINK1-dependent mitophagy. J. Biol. Chem. 289 29519-30 PubMed GONUTS page
a
c
m
n
- GO:0008285 ! negative regulation of cell population proliferation
- GO:1903051 ! negative regulation of proteolysis involved in protein catabolic process
- GO:1904667 ! negative regulation of ubiquitin protein ligase activity
- GO:2000435 ! negative regulation of protein neddylation
- GO:0033088 ! negative regulation of immature T cell proliferation in thymus
- GO:2000059 ! negative regulation of ubiquitin-dependent protein catabolic process
- GO:0030889 ! negative regulation of B cell proliferation
- GO:0006469 ! negative regulation of protein kinase activity
- GO:0051444 ! negative regulation of ubiquitin-protein transferase activity
- GO:0016604 ! nuclear body
- GO:0005730 ! nucleolus
- GO:0005654 ! nucleoplasm
- GO:0005634 ! nucleus
p
- GO:0002039 ! p53 binding
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0043065 ! positive regulation of apoptotic process
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0010628 ! positive regulation of gene expression
- GO:0033235 ! positive regulation of protein sumoylation
- GO:0043517 ! positive regulation of DNA damage response, signal transduction by p53 class mediator
- GO:0071158 ! positive regulation of cell cycle arrest
- GO:1901798 ! positive regulation of signal transduction by p53 class mediator
- GO:1900182 ! positive regulation of protein localization to nucleus
- Primates
- GO:0032991 ! protein-containing complex
- GO:0031648 ! protein destabilization
- GO:0070534 ! protein K63-linked ubiquitination
- GO:0000209 ! protein polyubiquitination
- GO:0050821 ! protein stabilization
- GO:0016925 ! protein sumoylation
r
- GO:1902510 ! regulation of apoptotic DNA fragmentation
- GO:0031647 ! regulation of protein stability
- GO:1903214 ! regulation of protein targeting to mitochondrion
- GO:0046825 ! regulation of protein export from nucleus
- GO:0010389 ! regulation of G2/M transition of mitotic cell cycle
- GO:0006364 ! rRNA processing
u