GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
HUMAN:ANM5
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | PRMT5 (synonyms: HRMT1L5, IBP72, JBP1, SKB1) | |
Protein Name(s) | Protein arginine N-methyltransferase 5
72 kDa ICln-binding protein Histone-arginine N-methyltransferase PRMT5 Jak-binding protein 1 Shk1 kinase-binding protein 1 homolog SKB1 homolog SKB1Hs Protein arginine N-methyltransferase 5, N-terminally processed | |
External Links | ||
UniProt | O14744 | |
EMBL | AF015913 AF167572 AK075251 AK301812 AK302240 CR456741 AB451246 AB451370 AL132780 CH471078 CH471078 CH471078 CH471078 BC005820 BC025979 | |
CCDS | CCDS41922.1 CCDS61394.1 CCDS61395.1 CCDS61396.1 CCDS9579.1 | |
PIR | T03842 | |
RefSeq | NP_001034708.1 NP_001269882.1 NP_001269884.1 NP_001269885.1 NP_006100.2 | |
UniGene | Hs.367854 | |
PDB | 4GQB | |
PDBsum | 4GQB | |
ProteinModelPortal | O14744 | |
SMR | O14744 | |
BioGrid | 115688 | |
DIP | DIP-33172N | |
IntAct | O14744 | |
MINT | MINT-1216859 | |
STRING | 9606.ENSP00000319169 | |
BindingDB | O14744 | |
ChEMBL | CHEMBL1795116 | |
PhosphoSite | O14744 | |
MaxQB | O14744 | |
PaxDb | O14744 | |
PeptideAtlas | O14744 | |
PRIDE | O14744 | |
DNASU | 10419 | |
Ensembl | ENST00000216350 ENST00000324366 ENST00000397440 ENST00000397441 ENST00000553897 | |
GeneID | 10419 | |
KEGG | hsa:10419 | |
UCSC | uc001whl.1 uc001whm.1 uc001whn.1 | |
CTD | 10419 | |
GeneCards | GC14M023389 | |
H-InvDB | HIX0011525 | |
HGNC | HGNC:10894 | |
HPA | CAB012459 HPA005525 | |
MIM | 604045 | |
neXtProt | NX_O14744 | |
PharmGKB | PA35794 | |
eggNOG | NOG291156 | |
GeneTree | ENSGT00390000001141 | |
HOGENOM | HOG000175933 | |
HOVERGEN | HBG057083 | |
InParanoid | O14744 | |
KO | K02516 | |
OMA | SIPCSYT | |
OrthoDB | EOG7X6KZR | |
PhylomeDB | O14744 | |
TreeFam | TF300626 | |
Reactome | REACT_11066 REACT_228108 | |
ChiTaRS | PRMT5 | |
GeneWiki | Protein_arginine_methyltransferase_5 | |
GenomeRNAi | 10419 | |
NextBio | 35464858 | |
PRO | PR:O14744 | |
Proteomes | UP000005640 | |
Bgee | O14744 | |
CleanEx | HS_PRMT5 | |
ExpressionAtlas | O14744 | |
Genevestigator | O14744 | |
GO | GO:0005737 GO:0005829 GO:0034709 GO:0005634 GO:0003682 GO:0001046 GO:0008469 GO:0008168 GO:0035243 GO:0043021 GO:0003714 GO:0008283 GO:0032922 GO:0042118 GO:0010467 GO:0043985 GO:0034660 GO:0000122 GO:0018216 GO:0019918 GO:0035246 GO:0007088 GO:0006355 GO:0016070 GO:0000387 GO:0006351 | |
Gene3D | 3.40.50.150 | |
InterPro | IPR025799 IPR007857 IPR029063 | |
PANTHER | PTHR10738 | |
Pfam | PF05185 | |
PIRSF | PIRSF015894 | |
SUPFAM | SSF53335 | |
PROSITE | PS51678 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0005737 |
cytoplasm |
ECO:0000314 |
C |
Figure 1 shows PRMT5 localized in the cytoplasm |
complete | |||||
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0002039 |
p53 binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1904992 |
positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016274 |
protein-arginine N-methyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_input:(UniProtKB:P14416) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035246 |
peptidyl-arginine N-methylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0044020 |
histone methyltransferase activity (H4-R3 specific) |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0034709 |
methylosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008327 |
methyl-CpG binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006353 |
DNA-templated transcription, termination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0035097 |
histone methyltransferase complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090161 |
Golgi ribbon formation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016274 |
protein-arginine N-methyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003714 |
transcription corepressor activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043985 |
histone H4-R3 methylation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032922 |
circadian regulation of gene expression |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043985 |
histone H4-R3 methylation |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043021 |
ribonucleoprotein complex binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042118 |
endothelial cell activation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035243 |
protein-arginine omega-N symmetric methyltransferase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0034709 |
methylosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0018216 |
peptidyl-arginine methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000303 |
author statement without traceable support used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000387 |
spliceosomal snRNP assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034969 |
histone arginine methylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000077429 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008469 |
histone-arginine N-methyltransferase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000077429 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000077429 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1351645 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0035243 |
protein-arginine omega-N symmetric methyltransferase activity |
ECO:0000269 |
experimental evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035246 |
peptidyl-arginine N-methylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0019918 |
peptidyl-arginine methylation, to symmetrical-dimethyl arginine |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0035243 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019918 |
peptidyl-arginine methylation, to symmetrical-dimethyl arginine |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0035243 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1903507 |
negative regulation of nucleic acid-templated transcription |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0003714 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0097421 |
liver regeneration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A0E8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070372 |
regulation of ERK1 and ERK2 cascade |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A0E8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048714 |
positive regulation of oligodendrocyte differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A0E8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045596 |
negative regulation of cell differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A0E8 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0044877 |
protein-containing complex binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A0E8 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0044030 |
regulation of DNA methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A0E8 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A0E8 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006479 |
protein methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:D4A0E8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006479 |
protein methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035246 |
peptidyl-arginine N-methylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007088 |
regulation of mitotic nuclear division |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1901796 |
regulation of signal transduction by p53 class mediator |
Reactome:R-HSA-5633007 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008469 |
histone-arginine N-methyltransferase activity |
Reactome:R-HSA-5661117 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
F |
Seeded From UniProt |
complete | |
part_of |
GO:0005829 |
cytosol |
Reactome:R-HSA-191790 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-HSA-6804383 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0000387 |
spliceosomal snRNP assembly |
Reactome:R-HSA-191790 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008168 |
methyltransferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048511 |
rhythmic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032259 |
methylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gu, Z et al. (2012) Protein arginine methyltransferase 5 functions in opposite ways in the cytoplasm and nucleus of prostate cancer cells. PLoS ONE 7 e44033 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Jansson, M et al. (2008) Arginine methylation regulates the p53 response. Nat. Cell Biol. 10 1431-9 PubMed GONUTS page
- ↑ 3.0 3.1 Guderian, G et al. (2011) RioK1, a new interactor of protein arginine methyltransferase 5 (PRMT5), competes with pICln for binding and modulates PRMT5 complex composition and substrate specificity. J. Biol. Chem. 286 1976-86 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Likhite, N et al. (2015) The protein arginine methyltransferase PRMT5 promotes D2-like dopamine receptor signaling. Sci Signal 8 ra115 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Takai, H et al. (2014) 5-Hydroxymethylcytosine plays a critical role in glioblastomagenesis by recruiting the CHTOP-methylosome complex. Cell Rep 9 48-60 PubMed GONUTS page
- ↑ Zhao, DY et al. (2016) SMN and symmetric arginine dimethylation of RNA polymerase II C-terminal domain control termination. Nature 529 48-53 PubMed GONUTS page
- ↑ Chittka, A et al. (2012) Transcription factor positive regulatory domain 4 (PRDM4) recruits protein arginine methyltransferase 5 (PRMT5) to mediate histone arginine methylation and control neural stem cell proliferation and differentiation. J. Biol. Chem. 287 42995-3006 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 Zhou, Z et al. (2010) PRMT5 regulates Golgi apparatus structure through methylation of the golgin GM130. Cell Res. 20 1023-33 PubMed GONUTS page
- ↑ 9.0 9.1 Lacroix, M et al. (2008) The histone-binding protein COPR5 is required for nuclear functions of the protein arginine methyltransferase PRMT5. EMBO Rep. 9 452-8 PubMed GONUTS page
- ↑ 10.0 10.1 10.2 10.3 Gonsalvez, GB et al. (2007) Two distinct arginine methyltransferases are required for biogenesis of Sm-class ribonucleoproteins. J. Cell Biol. 178 733-40 PubMed GONUTS page
- ↑ Bandyopadhyay, S et al. (2012) HOXA9 methylation by PRMT5 is essential for endothelial cell expression of leukocyte adhesion molecules. Mol. Cell. Biol. 32 1202-13 PubMed GONUTS page
- ↑ 12.0 12.1 Chari, A et al. (2008) An assembly chaperone collaborates with the SMN complex to generate spliceosomal SnRNPs. Cell 135 497-509 PubMed GONUTS page
- ↑ 13.0 13.1 13.2 13.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Fronz, K et al. (2008) Promiscuous modification of the nuclear poly(A)-binding protein by multiple protein-arginine methyltransferases does not affect the aggregation behavior. J. Biol. Chem. 283 20408-20 PubMed GONUTS page
- ↑ 15.0 15.1 Miranda, TB et al. (2004) Spliceosome Sm proteins D1, D3, and B/B' are asymmetrically dimethylated at arginine residues in the nucleus. Biochem. Biophys. Res. Commun. 323 382-7 PubMed GONUTS page
- ↑ Antonysamy, S et al. (2012) Crystal structure of the human PRMT5:MEP50 complex. Proc. Natl. Acad. Sci. U.S.A. 109 17960-5 PubMed GONUTS page
- ↑ Hegele, A et al. (2012) Dynamic protein-protein interaction wiring of the human spliceosome. Mol. Cell 45 567-80 PubMed GONUTS page
- ↑ Friesen, WJ et al. (2002) A novel WD repeat protein component of the methylosome binds Sm proteins. J. Biol. Chem. 277 8243-7 PubMed GONUTS page
- ↑ Gilbreth, M et al. (1998) Negative regulation of mitosis in fission yeast by the shk1 interacting protein skb1 and its human homolog, Skb1Hs. Proc. Natl. Acad. Sci. U.S.A. 95 14781-6 PubMed GONUTS page
c
e
h
m
n
o
p
- GO:0002039 ! p53 binding
- GO:0035246 ! peptidyl-arginine N-methylation
- GO:0018216 ! peptidyl-arginine methylation
- GO:0019918 ! peptidyl-arginine methylation, to symmetrical-dimethyl arginine
- GO:1904992 ! positive regulation of adenylate cyclase-inhibiting dopamine receptor signaling pathway
- GO:0048714 ! positive regulation of oligodendrocyte differentiation
- Primates
- GO:0035243 ! protein-arginine omega-N symmetric methyltransferase activity
- GO:0016274 ! protein-arginine N-methyltransferase activity
- GO:0032991 ! protein-containing complex
- GO:0044877 ! protein-containing complex binding
- GO:0046982 ! protein heterodimerization activity
- GO:0006479 ! protein methylation
r