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DROME:HP1
Contents
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0000792 |
heterochromatin |
ECO:0000314 |
C |
Figure 1. Interaction of MU2 and HP1a. |
complete | |||||
GO:0005701 |
polytene chromosome chromocenter |
ECO:0000315 |
C |
Figure 3. Effects of HP1a depletion on focal movement. |
complete | |||||
GO:0010369 |
chromocenter |
ECO:0000314 |
C |
Figure 4. HP1a is not recruited to IRIF and laser induced breaks. |
complete | |||||
GO:0007067 |
mitosis |
ECO:0000314 |
P |
Fig 7. Treatment of S2 cells with HP1a dsRNA leads to a decrease in the number of cells in S phase and an apparent increase in the number of cells at both G1 and G2/M. |
complete | |||||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0044877 |
protein-containing complex binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0061408 |
positive regulation of transcription from RNA polymerase II promoter in response to heat stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:P02828) |
Seeded From UniProt |
complete | ||
enables |
GO:0070063 |
RNA polymerase binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0030674 |
protein binding, bridging |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0099122 |
RNA polymerase II C-terminal domain binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0005705 |
polytene chromosome interband |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0030544 |
Hsp70 protein binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
happens_during:(GO:0009408) |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0005703 |
polytene chromosome puff |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
exists_during:(GO:0034605) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1905634 |
regulation of protein localization to chromatin |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:1905632 |
protein localization to euchromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0000278 |
mitotic cell cycle |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1905646 |
positive regulation of FACT complex assembly |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010629 |
negative regulation of gene expression |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
FB:FBgn0086908 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010629 |
negative regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070868 |
heterochromatin organization involved in chromatin silencing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090309 |
positive regulation of methylation-dependent chromatin silencing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005721 |
pericentric heterochromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005700 |
polytene chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005704 |
polytene chromosome band |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005701 |
polytene chromosome chromocenter |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000781 |
chromosome, telomeric region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000781 |
chromosome, telomeric region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016458 |
gene silencing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0035012 |
polytene chromosome, telomeric region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016458 |
gene silencing |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005701 |
polytene chromosome chromocenter |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1900111 |
positive regulation of histone H3-K9 dimethylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033697 |
positive regulation of extent of heterochromatin assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0031507 |
heterochromatin assembly |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1900111 |
positive regulation of histone H3-K9 dimethylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0000791 |
euchromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005701 |
polytene chromosome chromocenter |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034773 |
histone H4-K20 trimethylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005700 |
polytene chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051276 |
chromosome organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000780 |
condensed nuclear chromosome, centromeric region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0000182 |
rDNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003696 |
satellite DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000792 |
heterochromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000793 |
condensed chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042981 |
regulation of apoptotic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0031060 |
regulation of histone methylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000723 |
telomere maintenance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0035012 |
polytene chromosome, telomeric region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005701 |
polytene chromosome chromocenter |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005703 |
polytene chromosome puff |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003729 |
mRNA binding |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042393 |
histone binding |
ECO:0000303 |
author statement without traceable support used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000792 |
heterochromatin |
ECO:0000303 |
author statement without traceable support used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0000775 |
chromosome, centromeric region |
ECO:0000303 |
author statement without traceable support used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0035012 |
polytene chromosome, telomeric region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005701 |
polytene chromosome chromocenter |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005703 |
polytene chromosome puff |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005720 |
nuclear heterochromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006342 |
chromatin silencing |
ECO:0007001 |
high throughput mutant phenotypic evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030702 |
chromatin silencing at centromere |
ECO:0007001 |
high throughput mutant phenotypic evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006343 |
establishment of chromatin silencing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005700 |
polytene chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0035012 |
polytene chromosome, telomeric region |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000775 |
chromosome, centromeric region |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005701 |
polytene chromosome chromocenter |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000792 |
heterochromatin |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0035064 |
methylated histone binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005703 |
polytene chromosome puff |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 Dronamraju, R & Mason, JM (2011) MU2 and HP1a regulate the recognition of double strand breaks in Drosophila melanogaster. PLoS ONE 6 e25439 PubMed GONUTS page
- ↑ Seller, CA & O'Farrell, PH (2018) Rif1 prolongs the embryonic S phase at the Drosophila mid-blastula transition. PLoS Biol. 16 e2005687 PubMed GONUTS page
- ↑ 3.00 3.01 3.02 3.03 3.04 3.05 3.06 3.07 3.08 3.09 3.10 3.11 Kwon, SH et al. (2010) Heterochromatin protein 1 (HP1) connects the FACT histone chaperone complex to the phosphorylated CTD of RNA polymerase II. Genes Dev. 24 2133-45 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 Sienski, G et al. (2015) Silencio/CG9754 connects the Piwi-piRNA complex to the cellular heterochromatin machinery. Genes Dev. 29 2258-71 PubMed GONUTS page
- ↑ Yu, Y et al. (2015) Panoramix enforces piRNA-dependent cotranscriptional silencing. Science 350 339-42 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Alekseyenko, AA et al. (2014) Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs. Genes Dev. 28 1445-60 PubMed GONUTS page
- ↑ 7.0 7.1 Seong, KH et al. (2011) Inheritance of stress-induced, ATF-2-dependent epigenetic change. Cell 145 1049-61 PubMed GONUTS page
- ↑ Dubruille, R et al. (2010) Specialization of a Drosophila capping protein essential for the protection of sperm telomeres. Curr. Biol. 20 2090-9 PubMed GONUTS page
- ↑ Gao, G et al. (2010) HipHop interacts with HOAP and HP1 to protect Drosophila telomeres in a sequence-independent manner. EMBO J. 29 819-29 PubMed GONUTS page
- ↑ Koch, CM et al. (2009) Windei, the Drosophila homolog of mAM/MCAF1, is an essential cofactor of the H3K9 methyl transferase dSETDB1/Eggless in germ line development. PLoS Genet. 5 e1000644 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 11.3 11.4 11.5 11.6 11.7 11.8 Hines, KA et al. (2009) Domains of heterochromatin protein 1 required for Drosophila melanogaster heterochromatin spreading. Genetics 182 967-77 PubMed GONUTS page
- ↑ Font-Burgada, J et al. (2008) Drosophila HP1c isoform interacts with the zinc-finger proteins WOC and Relative-of-WOC to regulate gene expression. Genes Dev. 22 3007-23 PubMed GONUTS page
- ↑ Yang, H et al. (2008) Preferential dimethylation of histone H4 lysine 20 by Suv4-20. J. Biol. Chem. 283 12085-92 PubMed GONUTS page
- ↑ Gause, M et al. (2008) Functional links between Drosophila Nipped-B and cohesin in somatic and meiotic cells. Chromosoma 117 51-66 PubMed GONUTS page
- ↑ Johansson, AM et al. (2007) POF and HP1 bind expressed exons, suggesting a balancing mechanism for gene regulation. PLoS Genet. 3 e209 PubMed GONUTS page
- ↑ Demakova, OV et al. (2007) The SU(VAR)3-9/HP1 complex differentially regulates the compaction state and degree of underreplication of X chromosome pericentric heterochromatin in Drosophila melanogaster. Genetics 175 609-20 PubMed GONUTS page
- ↑ 17.0 17.1 17.2 17.3 Blattes, R et al. (2006) Displacement of D1, HP1 and topoisomerase II from satellite heterochromatin by a specific polyamide. EMBO J. 25 2397-408 PubMed GONUTS page
- ↑ 18.0 18.1 Shaffer, CD et al. (2006) The large isoform of Drosophila melanogaster heterochromatin protein 2 plays a critical role in gene silencing and chromosome structure. Genetics 174 1189-204 PubMed GONUTS page
- ↑ 19.0 19.1 19.2 Liu, LP et al. (2005) Sex-specific role of Drosophila melanogaster HP1 in regulating chromatin structure and gene transcription. Nat. Genet. 37 1361-6 PubMed GONUTS page
- ↑ Perrini, B et al. (2004) HP1 controls telomere capping, telomere elongation, and telomere silencing by two different mechanisms in Drosophila. Mol. Cell 15 467-76 PubMed GONUTS page
- ↑ 21.0 21.1 21.2 Piacentini, L et al. (2003) Heterochromatin protein 1 (HP1) is associated with induced gene expression in Drosophila euchromatin. J. Cell Biol. 161 707-14 PubMed GONUTS page
- ↑ 22.0 22.1 22.2 22.3 22.4 22.5 22.6 Kellum, R (2003) Is HP1 an RNA detector that functions both in repression and activation? J. Cell Biol. 161 671-2 PubMed GONUTS page
- ↑ 23.0 23.1 23.2 Fanti, L et al. (2003) Chromosomal distribution of heterochromatin protein 1 (HP1) in Drosophila: a cytological map of euchromatic HP1 binding sites. Genetica 117 135-47 PubMed GONUTS page
- ↑ Shaffer, CD et al. (2002) Heterochromatin protein 2 (HP2), a partner of HP1 in Drosophila heterochromatin. Proc. Natl. Acad. Sci. U.S.A. 99 14332-7 PubMed GONUTS page
- ↑ 25.0 25.1 Donaldson, KM et al. (2002) Modifiers of terminal deficiency-associated position effect variegation in Drosophila. Genetics 160 995-1009 PubMed GONUTS page
- ↑ Seum, C et al. (2001) Ectopic HP1 promotes chromosome loops and variegated silencing in Drosophila. EMBO J. 20 812-8 PubMed GONUTS page
- ↑ Cléard, F et al. (1997) SU(VAR)3-7, a Drosophila heterochromatin-associated protein and companion of HP1 in the genomic silencing of position-effect variegation. EMBO J. 16 5280-8 PubMed GONUTS page
- ↑ 28.0 28.1 Johansson, AM et al. (2007) Painting of fourth and chromosome-wide regulation of the 4th chromosome in Drosophila melanogaster. EMBO J. 26 2307-16 PubMed GONUTS page
- ↑ 29.0 29.1 29.2 29.3 Zhimulev, IF & Belyaeva, ES (2003) Intercalary heterochromatin and genetic silencing. Bioessays 25 1040-51 PubMed GONUTS page
- ↑ Sims, RJ 3rd et al. (2003) Histone lysine methylation: a signature for chromatin function. Trends Genet. 19 629-39 PubMed GONUTS page
c
- GO:0034605 ! cellular response to heat
- GO:0003682 ! chromatin binding
- GO:0006325 ! chromatin organization
- GO:0030702 ! chromatin silencing at centromere
- GO:0006342 ! chromatin silencing
- GO:0010369 ! chromocenter
- GO:0005694 ! chromosome
- GO:0000775 ! chromosome, centromeric region
- GO:0000781 ! chromosome, telomeric region
- GO:0051276 ! chromosome organization
- GO:0000793 ! condensed chromosome
- GO:0000780 ! condensed nuclear chromosome, centromeric region
e
h
i
m
n
o
- GO:0016458 ! obsolete gene silencing
- GO:0070868 ! obsolete heterochromatin organization involved in chromatin silencing
- GO:0034773 ! obsolete histone H4-K20 trimethylation
- GO:0035012 ! obsolete polytene chromosome, telomeric region
- GO:0090309 ! obsolete positive regulation of DNA methylation-dependent heterochromatin formation
- GO:0061408 ! obsolete positive regulation of transcription from RNA polymerase II promoter in response to heat stress
- GO:1900111 ! obsolete positive regulation of histone H3-K9 dimethylation
- GO:0033697 ! obsolete positive regulation of extent of heterochromatin assembly
- GO:0031060 ! obsolete regulation of histone methylation
p
- GO:0005721 ! pericentric heterochromatin
- GO:0005703 ! polytene chromosome puff
- GO:0005705 ! polytene chromosome interband
- GO:0005701 ! polytene chromosome chromocenter
- GO:0005704 ! polytene chromosome band
- GO:0005700 ! polytene chromosome
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:1905646 ! positive regulation of FACT complex assembly
- GO:0044877 ! protein-containing complex binding
- GO:0030674 ! protein-macromolecule adaptor activity
- GO:1905632 ! protein localization to euchromatin
- Pterygota
r
- GO:0000182 ! rDNA binding
- GO:1905634 ! regulation of protein localization to chromatin
- GO:0006355 ! regulation of DNA-templated transcription
- GO:0042981 ! regulation of apoptotic process
- GO:0009408 ! response to heat
- GO:0003723 ! RNA binding
- GO:0070063 ! RNA polymerase binding
- GO:0099122 ! RNA polymerase II C-terminal domain binding