CHICK:O12939

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	SNAI1 (ECO:0000313 with Ensembl:ENSGALP00000012995)
Protein Name(s)	Snail like protein (ECO:0000313 with EMBL:CAA71033.1) Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000012995)
External Links
UniProt	O12939
EMBL	AADN03007775 Y09905
RefSeq	NP_990473.1
UniGene	Gga.3851
STRING	9031.ENSGALP00000012995
Ensembl	ENSGALT00000013010
GeneID	396047
KEGG	gga:396047
CTD	6615
eggNOG	COG5048
GeneTree	ENSGT00390000011027
HOGENOM	HOG000261665
HOVERGEN	HBG007477
KO	K05706
OMA	HCDSQAR
OrthoDB	EOG7P2XSG
PhylomeDB	O12939
TreeFam	TF315515
NextBio	20816107
Proteomes	UP000000539
GO	GO:0005737 GO:0005634 GO:0046872 GO:0001078 GO:0000977 GO:0060536 GO:0016477 GO:0001837 GO:0060972 GO:0001707 GO:0060806 GO:0043518 GO:1902230 GO:0010957 GO:0061314 GO:0001649 GO:0060021 GO:0030335 GO:0010718 GO:0045893 GO:2000810
Gene3D	3.30.160.60
InterPro	IPR029795 IPR007087 IPR015880 IPR013087
PANTHER	PTHR11389:SF430
Pfam	PF00096
SMART	SM00355
PROSITE	PS00028 PS50157

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
part_of	GO:0005623	cell	PMID:23553854^[1]	ECO:0000314	direct assay evidence used in manual assertion		C	part_of:(UBERON:0004160)\|part_of:(UBERON:0002348)	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0037618 MGI:MGI:1353563 PANTHER:PTN001227002 ZFIN:ZDB-GENE-100318-5	P		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0000286 FB:FBgn0000289 FB:FBgn0003448 MGI:MGI:1096393 MGI:MGI:1353563 MGI:MGI:2139287 MGI:MGI:2176606 MGI:MGI:98330 PANTHER:PTN001227002 RGD:1310136 SGD:S000004972 UniProtKB:O43623 UniProtKB:Q2M1K9 UniProtKB:Q4WJ81 UniProtKB:Q8NAP3 UniProtKB:Q9P1Z0 UniProtKB:Q9Y2X9 WB:WBGene00001324	C		Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0037618 MGI:MGI:1353563 PANTHER:PTN001227002 RGD:1310136 UniProtKB:Q9Y2X9	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	PMID:21873635^[2]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0003448 FB:FBgn0037617 FB:FBgn0039860 PANTHER:PTN001227002	F		Seeded From UniProt	complete
involved_in	GO:2000810	regulation of bicellular tight junction assembly	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
involved_in	GO:1902230	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
enables	GO:0070888	E-box binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	F		Seeded From UniProt	complete
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
involved_in	GO:0043518	negative regulation of DNA damage response, signal transduction by p53 class mediator	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
involved_in	GO:0030335	positive regulation of cell migration	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
enables	GO:0019900	kinase binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	F		Seeded From UniProt	complete
involved_in	GO:0010957	negative regulation of vitamin D biosynthetic process	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
involved_in	GO:0010718	positive regulation of epithelial to mesenchymal transition	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
part_of	GO:0005829	cytosol	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	C		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	C		Seeded From UniProt	complete
part_of	GO:0005721	pericentric heterochromatin	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	C		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	C		Seeded From UniProt	complete
involved_in	GO:0001837	epithelial to mesenchymal transition	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
involved_in	GO:0001649	osteoblast differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
enables	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	F		Seeded From UniProt	complete
enables	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	F		Seeded From UniProt	complete
involved_in	GO:0000122	negative regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:O95863 ensembl:ENSP00000244050	P		Seeded From UniProt	complete
involved_in	GO:0070828	heterochromatin organization	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0061314	Notch signaling involved in heart development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0060972	left/right pattern formation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0060806	negative regulation of cell differentiation involved in embryonic placenta development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0060536	cartilage morphogenesis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0060021	roof of mouth development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0045892	negative regulation of transcription, DNA-templated	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
enables	GO:0043565	sequence-specific DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	F		Seeded From UniProt	complete
involved_in	GO:0030335	positive regulation of cell migration	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0016477	cell migration	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0010718	positive regulation of epithelial to mesenchymal transition	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0007498	mesoderm development	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0006357	regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	C		Seeded From UniProt	complete
part_of	GO:0005721	pericentric heterochromatin	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	C		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	C		Seeded From UniProt	complete
involved_in	GO:0003198	epithelial to mesenchymal transition involved in endocardial cushion formation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0001837	epithelial to mesenchymal transition	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
involved_in	GO:0001707	mesoderm formation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
enables	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	F		Seeded From UniProt	complete
enables	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	F		Seeded From UniProt	complete
involved_in	GO:0000122	negative regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q02085 ensembl:ENSMUSP00000050581	P		Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR013087	F		Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ Tao, G et al. (2013) Snai1 is important for avian epicardial cell transformation and motility. Dev. Dyn. 242 699-708 PubMed GONUTS page
↑ ^2.0 ^2.1 ^2.2 ^2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:23553854-1] Tao, G et al. (2013) Snai1 is important for avian epicardial cell transformation and motility. Dev. Dyn. 242 699-708 PubMed GONUTS page

[PMID:21873635-2] 2.0 ^2.1 ^2.2 ^2.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:O12939

Contents

Annotations

Notes

References

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