GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:MED20

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) MED20 (synonyms: TRFP)
Protein Name(s) Mediator of RNA polymerase II transcription subunit 20

Mediator complex subunit 20 TRF-proximal protein homolog

External Links
UniProt Q5ZKY9
EMBL AJ719945
RefSeq NP_001006327.1
UniGene Gga.7432
STRING 9031.ENSGALP00000005490
PaxDb Q5ZKY9
Ensembl ENSGALT00000005500
GeneID 419926
KEGG gga:419926
CTD 9477
eggNOG NOG268717
GeneTree ENSGT00390000002060
HOGENOM HOG000290707
HOVERGEN HBG106543
InParanoid Q5ZKY9
KO K13528
OMA GVTCVCQ
OrthoDB EOG7XSTFN
PhylomeDB Q5ZKY9
TreeFam TF315156
Reactome REACT_197588
REACT_253047
REACT_256708
NextBio 20822913
PRO PR:Q5ZKY9
Proteomes UP000000539
GO GO:0016592
GO:0001104
InterPro IPR013921
Pfam PF08612

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0016592

mediator complex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013531
MGI:MGI:1929648
PANTHER:PTN000279568
PomBase:SPAC17G8.05
TAIR:locus:2062799

C

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013531
PANTHER:PTN000279568

P

Seeded From UniProt

complete

enables

GO:0003713

transcription coactivator activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0013531
PANTHER:PTN000279568

F

Seeded From UniProt

complete

involved_in

GO:1903508

positive regulation of nucleic acid-templated transcription

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0003713

P

Seeded From UniProt

complete

enables

GO:0003712

transcription coregulator activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013921

F

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013921

P

Seeded From UniProt

complete

part_of

GO:0016592

mediator complex

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013921

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page