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CHICK:IRF3
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | IRF3 | |
Protein Name(s) | Interferon regulatory factor 3
IRF-3 | |
External Links | ||
UniProt | Q90643 | |
EMBL | U20338 | |
PIR | S56753 | |
RefSeq | NP_990703.1 | |
UniGene | Gga.1087 | |
ProteinModelPortal | Q90643 | |
STRING | 9031.ENSGALP00000023072 | |
PaxDb | Q90643 | |
PRIDE | Q90643 | |
GeneID | 396330 | |
KEGG | gga:396330 | |
CTD | 3665 | |
eggNOG | NOG39245 | |
HOGENOM | HOG000111812 | |
HOVERGEN | HBG105600 | |
InParanoid | Q90643 | |
KO | K09447 | |
PhylomeDB | Q90643 | |
Reactome | REACT_24971 REACT_25095 REACT_75832 | |
NextBio | 20816378 | |
PRO | PR:Q90643 | |
Proteomes | UP000000539 | |
GO | GO:0005634 GO:0000975 GO:0003700 GO:0002218 GO:0045087 GO:0034138 GO:0002224 GO:0006351 | |
Gene3D | 1.10.10.10 2.60.200.10 | |
InterPro | IPR019817 IPR001346 IPR019471 IPR017855 IPR008984 IPR011991 | |
Pfam | PF00605 PF10401 | |
PRINTS | PR00267 | |
SMART | SM00348 | |
SUPFAM | SSF49879 | |
PROSITE | PS00601 PS51507 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0002224 |
toll-like receptor signaling pathway |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1096873 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002376 |
immune system process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1096873 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1859212 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0000981 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Lu, Y et al. (2009) Expression profiles of genes in Toll-like receptor-mediated signaling of broilers infected with Clostridium perfringens. Clin. Vaccine Immunol. 16 1639-47 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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