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CAEEL:H2KZD5

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Species (Taxon ID) Caenorhabditis elegans. (6239)
Gene Name(s) No Information Provided.
Protein Name(s) Chromosome-Segregation and RNAi deficient (ECO:0000313 with EMBL:CCD67715.1)
External Links
UniProt H2KZD5
EMBL BX284604
RefSeq NP_001040938.1
UniGene Cel.6224
ProteinModelPortal H2KZD5
IntAct H2KZD5
STRING 6239.F20D12.1a
EPD H2KZD5
PaxDb H2KZD5
PRIDE H2KZD5
EnsemblMetazoa [example_ID F20D12.1a]
GeneID 177591
KEGG cel:CELE_F20D12.1
CTD 177591
WormBase F20D12.1a
eggNOG KOG1041
ENOG410XP07
GeneTree ENSGT00760000119148
InParanoid H2KZD5
OMA NIHECLK
PhylomeDB H2KZD5
Proteomes UP000001940
ExpressionAtlas H2KZD5
GO GO:0000794
GO:0070090
GO:0005634
GO:0043186
GO:0070551
GO:0003676
GO:0000070
GO:0006379
GO:0016246
Gene3D 3.30.420.10
InterPro IPR003100
IPR003165
IPR012337
Pfam PF02171
SMART SM00949
SM00950
SUPFAM SSF101690
SSF53098
PROSITE PS50822

Annotations

Qualifier GO ID GO term name Reference Evidence Code with/from Aspect Notes Status
GO:0000070

mitotic sister chromatid segregation

PMID:17110334[1]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:0000794

condensed nuclear chromosome

PMID:19804758[2]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0003676

nucleic acid binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR003165
InterPro:IPR012337

F

Seeded From UniProt

GO:0005634

nucleus

PMID:19804758[2]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0005634

nucleus

PMID:22231398[3]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0006379

mRNA cleavage

PMID:18007599[4]

IDA: Inferred from Direct Assay

-

P

Seeded From UniProt

GO:0016246

RNA interference

PMID:17110334[1]

IMP: Inferred from Mutant Phenotype

-

P

Seeded From UniProt

GO:0043186

P granule

PMID:19804758[2]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0070090

metaphase plate

PMID:19804758[2]

IDA: Inferred from Direct Assay

-

C

Seeded From UniProt

GO:0070551

endoribonuclease activity, cleaving siRNA-paired mRNA

PMID:18007599[4]

IDA: Inferred from Direct Assay

-

F

Seeded From UniProt

GO:0090502

RNA phosphodiester bond hydrolysis, endonucleolytic

GO_REF:0000108

IEA: Inferred from Electronic Annotation

GO:0070551

P

Seeded From UniProt

GO:0005634

nucleus

PMID:22863779[5]

IDA: Inferred from Direct Assay

C

Figure 2

complete
CACAO 7442

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Yigit, E et al. (2006) Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi. Cell 127 747-57 PubMed GONUTS page
  2. 2.0 2.1 2.2 2.3 Claycomb, JM et al. (2009) The Argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation. Cell 139 123-34 PubMed GONUTS page
  3. Friend, K et al. (2012) A conserved PUF-Ago-eEF1A complex attenuates translation elongation. Nat. Struct. Mol. Biol. 19 176-83 PubMed GONUTS page
  4. 4.0 4.1 Aoki, K et al. (2007) In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans. EMBO J. 26 5007-19 PubMed GONUTS page
  5. Avgousti, DC et al. (2012) CSR-1 RNAi pathway positively regulates histone expression in C. elegans. EMBO J. 31 3821-32 PubMed GONUTS page