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CAEEL:H2KZD5
Contents
| Species (Taxon ID) | Caenorhabditis elegans. (6239) | |
| Gene Name(s) | No Information Provided. | |
| Protein Name(s) | Chromosome-Segregation and RNAi deficient (ECO:0000313 with EMBL:CCD67715.1) | |
| External Links | ||
| UniProt | H2KZD5 | |
| EMBL | BX284604 | |
| RefSeq | NP_001040938.1 | |
| UniGene | Cel.6224 | |
| ProteinModelPortal | H2KZD5 | |
| IntAct | H2KZD5 | |
| STRING | 6239.F20D12.1a | |
| EPD | H2KZD5 | |
| PaxDb | H2KZD5 | |
| PRIDE | H2KZD5 | |
| EnsemblMetazoa | [example_ID F20D12.1a] | |
| GeneID | 177591 | |
| KEGG | cel:CELE_F20D12.1 | |
| CTD | 177591 | |
| WormBase | F20D12.1a | |
| eggNOG | KOG1041 ENOG410XP07 | |
| GeneTree | ENSGT00760000119148 | |
| InParanoid | H2KZD5 | |
| OMA | NIHECLK | |
| PhylomeDB | H2KZD5 | |
| Proteomes | UP000001940 | |
| ExpressionAtlas | H2KZD5 | |
| GO | GO:0000794 GO:0070090 GO:0005634 GO:0043186 GO:0070551 GO:0003676 GO:0000070 GO:0006379 GO:0016246 | |
| Gene3D | 3.30.420.10 | |
| InterPro | IPR003100 IPR003165 IPR012337 | |
| Pfam | PF02171 | |
| SMART | SM00949 SM00950 | |
| SUPFAM | SSF101690 SSF53098 | |
| PROSITE | PS50822 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0005634 |
nucleus |
ECO:0000314 |
C |
Figure 2 |
complete | |||||
|
involved_in |
GO:1903863 |
P granule assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0000070 |
mitotic sister chromatid segregation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016246 |
RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0070551 |
endoribonuclease activity, cleaving siRNA-paired mRNA |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0070090 |
metaphase plate |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0043186 |
P granule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0090625 |
mRNA cleavage involved in gene silencing by siRNA |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0000794 |
condensed nuclear chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0090502 |
RNA phosphodiester bond hydrolysis, endonucleolytic |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0070551 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031047 |
gene silencing by RNA |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Avgousti, DC et al. (2012) CSR-1 RNAi pathway positively regulates histone expression in C. elegans. EMBO J. 31 3821-32 PubMed GONUTS page
- ↑ Andralojc, KM et al. (2017) ELLI-1, a novel germline protein, modulates RNAi activity and P-granule accumulation in Caenorhabditis elegans. PLoS Genet. 13 e1006611 PubMed GONUTS page
- ↑ 3.0 3.1 Yigit, E et al. (2006) Analysis of the C. elegans Argonaute family reveals that distinct Argonautes act sequentially during RNAi. Cell 127 747-57 PubMed GONUTS page
- ↑ 4.0 4.1 Aoki, K et al. (2007) In vitro analyses of the production and activity of secondary small interfering RNAs in C. elegans. EMBO J. 26 5007-19 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 Claycomb, JM et al. (2009) The Argonaute CSR-1 and its 22G-RNA cofactors are required for holocentric chromosome segregation. Cell 139 123-34 PubMed GONUTS page
- ↑ Friend, K et al. (2012) A conserved PUF-Ago-eEF1A complex attenuates translation elongation. Nat. Struct. Mol. Biol. 19 176-83 PubMed GONUTS page
