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ARATH:AGO7
Contents
| Species (Taxon ID) | Arabidopsis thaliana (Mouse-ear cress). (3702) | |
| Gene Name(s) | AGO7 (synonyms: ZIP) | |
| Protein Name(s) | Protein argonaute 7
Protein ZIPPY | |
| External Links | ||
| UniProt | Q9C793 | |
| EMBL | AC073178 CP002684 AY394564 | |
| RefSeq | NP_177103.1 | |
| UniGene | At.35421 | |
| ProteinModelPortal | Q9C793 | |
| SMR | Q9C793 | |
| STRING | 3702.AT1G69440.1-P | |
| PRIDE | Q9C793 | |
| EnsemblPlants | AT1G69440.1 | |
| GeneID | 843276 | |
| KEGG | ath:AT1G69440 | |
| TAIR | AT1G69440 | |
| eggNOG | NOG279895 | |
| HOGENOM | HOG000116043 | |
| InParanoid | Q9C793 | |
| KO | K11593 | |
| OMA | SRIIFFR | |
| PhylomeDB | Q9C793 | |
| Proteomes | UP000006548 | |
| Genevestigator | Q9C793 | |
| GO | GO:0005737 GO:0030529 GO:0003723 GO:0006952 GO:0035195 GO:0010599 GO:0010267 GO:0040034 GO:0006355 GO:0006417 GO:0006351 GO:0010050 | |
| Gene3D | 3.30.420.10 | |
| InterPro | IPR014811 IPR003100 IPR003165 IPR012337 | |
| Pfam | PF08699 PF02170 PF02171 | |
| SMART | SM00949 SM00950 | |
| SUPFAM | SSF101690 SSF53098 | |
| PROSITE | PS50821 PS50822 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0060145 |
viral gene silencing in virus induced gene silencing |
ECO:0000315 |
P |
Supplemental Fig. 5.B. shows that ago7 mutants lacking AGO7 have a modest increase in ΔCP and TCV-GFP RNA accumulation. This suggests that AGO7 may not be the most efficient slicer of RNA, but serves as a surrogate slicer in the absence of AGO1. |
complete | |||||
|
involved_in |
GO:0060145 |
viral gene silencing in virus induced gene silencing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0040034 |
regulation of development, heterochronic |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
NOT|involved_in |
GO:0035196 |
production of miRNAs involved in gene silencing by miRNA |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
NOT|involved_in |
GO:0016246 |
RNA interference |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010599 |
production of lsiRNA involved in RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010267 |
production of ta-siRNAs involved in RNA interference |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010050 |
vegetative phase change |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0010492 |
maintenance of shoot apical meristem identity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q75HC2 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0035195 |
gene silencing by miRNA |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0031047 |
gene silencing by RNA |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006952 |
defense response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006417 |
regulation of translation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Qu, F et al. (2008) Arabidopsis DRB4, AGO1, AGO7, and RDR6 participate in a DCL4-initiated antiviral RNA silencing pathway negatively regulated by DCL1. Proc. Natl. Acad. Sci. U.S.A. 105 14732-7 PubMed GONUTS page
- ↑ Brosseau, C & Moffett, P (2015) Functional and Genetic Analysis Identify a Role for Arabidopsis ARGONAUTE5 in Antiviral RNA Silencing. Plant Cell 27 1742-54 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 Hunter, C et al. (2003) The Arabidopsis heterochronic gene ZIPPY is an ARGONAUTE family member. Curr. Biol. 13 1734-9 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 Fahlgren, N et al. (2006) Regulation of AUXIN RESPONSE FACTOR3 by TAS3 ta-siRNA affects developmental timing and patterning in Arabidopsis. Curr. Biol. 16 939-44 PubMed GONUTS page
- ↑ Katiyar-Agarwal, S et al. (2007) A novel class of bacteria-induced small RNAs in Arabidopsis. Genes Dev. 21 3123-34 PubMed GONUTS page
- ↑ Jouannet, V et al. (2012) Cytoplasmic Arabidopsis AGO7 accumulates in membrane-associated siRNA bodies and is required for ta-siRNA biogenesis. EMBO J. 31 1704-13 PubMed GONUTS page
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