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YEAST:SYDC
Contents
| Species (Taxon ID) | Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292) | |
| Gene Name(s) | DPS1 (synonyms: APS, APS1) | |
| Protein Name(s) | Aspartate--tRNA ligase, cytoplasmic
Aspartyl-tRNA synthetase AspRS | |
| External Links | ||
| UniProt | P04802 | |
| EMBL | X03606 X06665 X97560 Z73123 Z73122 X91488 BK006945 | |
| PIR | A23508 | |
| RefSeq | NP_013083.1 | |
| PDB | 1ASY 1ASZ 1EOV | |
| PDBsum | 1ASY 1ASZ 1EOV | |
| ProteinModelPortal | P04802 | |
| SMR | P04802 | |
| BioGrid | 31235 | |
| DIP | DIP-4093N | |
| IntAct | P04802 | |
| MINT | MINT-510718 | |
| STRING | 4932.YLL018C | |
| MaxQB | P04802 | |
| PaxDb | P04802 | |
| PRIDE | P04802 | |
| EnsemblFungi | [example_ID YLL018C] | |
| GeneID | 850643 | |
| KEGG | sce:YLL018C | |
| SGD | S000003941 | |
| eggNOG | COG0017 | |
| GeneTree | ENSGT00550000074880 | |
| HOGENOM | HOG000226032 | |
| InParanoid | P04802 | |
| KO | K01876 | |
| OMA | IWLRARV | |
| OrthoDB | EOG7PK972 | |
| BioCyc | YEAST:G3O-32123-MONOMER | |
| SABIO-RK | P04802 | |
| EvolutionaryTrace | P04802 | |
| NextBio | 966579 | |
| PRO | PR:P04802 | |
| Proteomes | UP000002311 | |
| Genevestigator | P04802 | |
| GO | GO:0005737 GO:0005634 GO:0004815 GO:0005524 GO:0003723 GO:0006422 | |
| Gene3D | 2.40.50.140 | |
| InterPro | IPR004364 IPR018150 IPR006195 IPR004523 IPR002312 IPR012340 IPR004365 | |
| PANTHER | PTHR22594 PTHR22594:SF10 | |
| Pfam | PF00152 PF01336 | |
| PRINTS | PR01042 | |
| SUPFAM | SSF50249 | |
| TIGRFAMs | TIGR00458 | |
| PROSITE | PS50862 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0006422 |
aspartyl-tRNA aminoacylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004815 |
aspartate-tRNA ligase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0017101 |
aminoacyl-tRNA synthetase multienzyme complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0002069 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0006422 |
aspartyl-tRNA aminoacylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000502509 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000502509 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0004815 |
aspartate-tRNA ligase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000502509 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003723 |
RNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000502509 |
F |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004812 |
aminoacyl-tRNA ligase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004815 |
aspartate-tRNA ligase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006418 |
tRNA aminoacylation for protein translation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006422 |
aspartyl-tRNA aminoacylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004815 |
aspartate-tRNA ligase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0016874 |
ligase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006412 |
translation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0004812 |
aminoacyl-tRNA ligase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Martin, F et al. (1993) Overproduction and purification of native and queuine-lacking Escherichia coli tRNA(Asp). Role of the wobble base in tRNA(Asp) acylation. J. Mol. Biol. 234 965-74 PubMed GONUTS page
- ↑ 2.0 2.1 Frugier, M et al. (2005) tRNA-balanced expression of a eukaryal aminoacyl-tRNA synthetase by an mRNA-mediated pathway. EMBO Rep. 6 860-5 PubMed GONUTS page
- ↑ Frugier, M & Giegé, R (2003) Yeast aspartyl-tRNA synthetase binds specifically its own mRNA. J. Mol. Biol. 331 375-83 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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