YEAST:RIM4

Species (Taxon ID)	Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292)
Gene Name(s)	RIM4
Protein Name(s)	Meiotic activator RIM4 Regulator of IME2 protein 4
External Links
UniProt	P38741
EMBL	U11582 AY558114 BK006934
PIR	S46838
RefSeq	NP_011839.1
ProteinModelPortal	P38741
SMR	P38741
BioGrid	36398
DIP	DIP-5673N
IntAct	P38741
MINT	MINT-497617
STRING	4932.YHL024W
PaxDb	P38741
EnsemblFungi	[example_ID YHL024W]
GeneID	856361
KEGG	sce:YHL024W
CYGD	YHL024w
SGD	S000001016
eggNOG	NOG322326
HOGENOM	HOG000142374
InParanoid	P38741
OMA	FIKYETE
OrthoDB	EOG779P75
BioCyc	YEAST:G3O-31044-MONOMER
NextBio	981820
Proteomes	UP000002311
Genevestigator	P38741
GO	GO:0000166 GO:0003723 GO:0007126 GO:0006279 GO:0007131 GO:0030435
Gene3D	3.30.70.330
InterPro	IPR012677 IPR000504
Pfam	PF00076
SMART	SM00360
PROSITE	PS50102

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
part_of	GO:0005737	cytoplasm	PMID:11914276^[1]	ECO:0007005	high throughput direct assay evidence used in manual assertion		C	Seeded From UniProt	complete
involved_in	GO:0030435	sporulation resulting in formation of a cellular spore	PMID:10806425^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0007131	reciprocal meiotic recombination	PMID:11713679^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0051321	meiotic cell cycle	PMID:11713679^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0006279	premeiotic DNA replication	PMID:11713679^[3]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
enables	GO:0003723	RNA binding	PMID:10806425^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		F	Seeded From UniProt	complete
involved_in	GO:0045292	mRNA cis splicing, via spliceosome	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0260944 PANTHER:PTN000567445	P	Seeded From UniProt	complete
part_of	GO:0016607	nuclear speck	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0004587 FB:FBgn0265298 MGI:MGI:98283 MGI:MGI:98284 MGI:MGI:98285 MGI:MGI:98287 PANTHER:PTN000567445 RGD:1359422 TAIR:locus:2024770 TAIR:locus:2035651 TAIR:locus:2049766 TAIR:locus:2079502 TAIR:locus:2086804 TAIR:locus:2099931 TAIR:locus:2124799 TAIR:locus:2131864 TAIR:locus:2144945 TAIR:locus:2173338 TAIR:locus:2199837 UniProtKB:O75494 UniProtKB:P84103 UniProtKB:Q01130 UniProtKB:Q07955 UniProtKB:Q08170 UniProtKB:Q13247 UniProtKB:Q96PK6 UniProtKB:Q9BRL6 UniProtKB:Q9BWF3	C	Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000567446 PomBase:SPBC11C11.08	C	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0004587 FB:FBgn0011305 FB:FBgn0011640 FB:FBgn0028554 FB:FBgn0260944 FB:FBgn0265298 FB:FBgn0283477 MGI:MGI:1100865 MGI:MGI:1333805 MGI:MGI:1921361 MGI:MGI:98283 MGI:MGI:98284 MGI:MGI:98285 MGI:MGI:98287 PANTHER:PTN000567445 PomBase:SPBC11C11.08 RGD:1309233 RGD:1359241 RGD:1359422 RGD:1561347 RGD:1587490 RGD:3664 TAIR:locus:2024770 TAIR:locus:2035651 TAIR:locus:2046638 TAIR:locus:2049766 TAIR:locus:2079502 TAIR:locus:2086804 TAIR:locus:2099931 TAIR:locus:2114643 TAIR:locus:2117706 TAIR:locus:2119797 TAIR:locus:2122990 TAIR:locus:2124799 TAIR:locus:2131864 TAIR:locus:2144945 TAIR:locus:2173088 TAIR:locus:2173338 TAIR:locus:2199837 UniProtKB:O75494 UniProtKB:P84103 UniProtKB:Q01130 UniProtKB:Q07955 UniProtKB:Q08170 UniProtKB:Q13242 UniProtKB:Q13243 UniProtKB:Q13247 UniProtKB:Q16629 UniProtKB:Q8I3T5 UniProtKB:Q8I468 UniProtKB:Q96PK6 UniProtKB:Q9BQ04 UniProtKB:Q9BRL6 UniProtKB:Q9BWF3 UniProtKB:Q9Y4C8 WB:WBGene00004315 WB:WBGene00004699 WB:WBGene00004701 WB:WBGene00004703	C	Seeded From UniProt	complete
enables	GO:0003723	RNA binding	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0011640 PANTHER:PTN000567445 RGD:3664 SGD:S000001016 UniProtKB:O75494 UniProtKB:P84103 UniProtKB:Q07955 UniProtKB:Q13247 UniProtKB:Q9BWF3	F	Seeded From UniProt	complete
involved_in	GO:0000381	regulation of alternative mRNA splicing, via spliceosome	PMID:21873635^[4]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0004587 FB:FBgn0011305 FB:FBgn0028554 FB:FBgn0030479 FB:FBgn0260944 FB:FBgn0265298 FB:FBgn0283477 MGI:MGI:1100865 MGI:MGI:98284 PANTHER:PTN000567445 UniProtKB:P0DJD3 UniProtKB:Q13247 UniProtKB:Q8WXF0 UniProtKB:Q9BWF3	P	Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR000504 InterPro:IPR003954 InterPro:IPR035979	F	Seeded From UniProt	complete
involved_in	GO:0051321	meiotic cell cycle	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0469	P	Seeded From UniProt	complete
involved_in	GO:0030435	sporulation resulting in formation of a cellular spore	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0749	P	Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0694	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ Kumar, A et al. (2002) Subcellular localization of the yeast proteome. Genes Dev. 16 707-19 PubMed GONUTS page
↑ ^2.0 ^2.1 Soushko, M & Mitchell, AP (2000) An RNA-binding protein homologue that promotes sporulation-specific gene expression in Saccharomyces cerevisiae. Yeast 16 631-9 PubMed GONUTS page
↑ ^3.0 ^3.1 ^3.2 Deng, C & Saunders, WS (2001) RIM4 encodes a meiotic activator required for early events of meiosis in Saccharomyces cerevisiae. Mol. Genet. Genomics 266 497-504 PubMed GONUTS page
↑ ^4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:11914276-1] Kumar, A et al. (2002) Subcellular localization of the yeast proteome. Genes Dev. 16 707-19 PubMed GONUTS page

[PMID:10806425-2] 2.0 ^2.1 Soushko, M & Mitchell, AP (2000) An RNA-binding protein homologue that promotes sporulation-specific gene expression in Saccharomyces cerevisiae. Yeast 16 631-9 PubMed GONUTS page

[PMID:11713679-3] 3.0 ^3.1 ^3.2 Deng, C & Saunders, WS (2001) RIM4 encodes a meiotic activator required for early events of meiosis in Saccharomyces cerevisiae. Mol. Genet. Genomics 266 497-504 PubMed GONUTS page

[PMID:21873635-4] 4.0 ^4.1 ^4.2 ^4.3 ^4.4 ^4.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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YEAST:RIM4

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