GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

YEAST:HOS2

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast). (559292)
Gene Name(s) HOS2
Protein Name(s) Probable histone deacetylase HOS2
External Links
UniProt P53096
EMBL X91837
Z72716
BK006941
PIR S64211
RefSeq NP_011321.1
ProteinModelPortal P53096
SMR P53096
BioGrid 33063
DIP DIP-6828N
IntAct P53096
MINT MINT-629670
STRING 4932.YGL194C
MaxQB P53096
PaxDb P53096
EnsemblFungi [example_ID YGL194C]
GeneID 852681
KEGG sce:YGL194C
CYGD YGL194c
SGD S000003162
eggNOG COG0123
GeneTree ENSGT00390000003411
HOGENOM HOG000225180
InParanoid P53096
KO K11483
OMA DFGPTHP
OrthoDB EOG78M0B2
BioCyc YEAST:G3O-30675-MONOMER
NextBio 971996
Proteomes UP000002311
Genevestigator P53096
GO GO:0034967
GO:0017136
GO:0032041
GO:0097372
GO:0046969
GO:0046970
GO:0045129
GO:0006325
GO:0016575
GO:0045835
GO:0032874
GO:0006355
GO:0006351
Gene3D 3.40.800.20
InterPro IPR000286
IPR003084
IPR023801
PANTHER PTHR10625
Pfam PF00850
PIRSF PIRSF037913
PRINTS PR01270
PR01271

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0005737

cytoplasm

PMID:22842922[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:22842922[1]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0070210

Rpd3L-Expanded complex

PMID:19040720[2]

ECO:0007005

high throughput direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0034399

nuclear periphery

PMID:25817432[3]

ECO:0000314

direct assay evidence used in manual assertion

C

exists_during:(GO:0006974)

Seeded From UniProt

complete

involved_in

GO:0045835

negative regulation of meiotic nuclear division

PMID:11711434[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0045129

NAD-independent histone deacetylase activity

PMID:11711434[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0034967

Set3 complex

PMID:11711434[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0032874

positive regulation of stress-activated MAPK cascade

PMID:18487345[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0017136

NAD-dependent histone deacetylase activity

PMID:11711434[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0016575

histone deacetylation

PMID:11711434[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:19379692[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:8962081[7]

ECO:0000250

sequence similarity evidence used in manual assertion

P

Seeded From UniProt

Missing: with/from

involved_in

GO:0006325

chromatin organization

PMID:8962081[7]

ECO:0000250

sequence similarity evidence used in manual assertion

P

Seeded From UniProt

Missing: with/from

involved_in

GO:0070933

histone H4 deacetylation

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:108086
MGI:MGI:1097691
MGI:MGI:1343091
PANTHER:PTN002578320
PomBase:SPAC3G9.07c
SGD:S000005274
SGD:S000006272
UniProtKB:G5EB64
UniProtKB:Q13547

P

Seeded From UniProt

complete

involved_in

GO:0070932

histone H3 deacetylation

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:108086
MGI:MGI:1097691
PANTHER:PTN002578320
RGD:1309799
RGD:619976
RGD:619977
SGD:S000005274
TAIR:locus:2098115
UniProtKB:G5EB64
UniProtKB:Q13547

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002578320
PomBase:SPBC36.05c
SGD:S000005274
SGD:S000006272
UniProtKB:O15379
UniProtKB:Q13547
UniProtKB:Q92769
WB:WBGene00001834

P

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015805
FB:FBgn0025825
MGI:MGI:108086
MGI:MGI:1097691
PANTHER:PTN002578320
PomBase:SPAC3G9.07c
PomBase:SPBC36.05c
RGD:1309799
RGD:619976
SGD:S000003162
SGD:S000005274
TAIR:locus:2162017
UniProtKB:G5EB64
UniProtKB:O15379
UniProtKB:Q13547
UniProtKB:Q7K6A1
UniProtKB:Q92769
WB:WBGene00001834
dictyBase:DDB_G0270338

F

Seeded From UniProt

complete

part_of

GO:0000118

histone deacetylase complex

PMID:21873635[8]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015805
MGI:MGI:108086
PANTHER:PTN002578320
PomBase:SPAC3G9.07c
PomBase:SPBC36.05c
SGD:S000003162
SGD:S000005274
SGD:S000006272
UniProtKB:Q13547
UniProtKB:Q92769
WB:WBGene00001834

C

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003084

F

Seeded From UniProt

complete

involved_in

GO:0016575

histone deacetylation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003084

P

Seeded From UniProt

complete

enables

GO:0032041

NAD-dependent histone deacetylase activity (H3-K14 specific)

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.1.98

F

Seeded From UniProt

complete

enables

GO:0004407

histone deacetylase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:3.5.1.98

F

Seeded From UniProt

complete

involved_in

GO:0006325

chromatin organization

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0156

P

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0378

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

edit table

Notes

References

See Help:References for how to manage references in GONUTS.

  1. ↑ 1.0 1.1 Tkach, JM et al. (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat. Cell Biol. 14 966-76 PubMed GONUTS page
  2. ↑ Shevchenko, A et al. (2008) Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment. Genome Biol. 9 R167 PubMed GONUTS page
  3. ↑ Gallina, I et al. (2015) Cmr1/WDR76 defines a nuclear genotoxic stress body linking genome integrity and protein quality control. Nat Commun 6 6533 PubMed GONUTS page
  4. ↑ 4.0 4.1 4.2 4.3 4.4 Pijnappel, WW et al. (2001) The S. cerevisiae SET3 complex includes two histone deacetylases, Hos2 and Hst1, and is a meiotic-specific repressor of the sporulation gene program. Genes Dev. 15 2991-3004 PubMed GONUTS page
  5. ↑ Cohen, TJ et al. (2008) Hos2p/Set3p deacetylase complex signals secretory stress through the Mpk1p cell integrity pathway. Eukaryotic Cell 7 1191-9 PubMed GONUTS page
  6. ↑ Kim, T & Buratowski, S (2009) Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 5' transcribed regions. Cell 137 259-72 PubMed GONUTS page
  7. ↑ 7.0 7.1 Rundlett, SE et al. (1996) HDA1 and RPD3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription. Proc. Natl. Acad. Sci. U.S.A. 93 14503-8 PubMed GONUTS page
  8. ↑ 8.0 8.1 8.2 8.3 8.4 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
Retrieved from "https://gowiki.tamu.edu/wiki/index.php?title=YEAST:HOS2&oldid=5934785"