GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
XENTR:A9JSE6
Contents
Species (Taxon ID) | Xenopus tropicalis (Western clawed frog) (Silurana tropicalis). (8364) | |
Gene Name(s) | LOC100135148 (ECO:0000313 with EMBL:AAI56031.1) (synonyms: fbxl12 (ECO:0000313 with Ensembl:ENSXETP00000001424)) | |
Protein Name(s) | LOC100135148 protein (ECO:0000313 with EMBL:AAI56031.1)
Uncharacterized protein (ECO:0000313 with Ensembl:ENSXETP00000001424) | |
External Links | ||
UniProt | A9JSE6 | |
EMBL | AAMC01027655 BC156030 | |
UniGene | Str.67989 | |
STRING | 8364.ENSXETP00000001424 | |
Ensembl | ENSXETT00000001424 | |
Xenbase | XB-GENE-942694 | |
eggNOG | NOG113187 | |
GeneTree | ENSGT00390000003354 | |
HOGENOM | HOG000112675 | |
HOVERGEN | HBG051672 | |
InParanoid | A9JSE6 | |
OMA | ISMAWLL | |
OrthoDB | EOG7HQN93 | |
TreeFam | TF313434 | |
Proteomes | UP000008143 | |
InterPro | IPR001810 | |
Pfam | PF12937 | |
SMART | SM00256 | |
PROSITE | PS50181 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0003677 |
DNA binding |
ECO:0000314 |
F |
See Table 1 and Figure 2. |
complete | |||||
contributes_to |
GO:0061630 |
ubiquitin protein ligase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1351663 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051726 |
regulation of cell cycle |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1351663 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0031146 |
SCF-dependent proteasomal ubiquitin-dependent protein catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1354702 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0019005 |
SCF ubiquitin ligase complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0037236 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002364414 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002364414 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000086 |
G2/M transition of mitotic cell cycle |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1351663 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016567 |
protein ubiquitination |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0061630 |
P |
Seeded From UniProt |
complete | ||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Postow, L & Funabiki, H (2013) An SCF complex containing Fbxl12 mediates DNA damage-induced Ku80 ubiquitylation. Cell Cycle 12 587-95 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page