User:Smahoney2

My Annotations

Status	Page	Date/Time	GO Term (Aspect)	Reference	Evidence	Notes	Links
acceptable	VIBF1:Q5E614	2013-09-15 11:14:10 CDT	GO:0008218 bioluminescence (P)	PMID:14507383	ECO:0000315 mutant phenotype evidence used in manual assertion	In Figure 3, ainS mutant failed to persist in the squid light organ.	challenge
acceptable	VIBF1:Q5E6B4	2013-09-29 16:07:35 CDT	GO:0008218 bioluminescence (P)	PMID:14507383	ECO:0000315 mutant phenotype evidence used in manual assertion	In Figure 3, the luxO mutant resulted in an acceleration of the onset of luminescence in culture	challenge
updatedbyinstructor	ECOLI:NUSA	2013-10-08 22:36:32 CDT	GO:0051259 protein complex oligomerization (P)	PMID:23907089	ECO:0000314 direct assay evidence used in manual assertion	In Figure 1, it is shown that under heat shock conditions NusA can form stable high molecular weight(HMW)oligomers.	challenge
unacceptable	SALT1:D0ZSD6	2013-11-04 11:28:04 CST	GO:0043190 ATP-binding cassette (ABC) transporter complex (C)	PMID:24169575	ECO:0000315 mutant phenotype evidence used in manual assertion	In Figure 4, ΔmacAB mutants rapidly lost viability in the presence of 1 mM H2O2 as compared to wild-type Salmonella, suggesting MacAB is required for resistance to hydrogen peroxide in vitro.	challenge
unacceptable	SALT1:D0ZSD6	2013-11-04 11:38:36 CST	GO:0043190 ATP-binding cassette (ABC) transporter complex (C)	PMID:24169575	ECO:0000315 mutant phenotype evidence used in manual assertion	In Figure 5, wild-type Salmonella transcomplements hydrogen peroxide sensitivity of the macAB mutant	challenge
acceptable	VIBF1:Q5E2S4	2013-11-04 11:57:05 CST	GO:0008218 bioluminescence (P)	PMID:12100554	ECO:0000315 mutant phenotype evidence used in manual assertion	In Figure 5, V. fischeri strain PMF8, in which litR was insertionally inactivated, showed delayed onset of luminescence induction and emitted only about 20% as much light per cell as its parent.	challenge
acceptable	VIBHA:LUXO	2013-11-10 16:09:08 CST	GO:0008218 bioluminescence (P)	PMID:12675810	ECO:0000315 mutant phenotype evidence used in manual assertion	In Figure 1, the intensity of luminescence was higher in luxO– mutant than in wild-type cells early in growth	challenge
unacceptable	VIBHA:LUXO	2013-11-10 16:18:27 CST	GO:0008218 bioluminescence (P)	PMID:12675810	ECO:0000315 mutant phenotype evidence used in manual assertion	In Figure 4, the presence of luxRvh strongly stimulated luminescence in the V. harveyi luxO null mutant	challenge

acceptable:4
unacceptable:3
requires_changes:0
flagged:0

Annotations challenged by Smahoney2

Status	Author,Group	Page	GO Term (Aspect)	Reference	Evidence	Links	Page history
updatedbyinstructor	Dbilling, Team Green Machine	BACTK:B5SRV2	GO:0003867 - obsolete 4-aminobutyrate transaminase activity (F)	PMID:19854901	ECO:0000315 mutant phenotype evidence used in manual assertion	challenge	C: 1 fixed by Smahoney2

1 annotations fixed by Smahoney2