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VIBF1:Q5E2S4
Contents
| Species (Taxon ID) | Vibrio fischeri (strain ATCC 700601 / ES114). (312309) | |
| Gene Name(s) | litR (ECO:0000313 with EMBL:AAW86672.1) | |
| Protein Name(s) | Quorum sensing transcriptional regulator LitR (HapR) (ECO:0000313 with EMBL:AAW86672.1) | |
| External Links | ||
| UniProt | Q5E2S4 | |
| EMBL | CP000020 | |
| RefSeq | YP_205560.1 | |
| ProteinModelPortal | Q5E2S4 | |
| SMR | Q5E2S4 | |
| STRING | 312309.VF_2177 | |
| EnsemblBacteria | AAW86672 | |
| GeneID | 3277730 | |
| KEGG | vfi:VF_2177 | |
| PATRIC | 20115102 | |
| eggNOG | NOG67920 | |
| HOGENOM | HOG000282746 | |
| KO | K10913 | |
| OMA | HVVRQFS | |
| BioCyc | AFIS312309:GIWP-2303-MONOMER | |
| Proteomes | UP000000537 | |
| GO | GO:0003677 GO:0006355 GO:0006351 | |
| Gene3D | 1.10.357.10 | |
| InterPro | IPR009057 IPR001647 IPR015893 IPR011075 | |
| Pfam | PF00440 | |
| PRINTS | PR00455 | |
| SUPFAM | SSF46689 SSF48498 | |
| PROSITE | PS50977 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
| GO:0010628 |
positive regulation of gene expression |
ECO:0000314 |
P |
Table 2: shows the effect of LitR on the expression of beta-galactosidase. |
complete | |||||
| GO:0008218 |
bioluminescence |
ECO:0000315 |
P |
In Figure 5, V. fischeri strain PMF8, in which litR was insertionally inactivated, showed delayed onset of luminescence induction and emitted only about 20% as much light per cell as its parent. |
complete | |||||
|
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0008218 |
bioluminescence |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000323 |
imported automatically asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
UniRule:UR000414560 |
F |
Seeded From UniProt |
complete | ||
Notes
References
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