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User:ORichter

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CACAO Phage Hunters 2018

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
acceptableLAMBD:SPAN22018-03-04 19:10:43 CSTGO:0019076 cytolysis (P)PMID:28040784ECO:0000314 direct assay evidence used in manual assertion

Only the C-terminal R153 residue is dispensable; there are lysis-defective nonsense mutations at positions 151 and 152 shown (Table 3) in the CTD region. A nonsense mutation (Rz C152X) shows the same effect as lysogen carrying an empty pRE plasmid vector (Vector), inhibiting cytolysis (Figure 3). The wild type pRz (WT), pRz with an artificial transmembrane domain (ART-TMD), and pRz 100–115 (Ser-Gly) show effective cytolysis in Figure 3.

challenge
acceptableSTRCL:BLIP2018-04-15 20:27:30 CDTGO:0033252 regulation of beta-lactamase activity (P)PMID:21238457ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 3 shows the interaction between K74G BLIP (a beta-lactamase inhibitory protein mutant) with S. aureus PC1 wild-type β-lactamase and its A104E (beta-lactamase) mutant. K74G BLIP has greater inhibitory effect on the wild type beta-lactamase than the mutant beta-lactamase. Table 2 includes the inhibition constant of the purified K74G BLIP variant for PC1 β-lactamase, which shows about a 10-fold increase in comparison to that of wild type BLIP.

challenge

acceptable:2
unacceptable:0
requires_changes:0
flagged:0

Annotations challenged by ORichter

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history
acceptableHPaudel,
Team Green B 2018
BPT5:TMPGO:0061783 - peptidoglycan muralytic activity (F)PMID:18348984ECO:0000314 direct assay evidence used in manual assertionchallengeC: 3

0 annotations fixed by ORichter

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