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BPT5:TMP
Contents
Species (Taxon ID) | Escherichia phage T5 (Enterobacteria phage T5). (10726) | |
Gene Name(s) | D18-19 (ECO:0000312 with EMBL:AAQ92756.2) | |
Protein Name(s) | Probable tape measure protein (ECO:0000303 with PMID:18348984[1])
Tail protein pb2 (ECO:0000303 with PMID:24198424[2]) | |
External Links | ||
UniProt | Q6QGE7 | |
EMBL | AY543070 AY692264 AY587007 | |
RefSeq | YP_006968.1 | |
ProteinModelPortal | Q6QGE7 | |
SMR | Q6QGE7 | |
GeneID | 2777629 | |
KEGG | vg:2777629 | |
OrthoDB | VOG0900000A | |
Proteomes | UP000002107 UP000002141 UP000002503 | |
GO | GO:0098015 GO:0003824 GO:0019835 GO:0042742 GO:0098932 GO:0085027 GO:0008152 GO:0044694 GO:0099001 GO:0098003 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0098015 |
virus tail |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
GO:0061783 |
peptidoglycan muralytic activity |
ECO:0000314 |
F |
According to the paper the protein specifically the C terminus end is involved in the degradation of peptidoglycan . The protein has peptidoglycan hydrolase activity. When mixed with peptidoglycan it was shown to give products and degrade peptidoglycan using it as a substrate. Figure six shows the hydrolytic capability of the protein by comparing it to sonicated ( sonication is a method used to disrupt cell membranes) cells. With the PB2-Cterm we can see that the B galactosidase coming out from the bacteria reached a level 60 percent to that of sonicated cells. Which is further proof of peptidoglycan hyrolysis. The control designed for this part was only adding DDM which didn't end up causing any B galactosidase to come out of the bacteria. |
complete | |||||
involved_in |
GO:0085027 |
entry into host via enzymatic degradation of host anatomical structure |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0098003 |
viral tail assembly |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0019012 |
virion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042742 |
defense response to bacterium |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0098932 |
disruption by virus of host cell wall peptidoglycan during virus entry |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046718 |
viral entry into host cell |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0098003 |
viral tail assembly |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0099001 |
viral genome ejection through host cell envelope, long flexible tail mechanism |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0019835 |
cytolysis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003824 |
catalytic activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0098994 |
disruption of host cell envelope during viral entry |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0044694 |
pore-mediated entry of viral genome into host cell |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Boulanger, P et al. (2008) Phage T5 straight tail fiber is a multifunctional protein acting as a tape measure and carrying fusogenic and muralytic activities. J. Biol. Chem. 283 13556-64 PubMed GONUTS page
- ↑ 2.0 2.1 Zivanovic, Y et al. (2014) Insights into bacteriophage T5 structure from analysis of its morphogenesis genes and protein components. J. Virol. 88 1162-74 PubMed GONUTS page
e
s
- Siphoviridae
- GO:0098932 ! symbiont entry into host cell via disruption of host cell wall peptidoglycan
- GO:0046718 ! symbiont entry into host cell
- GO:0098994 ! symbiont entry into host cell via disruption of host cell envelope
- GO:0099001 ! symbiont genome ejection through host cell envelope, long flexible tail mechanism
- GO:0044694 ! symbiont genome entry into host cell via pore formation in plasma membrane
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