GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

User:Jlensmire

From GONUTS
Jump to: navigation, search

My Annotations

StatusPageDate/TimeGO Term (Aspect)ReferenceEvidenceNotesLinks
unacceptableCAEEL:APN12013-09-14 21:18:52 CDTGO:0006284 base-excision repair (P)PMID:22819077ECO:0000247 sequence alignment evidence used in manual assertion

Figure 1 shows C.elegans APN-1 shows homology to Yeast Apn1, which is involved in DNA repair

challenge
acceptableCAEEL:APN12013-09-15 11:59:26 CDTGO:0017005 3'-tyrosyl-DNA phosphodiesterase activity (F)PMID:22819077ECO:0000314 direct assay evidence used in manual assertion

Figure 10C shows that APN-1 exhibits a 3' repair diesterase activity

challenge
acceptableCAEEL:APN12013-09-15 12:17:10 CDTGO:0006284 base-excision repair (P)PMID:22819077ECO:0000314 direct assay evidence used in manual assertion

Figure 10 shows that APN-1 has the ability to repair various DNA lesions

challenge
updatedbyinstructorBOMMO:Q5CCJ52013-09-15 12:36:31 CDTGO:0008284 positive regulation of cell proliferation (P)PMID:23781494ECO:0000314 direct assay evidence used in manual assertion

Figure 6

challenge
acceptableSALTI:MGTC2013-09-15 13:21:17 CDTGO:0009405 pathogenesis (P)PMID:19436747ECO:0000315 mutant phenotype evidence used in manual assertion

Figure 2. MgtC mutants showed decreased survival in human cells as compared to the WT

challenge
unacceptableNEIGO:RECA2013-09-29 09:48:57 CDTGO:0006310 DNA recombination (P)PMID:21359151ECO:0000247 sequence alignment evidence used in manual assertion

Figure 1 shows an amino acid sequence alignment of recA from N. gonorrhoeae aligned to E.coli

challenge
updatedbyinstructorNEIGO:RECA2013-09-29 09:54:19 CDTGO:0016887 ATPase activity (F)PMID:21359151ECO:0000314 direct assay evidence used in manual assertion

Figure 5 measures the amount of ATP hydrolyzed by RecA over time during strand exchange

challenge
requireschangesNEIG2:B4RKU52013-09-29 10:03:23 CDTGO:0006260 DNA replication (P)PMID:21359151ECO:0000247 sequence alignment evidence used in manual assertion

Figure 1 shows the amino acid sequence alignment between SSB of Neisseria gonorrhoeae and SSB in E.coli

challenge
requireschangesCAPHI:C5IZH42013-10-07 18:21:48 CDTGO:0006950 response to stress (P)PMID:22110953ECO:0000247 sequence alignment evidence used in manual assertion

Figure 2 shows the predicted amino acid sequence of HSP70 from goat to HSP 70 of cattle

challenge

acceptable:3
unacceptable:2
requires_changes:2
flagged:0

Annotations challenged by Jlensmire

StatusAuthor,GroupPageGO Term (Aspect)ReferenceEvidenceLinksPage history

0 annotations fixed by Jlensmire

What do the icons mean in the status column?

assessment icons.jpg