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SCHPO:MSH3

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Species (Taxon ID) Schizosaccharomyces pombe (Fission yeast). (taxon:4896)
Gene Name(s) msh3 ( synonyms: swi4 )
Protein Name(s)
  • DNA mismatch repair protein msh3
  • MutS protein homolog 3
  • Mating-type switching protein swi4
External Links
UniProt Identifier MSH3_SCHPO
UniProt Accessions P26359,
EMBL X61306, CU329670,
PIR S22569,
RefSeq NP_593952.1,
Pfam PF01624, PF05188, PF05192, PF05190, PF00488,

Annotations

Qualifier GO ID GO term name Reference(s) Evidence Code with/from Aspect Notes Status
GO:0000166

nucleotide binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0547

F

GO:0003677

DNA binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0238

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000432

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007695

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007696

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007860

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007861

F

GO:0005524

ATP binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016151

F

GO:0005524

ATP binding

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0067

F

GO:0005634

nucleus

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0539

C

GO:0005634

nucleus

GO_REF:0000023

IEA: Inferred from Electronic Annotation

SP_SL:SL-0191

C

GO:0005634

nucleus

PMID:16823372[1]

IDA: Inferred from Direct Assay

C

GO:0006281

DNA repair

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0234

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000432

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007695

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007696

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007860

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007861

P

GO:0006298

mismatch repair

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016151

P

GO:0006974

response to DNA damage stimulus

GO_REF:0000004

IEA: Inferred from Electronic Annotation

SP_KW:KW-0227

P

GO:0007131

reciprocal meiotic recombination

PMID:11333218[2]

IMP: Inferred from Mutant Phenotype

P

GO:0007534

gene conversion at mating-type locus

PMID:6587363[3]

IMP: Inferred from Mutant Phenotype

P

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR000432

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007695

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007696

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007860

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR007861

F

GO:0030983

mismatched DNA binding

GO_REF:0000002

IEA: Inferred from Electronic Annotation

InterPro:IPR016151

F

GO:0043570

maintenance of DNA repeat elements

PMID:11333219[4]

IMP: Inferred from Mutant Phenotype

P

NOT

GO:0006298

mismatch repair

PMID:11333218[2]

TAS: Traceable Author Statement

P

GO:0000794

condensed nuclear chromosome

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN26

C

Seeded From PANTHER

GO:0003006

reproductive developmental process

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN26

P

Seeded From PANTHER

GO:0003684

damaged DNA binding

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN26

F

Seeded From PANTHER

GO:0006298

mismatch repair

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN292

P

Seeded From PANTHER

GO:0006298

mismatch repair

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN24

P

Seeded From PANTHER

GO:0006310

DNA recombination

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN292

P

Seeded From PANTHER

GO:0007126

meiosis

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN279

P

Seeded From PANTHER

GO:0007126

meiosis

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN26

P

Seeded From PANTHER

GO:0016887

ATPase activity

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN24

F

Seeded From PANTHER

GO:0030983

mismatched DNA binding

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN278

F

Seeded From PANTHER

GO:0030983

mismatched DNA binding

PMID:17208035[5]

ISS: Inferred from Sequence or Structural Similarity

PTHR11361:AN24

F

Seeded From PANTHER


Notes

References

See Help:References for how to manage references in GONUTS.

  1. Matsuyama, A et al. (2006) ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 24 841-7 PubMed GONUTS page
  2. 2.0 2.1 Tornier, C et al. (2001) Requirement for Msh6, but not for Swi4 (Msh3), in Msh2-dependent repair of base-base mismatches and mononucleotide loops in Schizosaccharomyces pombe. Genetics 158 65-75 PubMed GONUTS page
  3. Egel, R et al. (1984) Genes required for initiation and resolution steps of mating-type switching in fission yeast. Proc. Natl. Acad. Sci. U.S.A. 81 3481-5 PubMed GONUTS page
  4. Mansour, AA et al. (2001) Control of GT repeat stability in Schizosaccharomyces pombe by mismatch repair factors. Genetics 158 77-85 PubMed GONUTS page
  5. 5.00 5.01 5.02 5.03 5.04 5.05 5.06 5.07 5.08 5.09 5.10 Thomas, PD et al. (2007) Ontology annotation: mapping genomic regions to biological function. Curr Opin Chem Biol 11 4-11 PubMed GONUTS page