RAT:SND1

Species (Taxon ID)	Rattus norvegicus (Rat). (10116)
Gene Name(s)	Snd1
Protein Name(s)	Staphylococcal nuclease domain-containing protein 1 100 kDa coactivator SND p102 p100 co-activator p105 coactivator
External Links
UniProt	Q66X93
EMBL	AY697864 BC072471 U83883
RefSeq	NP_073185.2
UniGene	Rn.36148
ProteinModelPortal	Q66X93
SMR	Q66X93
IntAct	Q66X93
STRING	10116.ENSRNOP00000045936
PhosphoSite	Q66X93
PaxDb	Q66X93
PRIDE	Q66X93
Ensembl	ENSRNOT00000047698
GeneID	64635
KEGG	rno:64635
UCSC	RGD:631340
CTD	27044
RGD	631340
eggNOG	COG1525
GeneTree	ENSGT00510000047270
HOVERGEN	HBG057234
InParanoid	Q66X93
KO	K15979
OMA	IQVPQDD
OrthoDB	EOG7FJGZT
PhylomeDB	Q66X93
NextBio	613608
PRO	PR:Q66X93
Proteomes	UP000002494
ExpressionAtlas	Q66X93
Genevestigator	Q66X93
GO	GO:0097433 GO:0070062 GO:0042470 GO:0016020 GO:0005739 GO:0005634 GO:0016442 GO:0004518 GO:0044822 GO:0003713 GO:0031047 GO:0001649 GO:0006355 GO:0006351
Gene3D	2.40.50.90
InterPro	IPR016685 IPR016071 IPR002071 IPR002999
Pfam	PF00565 PF00567
PIRSF	PIRSF017179
SMART	SM00318 SM00333
SUPFAM	SSF50199
PROSITE	PS01284 PS50830 PS50304

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
involved_in	GO:0006401	RNA catabolic process		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000266557 TAIR:locus:2159218 TAIR:locus:2183359 UniProtKB:Q7KZF4	P		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0035121 MGI:MGI:1924735 MGI:MGI:1929266 PANTHER:PTN000266556 TAIR:locus:2159218 TAIR:locus:2183359	C		Seeded From UniProt	complete
part_of	GO:0005634	nucleus		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0035121 MGI:MGI:1929266 PANTHER:PTN000959239 UniProtKB:Q8II01 WB:WBGene00006626	C		Seeded From UniProt	complete
enables	GO:0004518	nuclease activity		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0035121 PANTHER:PTN000266556 TAIR:locus:2078486 UniProtKB:O32001 UniProtKB:Q8II01	F		Seeded From UniProt	complete
enables	GO:0003723	RNA binding		ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000266557 TAIR:locus:2159218 TAIR:locus:2183359 UniProtKB:Q7KZF4 UniProtKB:Q8II01	F		Seeded From UniProt	complete
involved_in	GO:0090305	nucleic acid phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004518	P		Seeded From UniProt	complete
involved_in	GO:0090305	nucleic acid phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004519	P		Seeded From UniProt	complete
involved_in	GO:0090305	nucleic acid phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0004518	P		Seeded From UniProt	complete
involved_in	GO:0090305	nucleic acid phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004519	P		Seeded From UniProt	complete
involved_in	GO:0090305	nucleic acid phosphodiester bond hydrolysis	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004518	P		Seeded From UniProt	complete
involved_in	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic	GO_REF:0000108	ECO:0000366	evidence based on logical inference from automatic annotation used in automatic assertion	GO:0004521	P		Seeded From UniProt	complete
involved_in	GO:1903508	positive regulation of nucleic acid-templated transcription	GO_REF:0000108	ECO:0000364	evidence based on logical inference from manual annotation used in automatic assertion	GO:0003713	P		Seeded From UniProt	complete
part_of	GO:0097433	dense body	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q78PY7 ensembl:ENSMUSP00000001460	C		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q78PY7 ensembl:ENSMUSP00000001460	C		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q78PY7 ensembl:ENSMUSP00000001460	C		Seeded From UniProt	complete
enables	GO:1905172	RISC complex binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q7KZF4 ensembl:ENSP00000346762	F		Seeded From UniProt	complete
involved_in	GO:0010587	miRNA catabolic process	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q7KZF4 ensembl:ENSP00000346762	P		Seeded From UniProt	complete
involved_in	GO:0010564	regulation of cell cycle process	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q7KZF4 ensembl:ENSP00000346762	P		Seeded From UniProt	complete
part_of	GO:0005829	cytosol	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q7KZF4 ensembl:ENSP00000346762	C		Seeded From UniProt	complete
enables	GO:0004521	endoribonuclease activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q7KZF4 ensembl:ENSP00000346762	F		Seeded From UniProt	complete
enables	GO:0004519	endonuclease activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q7KZF4 ensembl:ENSP00000346762	F		Seeded From UniProt	complete
enables	GO:0003723	RNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q7KZF4 ensembl:ENSP00000346762	F		Seeded From UniProt	complete
part_of	GO:0005829	cytosol	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:A0A140VK49 ensembl:ENSP00000346762	C		Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002071	F		Seeded From UniProt	complete
enables	GO:0004518	nuclease activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002071	F		Seeded From UniProt	complete
part_of	GO:0016442	RISC complex	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR016685	C		Seeded From UniProt	complete
involved_in	GO:0031047	gene silencing by RNA	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR016685	P		Seeded From UniProt	complete
enables	GO:0003713	transcription coactivator activity		ECO:0000304	author statement supported by traceable reference used in manual assertion		F		Seeded From UniProt	complete
enables	GO:0016787	hydrolase activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0378	F		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C		Seeded From UniProt	complete
enables	GO:0004519	endonuclease activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0255	F		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C		Seeded From UniProt	complete
enables	GO:0004518	nuclease activity	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0540	F		Seeded From UniProt	complete
part_of	GO:0042470	melanosome	GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-SubCell:SL-0161	C		Seeded From UniProt	complete
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References

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