GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

RAT:KCC2D

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Rattus norvegicus (Rat). (10116)
Gene Name(s) Camk2d
Protein Name(s) Calcium/calmodulin-dependent protein kinase type II subunit delta

CaM kinase II subunit delta CaMK-II subunit delta

External Links
UniProt P15791
EMBL J05072
BC107562
L13406
L13407
L13408
X77192
X77193
X77194
X77195
X75774
PIR A34366
RefSeq NP_036651.1
UniGene Rn.87208
ProteinModelPortal P15791
SMR P15791
BioGrid 246431
IntAct P15791
MINT MINT-1892750
STRING 10116.ENSRNOP00000062118
ChEMBL CHEMBL2111382
PhosphoSite P15791
PaxDb P15791
PRIDE P15791
Ensembl ENSRNOT00000015564
ENSRNOT00000016026
ENSRNOT00000068198
GeneID 24246
KEGG rno:24246
CTD 817
RGD 2263
eggNOG COG0515
GeneTree ENSGT00760000118944
HOVERGEN HBG108055
InParanoid P15791
KO K04515
OMA GYTKICD
OrthoDB EOG7ZD1VM
PhylomeDB P15791
BRENDA 2.7.11.17
Reactome REACT_196389
REACT_196391
REACT_196392
REACT_196446
REACT_216105
REACT_258022
REACT_258198
NextBio 602745
Proteomes UP000002494
ExpressionAtlas P15791
Genevestigator P15791
GO GO:0005737
GO:0005829
GO:0005634
GO:0048471
GO:0043234
GO:0042383
GO:0033017
GO:0005524
GO:0004683
GO:0044325
GO:0050998
GO:0017080
GO:0086003
GO:0061049
GO:0030007
GO:0032469
GO:0018105
GO:0018107
GO:0010613
GO:0070374
GO:0035022
GO:0014911
GO:0048661
GO:0046777
GO:0006468
GO:0098901
GO:0098909
GO:0010881
GO:0010649
GO:1901844
GO:0060341
GO:0010389
GO:1902514
GO:1901897
GO:0010880
GO:2000649
GO:0055119
GO:0001666
InterPro IPR020636
IPR013543
IPR011009
IPR000719
IPR017441
IPR002290
IPR008271
PANTHER PTHR24347
Pfam PF08332
PF00069
SMART SM00220
SUPFAM SSF56112
PROSITE PS00107
PS50011
PS00108

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status
GO:0004683

calmodulin-dependent protein kinase activity

PMID:22514276[1]

ECO:0000314

F

Figure 1B. Immunoblot of HEK293 cells expressing Nav1.5 were exposed to rat CAMKIIdC showing phosphorylation of site on loop 1 of sodium channel.

complete
CACAO 8126

GO:0004672

protein kinase activity

PMID:22514276[1]

ECO:0000315

F

Figure 5: Electrophysiology of channel with mutant phenotype T594A and S516A and also in comparison to drug AIP and WT phenotypes

complete
CACAO 8153

GO:0005954

calcium- and calmodulin-dependent protein kinase complex

PMID:21677263[2]

ECO:0000314

C

Figure 3: Immunoblot shows CaMKIId forms complex and increases activity of sodium channel

complete
CACAO 8167

involved_in

GO:1903076

regulation of protein localization to plasma membrane

PMID:19188609[3]

ECO:0000316

genetic interaction evidence used in manual assertion

ComplexPortal:CPX-1134,UniProtKB:P08413,UniProtKB:P11275,UniProtKB:P11730

P

Seeded From UniProt

complete

involved_in

GO:0010666

positive regulation of cardiac muscle cell apoptotic process

PMID:23702479[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

part_of:(GO:0071277)

Seeded From UniProt

complete

enables

GO:0004672

protein kinase activity

PMID:22514276[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:22514276[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0010649

regulation of cell communication by electrical coupling

PMID:12676813[5]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(CL:0002131)

Seeded From UniProt

complete

involved_in

GO:1901844

regulation of cell communication by electrical coupling involved in cardiac conduction

PMID:12676813[5]

ECO:0000305

curator inference used in manual assertion

GO:0010649

P

Seeded From UniProt

complete

involved_in

GO:0098909

regulation of cardiac muscle cell action potential involved in regulation of contraction

PMID:12676813[5]

ECO:0000305

curator inference used in manual assertion

GO:0098901

P

Seeded From UniProt

complete

involved_in

GO:0010881

regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion

PMID:12676813[5]

ECO:0000305

curator inference used in manual assertion

GO:0010880

P

Seeded From UniProt

complete

involved_in

GO:0098901

regulation of cardiac muscle cell action potential

PMID:12676813[5]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(CL:0002131)

Seeded From UniProt

complete

involved_in

GO:0010880

regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum

PMID:12676813[5]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(CL:0002131)

Seeded From UniProt

complete

involved_in

GO:1902514

regulation of calcium ion transmembrane transport via high voltage-gated calcium channel

PMID:12676813[5]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(CL:0002131)

Seeded From UniProt

complete

involved_in

GO:0032469

endoplasmic reticulum calcium ion homeostasis

PMID:12676813[5]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(CL:0002131)|occurs_in:(GO:0016529)

Seeded From UniProt

complete

involved_in

GO:1901897

regulation of relaxation of cardiac muscle

PMID:23283722[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0086003

cardiac muscle cell contraction

PMID:12676814[7]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(UBERON:0002082)

Seeded From UniProt

complete

involved_in

GO:0055119

relaxation of cardiac muscle

PMID:12676814[7]

ECO:0000314

direct assay evidence used in manual assertion

P

occurs_in:(UBERON:0002082)

Seeded From UniProt

complete

enables

GO:0044325

ion channel binding

PMID:12676814[7]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:E9Q401

F

occurs_in:(UBERON:0002082)

Seeded From UniProt

complete

involved_in

GO:0018107

peptidyl-threonine phosphorylation

PMID:12676814[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0018105

peptidyl-serine phosphorylation

PMID:12676814[7]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006468

protein phosphorylation

PMID:23283722[6]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:12676814[7]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(UBERON:0000948)

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:12676814[7]

ECO:0000314

direct assay evidence used in manual assertion

C

part_of:(UBERON:0000948)

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:12676814[7]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:23283722[6]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0060341

regulation of cellular localization

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q13557

P

Seeded From UniProt

complete

involved_in

GO:0010613

positive regulation of cardiac muscle hypertrophy

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q13557

P

Seeded From UniProt

complete

involved_in

GO:0006468

protein phosphorylation

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q13557

P

Seeded From UniProt

complete

involved_in

GO:2000573

positive regulation of DNA biosynthetic process

PMID:17267544[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:1904707

positive regulation of vascular smooth muscle cell proliferation

PMID:17267544[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0070374

positive regulation of ERK1 and ERK2 cascade

PMID:18385282[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0061049

cell growth involved in cardiac muscle cell development

PMID:21554860[10]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0050998

nitric-oxide synthase binding

PMID:17293490[11]

ECO:0000353

physical interaction evidence used in manual assertion

RGD:3185

F

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

PMID:18385282[9]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0048471

perinuclear region of cytoplasm

PMID:17293490[11]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0046777

protein autophosphorylation

PMID:11925434[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0044325

ion channel binding

PMID:18205403[13]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0035022

positive regulation of Rac protein signal transduction

PMID:18385282[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:22360269[14]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0030007

cellular potassium ion homeostasis

PMID:11925434[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0014911

positive regulation of smooth muscle cell migration

PMID:18385282[9]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010971

positive regulation of G2/M transition of mitotic cell cycle

PMID:17267544[8]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005829

cytosol

PMID:8390994[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:9930758[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:11925434[12]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0001666

response to hypoxia

PMID:11925434[12]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0043005

neuron projection

PMID:21873635[17]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN002389359
WB:WBGene00006779

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

PMID:21873635[17]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1341265
PANTHER:PTN002389359
RGD:2263

C

Seeded From UniProt

complete

enables

GO:0005516

calmodulin binding

PMID:21873635[17]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:88256
PANTHER:PTN002389359
UniProtKB:Q13557
UniProtKB:Q9UQM7

F

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

PMID:21873635[17]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0264607
MGI:MGI:88256
MGI:MGI:88257
PANTHER:PTN002389359
RGD:2261
RGD:2262
RGD:2263
RGD:621802
UniProtKB:Q13557
UniProtKB:Q9UQM7
WB:WBGene00006779

F

Seeded From UniProt

complete

enables

GO:0004672

protein kinase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000719
InterPro:IPR008271

F

Seeded From UniProt

complete

enables

GO:0004674

protein serine/threonine kinase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR039071

F

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013543
InterPro:IPR039071

F

Seeded From UniProt

complete

enables

GO:0005516

calmodulin binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR013543

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000719
InterPro:IPR017441

F

Seeded From UniProt

complete

involved_in

GO:0006468

protein phosphorylation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000719
InterPro:IPR008271
InterPro:IPR013543

P

Seeded From UniProt

complete

enables

GO:0004683

calmodulin-dependent protein kinase activity

GO_REF:0000003

ECO:0000501

evidence used in automatic assertion

EC:2.7.11.17

F

Seeded From UniProt

complete

involved_in

GO:0016310

phosphorylation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0418

P

Seeded From UniProt

complete

enables

GO:0005516

calmodulin binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0112

F

Seeded From UniProt

complete

enables

GO:0004674

protein serine/threonine kinase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0723

F

Seeded From UniProt

complete

enables

GO:0016301

kinase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0418

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

part_of

GO:0016020

membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0472

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0016529

sarcoplasmic reticulum

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0703

C

Seeded From UniProt

complete

part_of

GO:0005886

plasma membrane

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-1003

C

Seeded From UniProt

complete

enables

GO:0016740

transferase activity

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0808

F

Seeded From UniProt

complete

part_of

GO:0033017

sarcoplasmic reticulum membrane

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0241

C

Seeded From UniProt

complete

part_of

GO:0042383

sarcolemma

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0238

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Ashpole, NM et al. (2012) Ca2+/calmodulin-dependent protein kinase II (CaMKII) regulates cardiac sodium channel NaV1.5 gating by multiple phosphorylation sites. J. Biol. Chem. 287 19856-69 PubMed GONUTS page
  2. Yao, L et al. (2011) Nav1.5-dependent persistent Na+ influx activates CaMKII in rat ventricular myocytes and N1325S mice. Am. J. Physiol., Cell Physiol. 301 C577-86 PubMed GONUTS page
  3. De Felice, FG et al. (2009) Protection of synapses against Alzheimer's-linked toxins: insulin signaling prevents the pathogenic binding of Abeta oligomers. Proc. Natl. Acad. Sci. U.S.A. 106 1971-6 PubMed GONUTS page
  4. Cha, MJ et al. (2013) MicroRNA-145 suppresses ROS-induced Ca2+ overload of cardiomyocytes by targeting CaMKIIδ. Biochem. Biophys. Res. Commun. 435 720-6 PubMed GONUTS page
  5. 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 Maier, LS et al. (2003) Transgenic CaMKIIdeltaC overexpression uniquely alters cardiac myocyte Ca2+ handling: reduced SR Ca2+ load and activated SR Ca2+ release. Circ. Res. 92 904-11 PubMed GONUTS page
  6. 6.0 6.1 6.2 Hamdani, N et al. (2013) Crucial role for Ca2(+)/calmodulin-dependent protein kinase-II in regulating diastolic stress of normal and failing hearts via titin phosphorylation. Circ. Res. 112 664-74 PubMed GONUTS page
  7. 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.7 Zhang, T et al. (2003) The deltaC isoform of CaMKII is activated in cardiac hypertrophy and induces dilated cardiomyopathy and heart failure. Circ. Res. 92 912-9 PubMed GONUTS page
  8. 8.0 8.1 8.2 House, SJ et al. (2007) Calcium/calmodulin-dependent protein kinase II-delta isoform regulation of vascular smooth muscle cell proliferation. Am. J. Physiol., Cell Physiol. 292 C2276-87 PubMed GONUTS page
  9. 9.0 9.1 9.2 9.3 Mercure, MZ et al. (2008) CaM kinase II delta2-dependent regulation of vascular smooth muscle cell polarization and migration. Am. J. Physiol., Cell Physiol. 294 C1465-75 PubMed GONUTS page
  10. Li, C et al. (2011) The δA isoform of calmodulin kinase II mediates pathological cardiac hypertrophy by interfering with the HDAC4-MEF2 signaling pathway. Biochem. Biophys. Res. Commun. 409 125-30 PubMed GONUTS page
  11. 11.0 11.1 Jones, RJ et al. (2007) iNOS regulation by calcium/calmodulin-dependent protein kinase II in vascular smooth muscle. Am. J. Physiol. Heart Circ. Physiol. 292 H2634-42 PubMed GONUTS page
  12. 12.0 12.1 12.2 12.3 Balla, Z et al. (2002) Calcium/calmodulin-dependent protein kinase IIdelta 2 and gamma isoforms regulate potassium currents of rat brain capillary endothelial cells under hypoxic conditions. J. Biol. Chem. 277 21306-14 PubMed GONUTS page
  13. Grueter, CE et al. (2008) Differential regulated interactions of calcium/calmodulin-dependent protein kinase II with isoforms of voltage-gated calcium channel beta subunits. Biochemistry 47 1760-7 PubMed GONUTS page
  14. Ginnan, R et al. (2012) MEF2 is regulated by CaMKIIδ2 and a HDAC4-HDAC5 heterodimer in vascular smooth muscle cells. Biochem. J. 444 105-14 PubMed GONUTS page
  15. Schworer, CM et al. (1993) Identification of novel isoforms of the delta subunit of Ca2+/calmodulin-dependent protein kinase II. Differential expression in rat brain and aorta. J. Biol. Chem. 268 14443-9 PubMed GONUTS page
  16. Takeuchi, Y et al. (1999) Nuclear localization of the delta subunit of Ca2+/calmodulin-dependent protein kinase II in rat cerebellar granule cells. J. Neurochem. 72 815-25 PubMed GONUTS page
  17. 17.0 17.1 17.2 17.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page