RAT:CNBP

Species (Taxon ID)	Rattus norvegicus (Rat). (10116)
Gene Name(s)	Cnbp (synonyms: Znf9)
Protein Name(s)	Cellular nucleic acid-binding protein CNBP Zinc finger protein 9
External Links
UniProt	P62634
EMBL	D45254 AF242550 AY329624 AB158421 AB158422 BC062225
PIR	JC2512
RefSeq	NP_072120.1
UniGene	Rn.6187
ProteinModelPortal	P62634
SMR	P62634
BioGrid	249114
PhosphoSite	P62634
PaxDb	P62634
PRIDE	P62634
Ensembl	ENSRNOT00000013884
GeneID	64530
KEGG	rno:64530
CTD	7555
RGD	621807
eggNOG	COG5082
GeneTree	ENSGT00510000047065
HOGENOM	HOG000186262
HOVERGEN	HBG000397
InParanoid	P62634
KO	K09250
OMA	CPNGQGG
OrthoDB	EOG790G22
PhylomeDB	P62634
NextBio	29559
PRO	PR:P62634
Proteomes	UP000002494
ExpressionAtlas	P62634
Genevestigator	P62634
GO	GO:0005829 GO:0005783 GO:0005634 GO:0044822 GO:0003697 GO:0003727 GO:0008270 GO:0008284 GO:0045944 GO:0045893 GO:0006351
Gene3D	4.10.60.10
InterPro	IPR001878
Pfam	PF00098
SMART	SM00343
SUPFAM	SSF57756
PROSITE	PS50158

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Extension	Notes	Status
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P53996	P		Seeded From UniProt	complete
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P53996	P		Seeded From UniProt	complete
involved_in	GO:0008284	positive regulation of cell population proliferation	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P53996	P		Seeded From UniProt	complete
part_of	GO:0005829	cytosol	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P53996	C		Seeded From UniProt	complete
part_of	GO:0005783	endoplasmic reticulum	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P53996	C		Seeded From UniProt	complete
NOT|part_of	GO:0005634	nucleus	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P53996	C		Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:P53996	C		Seeded From UniProt	complete
enables	GO:0003727	single-stranded RNA binding	PMID:7788528	ECO:0000314	direct assay evidence used in manual assertion		F		Seeded From UniProt	complete
enables	GO:0003697	single-stranded DNA binding	PMID:7788528	ECO:0000314	direct assay evidence used in manual assertion		F		Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P53996 ensembl:ENSMUSP00000032138	P		Seeded From UniProt	complete
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P53996 ensembl:ENSMUSP00000032138	P		Seeded From UniProt	complete
involved_in	GO:0008284	positive regulation of cell population proliferation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P53996 ensembl:ENSMUSP00000032138	P		Seeded From UniProt	complete
part_of	GO:0005829	cytosol	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P53996 ensembl:ENSMUSP00000032138	C		Seeded From UniProt	complete
part_of	GO:0005783	endoplasmic reticulum	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P53996 ensembl:ENSMUSP00000032138	C		Seeded From UniProt	complete
enables	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P62633 ensembl:ENSP00000410769	F		Seeded From UniProt	complete
enables	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P62633 ensembl:ENSP00000410769	F		Seeded From UniProt	complete
involved_in	GO:0000122	negative regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:P62633 ensembl:ENSP00000410769	P		Seeded From UniProt	complete
enables	GO:0003676	nucleic acid binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001878 InterPro:IPR036875	F		Seeded From UniProt	complete
enables	GO:0008270	zinc ion binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001878 InterPro:IPR036875	F		Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F		Seeded From UniProt	complete
enables	GO:0046872	metal ion binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0479	F		Seeded From UniProt	complete
part_of	GO:0005737	cytoplasm	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0963 UniProtKB-SubCell:SL-0086	C		Seeded From UniProt	complete
part_of	GO:0005783	endoplasmic reticulum	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0256 UniProtKB-SubCell:SL-0095	C		Seeded From UniProt	complete
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References

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