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ORYSJ:MADS6

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Species (Taxon ID) Oryza sativa subsp. japonica (Rice). (39947)
Gene Name(s) MADS6 (synonyms: MFO1)
Protein Name(s) MADS-box transcription factor 6

OsMADS6 Protein MOSAIC FLORAL ORGANS 1

External Links
UniProt Q6EU39
EMBL U78782
FJ666318
AP004178
AP008208
CM000139
AK069103
PIR T04167
RefSeq NP_001047749.1
UniGene Os.7271
ProteinModelPortal Q6EU39
IntAct Q6EU39
STRING 39947.LOC_Os02g45770.1
EnsemblPlants OS02T0682200-01
GeneID 4330328
KEGG osa:4330328
Gramene Q6EU39
eggNOG COG5068
HOGENOM HOG000155301
InParanoid Q6EU39
KO K09264
OMA GYPHQFV
Reactome REACT_203586
Proteomes UP000000763
GO GO:0005634
GO:0003677
GO:0003700
GO:0030154
GO:0010022
GO:0045893
GO:0010093
GO:0006351
InterPro IPR002487
IPR002100
Pfam PF01486
PF00319
PRINTS PR00404
SMART SM00432
SUPFAM SSF55455
PROSITE PS51297
PS00350
PS50066

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0048455

stamen formation

PMID:9820190[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0009553

embryo sac development

PMID:9820190[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0080112

seed growth

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0080060

integument development

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048833

specification of floral organ number

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048459

floral whorl structural organization

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048457

floral whorl morphogenesis

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048455

stamen formation

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048437

floral organ development

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048316

seed development

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010582

floral meristem determinacy

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010094

specification of carpel identity

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010093

specification of floral organ identity

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0009553

embryo sac development

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048509

regulation of meristem development

PMID:19820190[2]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:Q10PZ9

P

Seeded From UniProt

complete

involved_in

GO:0048449

floral organ formation

PMID:19820190[2]

ECO:0000316

genetic interaction evidence used in manual assertion

UniProtKB:Q6EU39

P

Seeded From UniProt

complete

involved_in

GO:0048437

floral organ development

PMID:19820190[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:19820190[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

PMID:19820190[2]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010093

specification of floral organ identity

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0010022

meristem determinacy

PMID:19820190[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0048481

plant ovule development

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000235584
TAIR:locus:2098826

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000235373
TAIR:locus:2137070

F

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:106658
PANTHER:PTN000235373
RGD:1559787
TAIR:locus:2041233
TAIR:locus:2121924
TAIR:locus:2152511
UniProtKB:Q38876

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000235373
TAIR:locus:2005522
UniProtKB:P11831

F

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000235373
UniProtKB:Q9XJ66

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[3]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0004101
MGI:MGI:106658
PANTHER:PTN000235373
RGD:1559787
SGD:S000004645
SGD:S000004646
TAIR:locus:2005522
TAIR:locus:2033273
TAIR:locus:2041233
TAIR:locus:2047304
TAIR:locus:2121924
TAIR:locus:2127213
TAIR:locus:2137070
TAIR:locus:2152511
UniProtKB:O22456
UniProtKB:P11831
UniProtKB:P17839
UniProtKB:Q8VXG0
UniProtKB:Q9FPN7
WB:WBGene00006844
ZFIN:ZDB-GENE-990714-29

C

Seeded From UniProt

complete

enables

GO:0000977

RNA polymerase II regulatory region sequence-specific DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033896

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002100
InterPro:IPR036879

F

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002487

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002487

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002487

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR033896

P

Seeded From UniProt

complete

enables

GO:0046983

protein dimerization activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR002100
InterPro:IPR036879

F

Seeded From UniProt

complete

enables

GO:0046983

protein dimerization activity

PMID:19820190[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

PMID:19820190[2]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

involved_in

GO:0009908

flower development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0287

P

Seeded From UniProt

complete

involved_in

GO:0030154

cell differentiation

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0221

P

Seeded From UniProt

complete

involved_in

GO:0007275

multicellular organism development

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0217

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Key, TJ (1998) Low-fat high-carbohydrate diet and plasma sex hormones. Br. J. Cancer 78 1256-7 PubMed GONUTS page
  2. 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 Ohmori, S et al. (2009) MOSAIC FLORAL ORGANS1, an AGL6-like MADS box gene, regulates floral organ identity and meristem fate in rice. Plant Cell 21 3008-25 PubMed GONUTS page
  3. 3.0 3.1 3.2 3.3 3.4 3.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page