ORYSJ:MADS6

Species (Taxon ID)	Oryza sativa subsp. japonica (Rice). (39947)
Gene Name(s)	MADS6 (synonyms: MFO1)
Protein Name(s)	MADS-box transcription factor 6 OsMADS6 Protein MOSAIC FLORAL ORGANS 1
External Links
UniProt	Q6EU39
EMBL	U78782 FJ666318 AP004178 AP008208 CM000139 AK069103
PIR	T04167
RefSeq	NP_001047749.1
UniGene	Os.7271
ProteinModelPortal	Q6EU39
IntAct	Q6EU39
STRING	39947.LOC_Os02g45770.1
EnsemblPlants	OS02T0682200-01
GeneID	4330328
KEGG	osa:4330328
Gramene	Q6EU39
eggNOG	COG5068
HOGENOM	HOG000155301
InParanoid	Q6EU39
KO	K09264
OMA	GYPHQFV
Reactome	REACT_203586
Proteomes	UP000000763
GO	GO:0005634 GO:0003677 GO:0003700 GO:0030154 GO:0010022 GO:0045893 GO:0010093 GO:0006351
InterPro	IPR002487 IPR002100
Pfam	PF01486 PF00319
PRINTS	PR00404
SMART	SM00432
SUPFAM	SSF55455
PROSITE	PS51297 PS00350 PS50066

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
involved_in	GO:0048455	stamen formation	PMID:9820190^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009553	embryo sac development	PMID:9820190^[1]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0080112	seed growth	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0080060	integument development	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048833	specification of floral organ number	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048459	floral whorl structural organization	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048457	floral whorl morphogenesis	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048455	stamen formation	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048437	floral organ development	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048316	seed development	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010582	floral meristem determinacy	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010094	specification of carpel identity	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010093	specification of floral organ identity	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0009553	embryo sac development	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048509	regulation of meristem development	PMID:19820190^[2]	ECO:0000316	genetic interaction evidence used in manual assertion	UniProtKB:Q10PZ9	P	Seeded From UniProt	complete
involved_in	GO:0048449	floral organ formation	PMID:19820190^[2]	ECO:0000316	genetic interaction evidence used in manual assertion	UniProtKB:Q6EU39	P	Seeded From UniProt	complete
involved_in	GO:0048437	floral organ development	PMID:19820190^[2]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	PMID:19820190^[2]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	PMID:19820190^[2]	ECO:0000314	direct assay evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010093	specification of floral organ identity	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0010022	meristem determinacy	PMID:19820190^[2]	ECO:0000315	mutant phenotype evidence used in manual assertion		P	Seeded From UniProt	complete
involved_in	GO:0048481	plant ovule development	PMID:21873635^[3]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000235584 TAIR:locus:2098826	P	Seeded From UniProt	complete
enables	GO:0044212	transcription regulatory region DNA binding	PMID:21873635^[3]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000235373 TAIR:locus:2137070	F	Seeded From UniProt	complete
enables	GO:0043565	sequence-specific DNA binding	PMID:21873635^[3]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:106658 PANTHER:PTN000235373 RGD:1559787 TAIR:locus:2041233 TAIR:locus:2121924 TAIR:locus:2152511 UniProtKB:Q38876	F	Seeded From UniProt	complete
enables	GO:0008134	transcription factor binding	PMID:21873635^[3]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000235373 TAIR:locus:2005522 UniProtKB:P11831	F	Seeded From UniProt	complete
involved_in	GO:0007275	multicellular organism development	PMID:21873635^[3]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	PANTHER:PTN000235373 UniProtKB:Q9XJ66	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[3]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	FB:FBgn0004101 MGI:MGI:106658 PANTHER:PTN000235373 RGD:1559787 SGD:S000004645 SGD:S000004646 TAIR:locus:2005522 TAIR:locus:2033273 TAIR:locus:2041233 TAIR:locus:2047304 TAIR:locus:2121924 TAIR:locus:2127213 TAIR:locus:2137070 TAIR:locus:2152511 UniProtKB:O22456 UniProtKB:P11831 UniProtKB:P17839 UniProtKB:Q8VXG0 UniProtKB:Q9FPN7 WB:WBGene00006844 ZFIN:ZDB-GENE-990714-29	C	Seeded From UniProt	complete
enables	GO:0000977	RNA polymerase II regulatory region sequence-specific DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR033896	F	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002100 InterPro:IPR036879	F	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002487	F	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002487	C	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002487	P	Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR033896	P	Seeded From UniProt	complete
enables	GO:0046983	protein dimerization activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR002100 InterPro:IPR036879	F	Seeded From UniProt	complete
enables	GO:0046983	protein dimerization activity	PMID:19820190^[2]	ECO:0000304	author statement supported by traceable reference used in manual assertion		F	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	PMID:19820190^[2]	ECO:0000304	author statement supported by traceable reference used in manual assertion		F	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	GO_REF:0000037 GO_REF:0000039	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0539 UniProtKB-SubCell:SL-0191	C	Seeded From UniProt	complete
enables	GO:0003677	DNA binding	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0238	F	Seeded From UniProt	complete
involved_in	GO:0009908	flower development	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0287	P	Seeded From UniProt	complete
involved_in	GO:0030154	cell differentiation	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0221	P	Seeded From UniProt	complete
involved_in	GO:0007275	multicellular organism development	GO_REF:0000037	ECO:0000322	imported manually asserted information used in automatic assertion	UniProtKB-KW:KW-0217	P	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 Key, TJ (1998) Low-fat high-carbohydrate diet and plasma sex hormones. Br. J. Cancer 78 1256-7 PubMed GONUTS page
↑ ^2.00 ^2.01 ^2.02 ^2.03 ^2.04 ^2.05 ^2.06 ^2.07 ^2.08 ^2.09 ^2.10 ^2.11 ^2.12 ^2.13 ^2.14 ^2.15 ^2.16 ^2.17 ^2.18 ^2.19 ^2.20 Ohmori, S et al. (2009) MOSAIC FLORAL ORGANS1, an AGL6-like MADS box gene, regulates floral organ identity and meristem fate in rice. Plant Cell 21 3008-25 PubMed GONUTS page
↑ ^3.0 ^3.1 ^3.2 ^3.3 ^3.4 ^3.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:9820190-1] 1.0 ^1.1 Key, TJ (1998) Low-fat high-carbohydrate diet and plasma sex hormones. Br. J. Cancer 78 1256-7 PubMed GONUTS page

[PMID:19820190-2] 2.00 ^2.01 ^2.02 ^2.03 ^2.04 ^2.05 ^2.06 ^2.07 ^2.08 ^2.09 ^2.10 ^2.11 ^2.12 ^2.13 ^2.14 ^2.15 ^2.16 ^2.17 ^2.18 ^2.19 ^2.20 Ohmori, S et al. (2009) MOSAIC FLORAL ORGANS1, an AGL6-like MADS box gene, regulates floral organ identity and meristem fate in rice. Plant Cell 21 3008-25 PubMed GONUTS page

[PMID:21873635-3] 3.0 ^3.1 ^3.2 ^3.3 ^3.4 ^3.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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ORYSJ:MADS6

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