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MOUSE:TP53B
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Tp53bp1 (synonyms: Trp53bp1) | |
Protein Name(s) | Tumor suppressor p53-binding protein 1
53BP1 p53-binding protein 1 p53BP1 | |
External Links | ||
UniProt | P70399 | |
EMBL | AJ414734 BC035206 BC079906 U67885 | |
RefSeq | NP_001277759.1 NP_038763.3 | |
UniGene | Mm.215389 Mm.383499 Mm.481841 | |
PDB | 1SSF | |
PDBsum | 1SSF | |
ProteinModelPortal | P70399 | |
SMR | P70399 | |
BioGrid | 205144 | |
DIP | DIP-31595N | |
IntAct | P70399 | |
MINT | MINT-136714 | |
PhosphoSite | P70399 | |
MaxQB | P70399 | |
PaxDb | P70399 | |
PRIDE | P70399 | |
GeneID | 27223 | |
KEGG | mmu:27223 | |
CTD | 27223 | |
MGI | MGI:1351320 | |
eggNOG | NOG264535 | |
HOGENOM | HOG000231961 | |
HOVERGEN | HBG060882 | |
InParanoid | P70399 | |
EvolutionaryTrace | P70399 | |
NextBio | 305136 | |
PRO | PR:P70399 | |
Proteomes | UP000000589 | |
Genevestigator | P70399 | |
GO | GO:0000777 GO:0000776 GO:0005634 GO:0005657 GO:0003684 GO:0035064 GO:0043565 GO:0042162 GO:0008134 GO:0006974 GO:0006281 GO:0006355 GO:0006351 | |
Gene3D | 2.30.30.30 3.40.50.10190 | |
InterPro | IPR015125 IPR001357 IPR014722 | |
Pfam | PF09038 | |
SMART | SM00292 | |
SUPFAM | SSF52113 | |
PROSITE | PS50172 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0035861 |
site of double-strand break |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0035064 |
methylated histone binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0035861 |
site of double-strand break |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000042 |
negative regulation of double-strand break repair via homologous recombination |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000042 |
negative regulation of double-strand break repair via homologous recombination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045830 |
positive regulation of isotype switching |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045830 |
positive regulation of isotype switching |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0061649 |
ubiquitin modification-dependent histone binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051260 |
protein homooligomerization |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035064 |
methylated histone binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001809041 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042393 |
histone binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001809041 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1351320 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000077 |
DNA damage checkpoint |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001809041 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:2000042 |
negative regulation of double-strand break repair via homologous recombination |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:1990391 |
DNA repair complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0061649 |
ubiquitin modification-dependent histone binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051260 |
protein homooligomerization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045830 |
positive regulation of isotype switching |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042162 |
telomeric DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0035861 |
site of double-strand break |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0035064 |
methylated histone binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016604 |
nuclear body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016604 |
nuclear body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006281 |
DNA repair |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005657 |
replication fork |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:1308039 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003712 |
transcription coregulator activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003684 |
damaged DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0002039 |
p53 binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0001102 |
RNA polymerase II activating transcription factor binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000784 |
nuclear chromosome, telomeric region |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0000781 |
chromosome, telomeric region |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000776 |
kinetochore |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071481 |
cellular response to X-ray |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:F1M842 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:F1M842 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:2000042 |
negative regulation of double-strand break repair via homologous recombination |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0061649 |
ubiquitin modification-dependent histone binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051260 |
protein homooligomerization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045830 |
positive regulation of isotype switching |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0035861 |
site of double-strand break |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0035064 |
methylated histone binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0016604 |
nuclear body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003712 |
transcription coregulator activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0002039 |
p53 binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001102 |
RNA polymerase II activating transcription factor binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000781 |
chromosome, telomeric region |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q12888 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0008134 |
transcription factor binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000776 |
kinetochore |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0000775 |
chromosome, centromeric region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000777 |
condensed chromosome kinetochore |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Hartlerode, AJ et al. (2012) Impact of histone H4 lysine 20 methylation on 53BP1 responses to chromosomal double strand breaks. PLoS ONE 7 e49211 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Chapman, JR et al. (2013) RIF1 is essential for 53BP1-dependent nonhomologous end joining and suppression of DNA double-strand break resection. Mol. Cell 49 858-71 PubMed GONUTS page
- ↑ 3.0 3.1 Bunting, SF et al. (2010) 53BP1 inhibits homologous recombination in Brca1-deficient cells by blocking resection of DNA breaks. Cell 141 243-54 PubMed GONUTS page
- ↑ Ward, IM et al. (2004) 53BP1 is required for class switch recombination. J. Cell Biol. 165 459-64 PubMed GONUTS page
- ↑ Manis, JP et al. (2004) 53BP1 links DNA damage-response pathways to immunoglobulin heavy chain class-switch recombination. Nat. Immunol. 5 481-7 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Mosammaparast, N et al. (2013) The histone demethylase LSD1/KDM1A promotes the DNA damage response. J. Cell Biol. 203 457-70 PubMed GONUTS page
- ↑ Pei, H et al. (2013) The histone methyltransferase MMSET regulates class switch recombination. J. Immunol. 190 756-63 PubMed GONUTS page
- ↑ He, H et al. (2006) POT1b protects telomeres from end-to-end chromosomal fusions and aberrant homologous recombination. EMBO J. 25 5180-90 PubMed GONUTS page
- ↑ Krishnan, V et al. (2011) Histone H4 lysine 16 hypoacetylation is associated with defective DNA repair and premature senescence in Zmpste24-deficient mice. Proc. Natl. Acad. Sci. U.S.A. 108 12325-30 PubMed GONUTS page
- ↑ Cho, YW et al. (2007) PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex. J. Biol. Chem. 282 20395-406 PubMed GONUTS page
- ↑ 12.0 12.1 Sengupta, S et al. (2004) Functional interaction between BLM helicase and 53BP1 in a Chk1-mediated pathway during S-phase arrest. J. Cell Biol. 166 801-13 PubMed GONUTS page
- ↑ Park, E et al. (2013) Inactivation of Uaf1 causes defective homologous recombination and early embryonic lethality in mice. Mol. Cell. Biol. 33 4360-70 PubMed GONUTS page
- ↑ Celeste, A et al. (2002) Genomic instability in mice lacking histone H2AX. Science 296 922-7 PubMed GONUTS page
- ↑ Adelman, CA et al. (2009) Rad50 is dispensable for the maintenance and viability of postmitotic tissues. Mol. Cell. Biol. 29 483-92 PubMed GONUTS page
- ↑ Jullien, D et al. (2002) Kinetochore localisation of the DNA damage response component 53BP1 during mitosis. J. Cell. Sci. 115 71-9 PubMed GONUTS page
- ↑ 17.0 17.1 Datta, B et al. (1996) p202, an interferon-inducible modulator of transcription, inhibits transcriptional activation by the p53 tumor suppressor protein, and a segment from the p53-binding protein 1 that binds to p202 overcomes this inhibition. J. Biol. Chem. 271 27544-55 PubMed GONUTS page
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