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MOUSE:TP53B

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Species (Taxon ID) Mus musculus (Mouse). (10090)
Gene Name(s) Tp53bp1 (synonyms: Trp53bp1)
Protein Name(s) Tumor suppressor p53-binding protein 1

53BP1 p53-binding protein 1 p53BP1

External Links
UniProt P70399
EMBL AJ414734
BC035206
BC079906
U67885
RefSeq NP_001277759.1
NP_038763.3
UniGene Mm.215389
Mm.383499
Mm.481841
PDB 1SSF
PDBsum 1SSF
ProteinModelPortal P70399
SMR P70399
BioGrid 205144
DIP DIP-31595N
IntAct P70399
MINT MINT-136714
PhosphoSite P70399
MaxQB P70399
PaxDb P70399
PRIDE P70399
GeneID 27223
KEGG mmu:27223
CTD 27223
MGI MGI:1351320
eggNOG NOG264535
HOGENOM HOG000231961
HOVERGEN HBG060882
InParanoid P70399
EvolutionaryTrace P70399
NextBio 305136
PRO PR:P70399
Proteomes UP000000589
Genevestigator P70399
GO GO:0000777
GO:0000776
GO:0005634
GO:0005657
GO:0003684
GO:0035064
GO:0043565
GO:0042162
GO:0008134
GO:0006974
GO:0006281
GO:0006355
GO:0006351
Gene3D 2.30.30.30
3.40.50.10190
InterPro IPR015125
IPR001357
IPR014722
Pfam PF09038
SMART SM00292
SUPFAM SSF52113
PROSITE PS50172

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0035861

site of double-strand break

PMID:23209566[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0035064

methylated histone binding

PMID:23209566[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0035861

site of double-strand break

PMID:23333305[2]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:2000042

negative regulation of double-strand break repair via homologous recombination

PMID:23333305[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006303

double-strand break repair via nonhomologous end joining

PMID:23333305[2]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:2000042

negative regulation of double-strand break repair via homologous recombination

PMID:20362325[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006303

double-strand break repair via nonhomologous end joining

PMID:20362325[3]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045830

positive regulation of isotype switching

PMID:15159415[4]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045830

positive regulation of isotype switching

PMID:15077110[5]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0061649

ubiquitin modification-dependent histone binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q12888

F

Seeded From UniProt

complete

involved_in

GO:0051260

protein homooligomerization

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q12888

P

Seeded From UniProt

complete

enables

GO:0035064

methylated histone binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q12888

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001809041
SGD:S000002625
UniProtKB:Q12888

P

Seeded From UniProt

complete

enables

GO:0042393

histone binding

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001809041
SGD:S000002625

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1351320
PANTHER:PTN001809041
PomBase:SPBC342.05
RGD:1308039
UniProtKB:Q12888

C

Seeded From UniProt

complete

involved_in

GO:0000077

DNA damage checkpoint

PMID:21873635[6]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001809041
SGD:S000002625
UniProtKB:A0A1D8PNH8

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:2000042

negative regulation of double-strand break repair via homologous recombination

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

P

Seeded From UniProt

complete

part_of

GO:1990391

DNA repair complex

PMID:24217620[7]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0061649

ubiquitin modification-dependent histone binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0051260

protein homooligomerization

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0045830

positive regulation of isotype switching

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

PMID:23241889[8]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0042162

telomeric DNA binding

PMID:17053789[9]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0035861

site of double-strand break

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

C

Seeded From UniProt

complete

enables

GO:0035064

methylated histone binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

F

Seeded From UniProt

complete

part_of

GO:0016604

nuclear body

PMID:21746928[10]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0016604

nuclear body

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

C

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006974

cellular response to DNA damage stimulus

PMID:17500065[11]

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006303

double-strand break repair via nonhomologous end joining

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

P

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006281

DNA repair

PMID:15364958[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

C

Seeded From UniProt

complete

part_of

GO:0005657

replication fork

PMID:15364958[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:24001775[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

RGD:1308039

C

Seeded From UniProt

complete

enables

GO:0003712

transcription coregulator activity

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

F

Seeded From UniProt

complete

enables

GO:0003684

damaged DNA binding

PMID:11934988[14]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0002039

p53 binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

F

Seeded From UniProt

complete

enables

GO:0001102

RNA polymerase II activating transcription factor binding

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

F

Seeded From UniProt

complete

part_of

GO:0000784

nuclear chromosome, telomeric region

PMID:19001091[15]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

colocalizes_with

GO:0000781

chromosome, telomeric region

GO_REF:0000096

ECO:0000266

sequence orthology evidence used in manual assertion

UniProtKB:Q12888

C

Seeded From UniProt

complete

part_of

GO:0000776

kinetochore

PMID:11801725[16]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0071481

cellular response to X-ray

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:F1M842
ensembl:ENSRNOP00000019025

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:F1M842
ensembl:ENSRNOP00000019025

C

Seeded From UniProt

complete

involved_in

GO:2000042

negative regulation of double-strand break repair via homologous recombination

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

P

Seeded From UniProt

complete

enables

GO:0061649

ubiquitin modification-dependent histone binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

F

Seeded From UniProt

complete

involved_in

GO:0051260

protein homooligomerization

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

P

Seeded From UniProt

complete

involved_in

GO:0045830

positive regulation of isotype switching

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

P

Seeded From UniProt

complete

part_of

GO:0035861

site of double-strand break

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

C

Seeded From UniProt

complete

enables

GO:0035064

methylated histone binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

F

Seeded From UniProt

complete

part_of

GO:0016604

nuclear body

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

C

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

P

Seeded From UniProt

complete

involved_in

GO:0006303

double-strand break repair via nonhomologous end joining

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

C

Seeded From UniProt

complete

enables

GO:0003712

transcription coregulator activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

F

Seeded From UniProt

complete

enables

GO:0002039

p53 binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

F

Seeded From UniProt

complete

enables

GO:0001102

RNA polymerase II activating transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

F

Seeded From UniProt

complete

part_of

GO:0000781

chromosome, telomeric region

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q12888
ensembl:ENSP00000371475

C

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:8910340[17]

ECO:0000304

author statement supported by traceable reference used in manual assertion

F

Seeded From UniProt

complete

acts_upstream_of_or_within

GO:0006355

regulation of transcription, DNA-templated

PMID:8910340[17]

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005694

chromosome

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0158
UniProtKB-SubCell:SL-0468

C

Seeded From UniProt

complete

part_of

GO:0000776

kinetochore

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0995

C

Seeded From UniProt

complete

involved_in

GO:0006281

DNA repair

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0234

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

involved_in

GO:0006974

cellular response to DNA damage stimulus

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0227

P

Seeded From UniProt

complete

part_of

GO:0000775

chromosome, centromeric region

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0137

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

part_of

GO:0000777

condensed chromosome kinetochore

GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-SubCell:SL-0149

C

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Hartlerode, AJ et al. (2012) Impact of histone H4 lysine 20 methylation on 53BP1 responses to chromosomal double strand breaks. PLoS ONE 7 e49211 PubMed GONUTS page
  2. 2.0 2.1 2.2 Chapman, JR et al. (2013) RIF1 is essential for 53BP1-dependent nonhomologous end joining and suppression of DNA double-strand break resection. Mol. Cell 49 858-71 PubMed GONUTS page
  3. 3.0 3.1 Bunting, SF et al. (2010) 53BP1 inhibits homologous recombination in Brca1-deficient cells by blocking resection of DNA breaks. Cell 141 243-54 PubMed GONUTS page
  4. Ward, IM et al. (2004) 53BP1 is required for class switch recombination. J. Cell Biol. 165 459-64 PubMed GONUTS page
  5. Manis, JP et al. (2004) 53BP1 links DNA damage-response pathways to immunoglobulin heavy chain class-switch recombination. Nat. Immunol. 5 481-7 PubMed GONUTS page
  6. 6.0 6.1 6.2 6.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
  7. Mosammaparast, N et al. (2013) The histone demethylase LSD1/KDM1A promotes the DNA damage response. J. Cell Biol. 203 457-70 PubMed GONUTS page
  8. Pei, H et al. (2013) The histone methyltransferase MMSET regulates class switch recombination. J. Immunol. 190 756-63 PubMed GONUTS page
  9. He, H et al. (2006) POT1b protects telomeres from end-to-end chromosomal fusions and aberrant homologous recombination. EMBO J. 25 5180-90 PubMed GONUTS page
  10. Krishnan, V et al. (2011) Histone H4 lysine 16 hypoacetylation is associated with defective DNA repair and premature senescence in Zmpste24-deficient mice. Proc. Natl. Acad. Sci. U.S.A. 108 12325-30 PubMed GONUTS page
  11. Cho, YW et al. (2007) PTIP associates with MLL3- and MLL4-containing histone H3 lysine 4 methyltransferase complex. J. Biol. Chem. 282 20395-406 PubMed GONUTS page
  12. 12.0 12.1 Sengupta, S et al. (2004) Functional interaction between BLM helicase and 53BP1 in a Chk1-mediated pathway during S-phase arrest. J. Cell Biol. 166 801-13 PubMed GONUTS page
  13. Park, E et al. (2013) Inactivation of Uaf1 causes defective homologous recombination and early embryonic lethality in mice. Mol. Cell. Biol. 33 4360-70 PubMed GONUTS page
  14. Celeste, A et al. (2002) Genomic instability in mice lacking histone H2AX. Science 296 922-7 PubMed GONUTS page
  15. Adelman, CA et al. (2009) Rad50 is dispensable for the maintenance and viability of postmitotic tissues. Mol. Cell. Biol. 29 483-92 PubMed GONUTS page
  16. Jullien, D et al. (2002) Kinetochore localisation of the DNA damage response component 53BP1 during mitosis. J. Cell. Sci. 115 71-9 PubMed GONUTS page
  17. 17.0 17.1 Datta, B et al. (1996) p202, an interferon-inducible modulator of transcription, inhibits transcriptional activation by the p53 tumor suppressor protein, and a segment from the p53-binding protein 1 that binds to p202 overcomes this inhibition. J. Biol. Chem. 271 27544-55 PubMed GONUTS page