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MOUSE:SNAI1
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Snai1 (synonyms: Sna) | |
Protein Name(s) | Zinc finger protein SNAI1
Protein snail homolog 1 Protein sna | |
External Links | ||
UniProt | Q02085 | |
EMBL | M95604 X67253 BC034857 U95961 | |
CCDS | CCDS17102.1 | |
PIR | A49149 | |
RefSeq | NP_035557.1 | |
UniGene | Mm.2093 | |
ProteinModelPortal | Q02085 | |
SMR | Q02085 | |
BioGrid | 203361 | |
IntAct | Q02085 | |
STRING | 10090.ENSMUSP00000050581 | |
PhosphoSite | Q02085 | |
PRIDE | Q02085 | |
Ensembl | ENSMUST00000052631 | |
GeneID | 20613 | |
KEGG | mmu:20613 | |
UCSC | uc008nzy.1 | |
CTD | 6615 | |
MGI | MGI:98330 | |
eggNOG | COG5048 | |
HOGENOM | HOG000261665 | |
HOVERGEN | HBG007477 | |
InParanoid | Q02085 | |
KO | K05707 | |
OMA | CNKEYLS | |
OrthoDB | EOG7P2XSG | |
PhylomeDB | Q02085 | |
TreeFam | TF315515 | |
NextBio | 298979 | |
PRO | PR:Q02085 | |
Proteomes | UP000000589 | |
Bgee | Q02085 | |
CleanEx | MM_SNAI1 | |
ExpressionAtlas | Q02085 | |
Genevestigator | Q02085 | |
GO | GO:0005737 GO:0005634 GO:0046872 GO:0001078 GO:0000977 GO:0001227 GO:0043565 GO:0060536 GO:0016477 GO:0001837 GO:0003198 GO:0031069 GO:0060972 GO:0007498 GO:0001707 GO:0060806 GO:0043518 GO:1902230 GO:0000122 GO:0045892 GO:0010957 GO:0061314 GO:0001649 GO:0060021 GO:0030335 GO:0010718 GO:0045893 GO:2000810 GO:0006357 GO:0060707 | |
Gene3D | 3.30.160.60 | |
InterPro | IPR029795 IPR007087 IPR015880 IPR013087 | |
PANTHER | PTHR11389:SF430 | |
Pfam | PF00096 | |
SMART | SM00355 | |
PROSITE | PS00028 PS50157 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0010718 |
positive regulation of epithelial to mesenchymal transition |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005721 |
pericentric heterochromatin |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070828 |
heterochromatin organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0001227 |
DNA-binding transcription repressor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000977 |
RNA polymerase II regulatory region sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
has_regulation_target:(NCBI_Gene:25412) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061314 |
Notch signaling involved in heart development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030335 |
positive regulation of cell migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010718 |
positive regulation of epithelial to mesenchymal transition |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0003198 |
epithelial to mesenchymal transition involved in endocardial cushion formation |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001837 |
epithelial to mesenchymal transition |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001837 |
epithelial to mesenchymal transition |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001837 |
epithelial to mesenchymal transition |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001707 |
mesoderm formation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0037618 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0000286 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0037618 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003448 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:2000810 |
regulation of bicellular tight junction assembly |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:1902230 |
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0070888 |
E-box binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060972 |
left/right pattern formation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:2183156 |
P |
occurs_in:(EMAPA:16039)|occurs_in:(EMAPA:16039) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0060806 |
negative regulation of cell differentiation involved in embryonic placenta development |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060707 |
trophoblast giant cell differentiation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060536 |
cartilage morphogenesis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1096393 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0060021 |
roof of mouth development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1096393 |
P |
results_in_development_of:(EMAPA:17930) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0043518 |
negative regulation of DNA damage response, signal transduction by p53 class mediator |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0031069 |
hair follicle morphogenesis |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0030335 |
positive regulation of cell migration |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0019900 |
kinase binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0016477 |
cell migration |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1096393 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0010957 |
negative regulation of vitamin D biosynthetic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010718 |
positive regulation of epithelial to mesenchymal transition |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007498 |
mesoderm development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:2183156 |
P |
results_in_development_of:(EMAPA:16097) |
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:96920 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005721 |
pericentric heterochromatin |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0001837 |
epithelial to mesenchymal transition |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0001227 |
DNA-binding transcription repressor activity, RNA polymerase II-specific |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_regulation_target:(MGI:MGI:98505) |
Seeded From UniProt |
complete | ||
enables |
GO:0001227 |
DNA-binding transcription repressor activity, RNA polymerase II-specific |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000977 |
RNA polymerase II regulatory region sequence-specific DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000810 |
regulation of bicellular tight junction assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1902230 |
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0070888 |
E-box binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043518 |
negative regulation of DNA damage response, signal transduction by p53 class mediator |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030335 |
positive regulation of cell migration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0019900 |
kinase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010957 |
negative regulation of vitamin D biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010718 |
positive regulation of epithelial to mesenchymal transition |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005721 |
pericentric heterochromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001837 |
epithelial to mesenchymal transition |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001649 |
osteoblast differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0001227 |
DNA-binding transcription repressor activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000977 |
RNA polymerase II regulatory region sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O95863 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Millanes-Romero, A et al. (2013) Regulation of heterochromatin transcription by Snail1/LOXL2 during epithelial-to-mesenchymal transition. Mol. Cell 52 746-57 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Seki, K et al. (2003) Mouse Snail family transcription repressors regulate chondrocyte, extracellular matrix, type II collagen, and aggrecan. J. Biol. Chem. 278 41862-70 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Luna-Zurita, L et al. (2010) Integration of a Notch-dependent mesenchymal gene program and Bmp2-driven cell invasiveness regulates murine cardiac valve formation. J. Clin. Invest. 120 3493-507 PubMed GONUTS page
- ↑ Niessen, K et al. (2008) Slug is a direct Notch target required for initiation of cardiac cushion cellularization. J. Cell Biol. 182 315-25 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 Domínguez, D et al. (2003) Phosphorylation regulates the subcellular location and activity of the snail transcriptional repressor. Mol. Cell. Biol. 23 5078-89 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Cano, A et al. (2000) The transcription factor snail controls epithelial-mesenchymal transitions by repressing E-cadherin expression. Nat. Cell Biol. 2 76-83 PubMed GONUTS page
- ↑ Thuault, S et al. (2008) HMGA2 and Smads co-regulate SNAIL1 expression during induction of epithelial-to-mesenchymal transition. J. Biol. Chem. 283 33437-46 PubMed GONUTS page
- ↑ 8.0 8.1 Carver, EA et al. (2001) The mouse snail gene encodes a key regulator of the epithelial-mesenchymal transition. Mol. Cell. Biol. 21 8184-8 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 9.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 10.0 10.1 Murray, SA & Gridley, T (2006) Snail family genes are required for left-right asymmetry determination, but not neural crest formation, in mice. Proc. Natl. Acad. Sci. U.S.A. 103 10300-4 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 11.3 11.4 Nakayama, H et al. (1998) The transition to endoreduplication in trophoblast giant cells is regulated by the mSNA zinc finger transcription factor. Dev. Biol. 199 150-63 PubMed GONUTS page
- ↑ 12.0 12.1 12.2 Murray, SA et al. (2007) Multiple functions of Snail family genes during palate development in mice. Development 134 1789-97 PubMed GONUTS page
- ↑ 13.0 13.1 Jamora, C et al. (2005) A signaling pathway involving TGF-beta2 and snail in hair follicle morphogenesis. PLoS Biol. 3 e11 PubMed GONUTS page
- ↑ Boutet, A et al. (2006) Snail activation disrupts tissue homeostasis and induces fibrosis in the adult kidney. EMBO J. 25 5603-13 PubMed GONUTS page
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- GO:0010957 ! negative regulation of vitamin D biosynthetic process
- GO:0045892 ! negative regulation of DNA-templated transcription
- GO:0043518 ! negative regulation of DNA damage response, signal transduction by p53 class mediator
- GO:0000122 ! negative regulation of transcription by RNA polymerase II
- GO:0060806 ! negative regulation of cell differentiation involved in embryonic placenta development
- GO:1902230 ! negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage
- GO:0061314 ! Notch signaling involved in heart development
- GO:0003676 ! nucleic acid binding
- GO:0005634 ! nucleus
p
r
- GO:0006355 ! regulation of DNA-templated transcription
- GO:0006357 ! regulation of transcription by RNA polymerase II
- GO:2000810 ! regulation of bicellular tight junction assembly
- GO:0000977 ! RNA polymerase II transcription regulatory region sequence-specific DNA binding
- Rodentia
- GO:0060021 ! roof of mouth development