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MOUSE:LMNA
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Lmna (synonyms: Lmn1) | |
Protein Name(s) | Prelamin-A/C
Lamin-A/C | |
External Links | ||
UniProt | P48678 | |
EMBL | D49733 D49733 D49733 X14170 D14850 DQ832702 DQ832703 AK004619 AK147150 AK149998 AK150391 AK150501 AK150624 AK152539 AK152646 AK152846 AK161221 AK167858 CH466547 BC015302 BC094020 D13181 | |
CCDS | CCDS38482.1 CCDS38483.1 CCDS50951.1 | |
PIR | I53414 S04333 S18324 S28182 | |
RefSeq | NP_001002011.2 NP_001104572.1 NP_062263.1 XP_006501136.1 | |
UniGene | Mm.243014 Mm.471227 | |
PDB | 1UFG | |
PDBsum | 1UFG | |
ProteinModelPortal | P48678 | |
SMR | P48678 | |
BioGrid | 201176 | |
IntAct | P48678 | |
MINT | MINT-1868521 | |
STRING | 10090.ENSMUSP00000029699 | |
PhosphoSite | P48678 | |
REPRODUCTION-2DPAGE | IPI00400300 IPI00620256 | |
MaxQB | P48678 | |
PaxDb | P48678 | |
PRIDE | P48678 | |
Ensembl | ENSMUST00000029699 ENSMUST00000036252 ENSMUST00000120377 | |
GeneID | 16905 | |
KEGG | mmu:16905 | |
UCSC | uc008pvj.2 uc008pvk.2 | |
CTD | 4000 | |
MGI | MGI:96794 | |
eggNOG | NOG325506 | |
GeneTree | ENSGT00760000118905 | |
HOVERGEN | HBG013015 | |
InParanoid | P48678 | |
KO | K12641 | |
OMA | HCSGSGD | |
OrthoDB | EOG7MD4PW | |
PhylomeDB | P48678 | |
TreeFam | TF101181 | |
Reactome | REACT_106572 REACT_198626 REACT_208718 REACT_209025 REACT_210180 REACT_221677 REACT_75800 | |
ChiTaRS | Lmna | |
EvolutionaryTrace | P48678 | |
NextBio | 290934 | |
PRO | PR:P48678 | |
Proteomes | UP000000589 | |
Bgee | P48678 | |
CleanEx | MM_LMNA | |
ExpressionAtlas | P48678 | |
Genevestigator | P48678 | |
GO | GO:0005638 GO:0005635 GO:0005654 GO:0005634 GO:0048471 GO:0005198 GO:0071456 GO:0030010 GO:0030951 GO:0007517 GO:2001237 GO:0090201 GO:0006998 GO:0006997 GO:0090343 GO:0034504 GO:0030334 GO:1900180 GO:0035105 GO:0055015 | |
Gene3D | 2.60.40.1260 | |
InterPro | IPR001664 IPR018039 IPR001322 | |
PANTHER | PTHR23239 | |
Pfam | PF00038 PF00932 | |
SUPFAM | SSF74853 | |
PROSITE | PS00226 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0005783 |
endoplasmic reticulum |
PMID 10021336 |
ECO:0000314 |
C |
Immunohistochemical staining shows location of lamin alpha to follow distribution of ER - figure 6c |
Missing: reference | ||||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1903243 |
negative regulation of cardiac muscle hypertrophy in response to stress |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090343 |
positive regulation of cell aging |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030951 |
establishment or maintenance of microtubule cytoskeleton polarity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030334 |
regulation of cell migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030010 |
establishment of cell polarity |
ECO:0000303 |
author statement without traceable support used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007517 |
muscle organ development |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007517 |
muscle organ development |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090343 |
positive regulation of cell aging |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034504 |
protein localization to nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:2001237 |
negative regulation of extrinsic apoptotic signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:1904178 |
negative regulation of adipose tissue development |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620456 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:1900180 |
regulation of protein localization to nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:1900114 |
positive regulation of histone H3-K9 trimethylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090343 |
positive regulation of cell aging |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090201 |
negative regulation of release of cytochrome c from mitochondria |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0072201 |
negative regulation of mesenchymal cell proliferation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0055015 |
ventricular cardiac muscle cell development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:2177930 |
P |
|
Seeded From UniProt |
complete | |
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045669 |
positive regulation of osteoblast differentiation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620456 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0034613 |
cellular protein localization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0034504 |
protein localization to nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:2177930 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0032204 |
regulation of telomere maintenance |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0031965 |
nuclear membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0031965 |
nuclear membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0031647 |
regulation of protein stability |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016363 |
nuclear matrix |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620456 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0010628 |
positive regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0008285 |
negative regulation of cell population proliferation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008157 |
protein phosphatase 1 binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620456 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007517 |
muscle organ development |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006998 |
nuclear envelope organization |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1890508 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0006998 |
nuclear envelope organization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006997 |
nucleus organization |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1890508 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0006997 |
nucleus organization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:2177930 |
P |
|
Seeded From UniProt |
complete | |
acts_upstream_of_or_within |
GO:0006606 |
protein import into nucleus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:2177930 |
P |
|
Seeded From UniProt |
complete | |
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005638 |
lamin filament |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0005635 |
nuclear envelope |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:620456 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090343 |
positive regulation of cell aging |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02545 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071456 |
cellular response to hypoxia |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02545 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008285 |
negative regulation of cell population proliferation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02545 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02545 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02545 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P02545 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005198 |
structural molecule activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005882 |
intermediate filament |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-MMU-8868356 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005635 |
nuclear envelope |
Reactome:R-MMU-912355 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005882 |
intermediate filament |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005652 |
nuclear lamina |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005635 |
nuclear envelope |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Huang, ZP et al. (2015) Cardiomyocyte-enriched protein CIP protects against pathophysiological stresses and regulates cardiac homeostasis. J. Clin. Invest. 125 4122-34 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Lee, JS et al. (2007) Nuclear lamin A/C deficiency induces defects in cell mechanics, polarization, and migration. Biophys. J. 93 2542-52 PubMed GONUTS page
- ↑ Ahmady, E et al. (2011) Identification of a novel muscle A-type lamin-interacting protein (MLIP). J. Biol. Chem. 286 19702-13 PubMed GONUTS page
- ↑ Zhang, YQ & Sarge, KD (2008) Sumoylation regulates lamin A function and is lost in lamin A mutants associated with familial cardiomyopathies. J. Cell Biol. 182 35-9 PubMed GONUTS page
- ↑ 5.0 5.1 Lu, D et al. (2010) LMNA E82K mutation activates FAS and mitochondrial pathways of apoptosis in heart tissue specific transgenic mice. PLoS ONE 5 e15167 PubMed GONUTS page
- ↑ Borrego-Pinto, J et al. (2012) Samp1 is a component of TAN lines and is required for nuclear movement. J. Cell. Sci. 125 1099-105 PubMed GONUTS page
- ↑ 7.0 7.1 Liu, B et al. (2013) Depleting the methyltransferase Suv39h1 improves DNA repair and extends lifespan in a progeria mouse model. Nat Commun 4 1868 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 Liu, Y et al. (2012) Intracellular VEGF regulates the balance between osteoblast and adipocyte differentiation. J. Clin. Invest. 122 3101-13 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 Nikolova, V et al. (2004) Defects in nuclear structure and function promote dilated cardiomyopathy in lamin A/C-deficient mice. J. Clin. Invest. 113 357-69 PubMed GONUTS page
- ↑ Brachner, A et al. (2005) LEM2 is a novel MAN1-related inner nuclear membrane protein associated with A-type lamins. J. Cell. Sci. 118 5797-810 PubMed GONUTS page
- ↑ Heydemann, A et al. (2007) Nuclear sequestration of delta-sarcoglycan disrupts the nuclear localization of lamin A/C and emerin in cardiomyocytes. Hum. Mol. Genet. 16 355-63 PubMed GONUTS page
- ↑ Hilditch-Maguire, P et al. (2000) Huntingtin: an iron-regulated protein essential for normal nuclear and perinuclear organelles. Hum. Mol. Genet. 9 2789-97 PubMed GONUTS page
- ↑ Fong, LG et al. (2004) Heterozygosity for Lmna deficiency eliminates the progeria-like phenotypes in Zmpste24-deficient mice. Proc. Natl. Acad. Sci. U.S.A. 101 18111-6 PubMed GONUTS page
- ↑ Fong, LG et al. (2006) Prelamin A and lamin A appear to be dispensable in the nuclear lamina. J. Clin. Invest. 116 743-52 PubMed GONUTS page
- ↑ Furukawa, K et al. (1994) cDNA cloning and functional characterization of a meiosis-specific protein (MNS1) with apparent nuclear association. Chromosome Res. 2 99-113 PubMed GONUTS page
- ↑ Ibrahim, MX et al. (2013) Targeting isoprenylcysteine methylation ameliorates disease in a mouse model of progeria. Science 340 1330-3 PubMed GONUTS page
- ↑ Kim, CE et al. (2010) A molecular mechanism underlying the neural-specific defect in torsinA mutant mice. Proc. Natl. Acad. Sci. U.S.A. 107 9861-6 PubMed GONUTS page
- ↑ Lagarrigue, S et al. (2016) CDK4 is an essential insulin effector in adipocytes. J. Clin. Invest. 126 335-48 PubMed GONUTS page
- ↑ Yamada, M et al. (2010) Involvement of a novel preimplantation-specific gene encoding the high mobility group box protein Hmgpi in early embryonic development. Hum. Mol. Genet. 19 480-93 PubMed GONUTS page
- ↑ Dai, FF et al. (2006) The neuronal Ca2+ sensor protein visinin-like protein-1 is expressed in pancreatic islets and regulates insulin secretion. J. Biol. Chem. 281 21942-53 PubMed GONUTS page
- ↑ Muralikrishna, B et al. (2001) Distinct changes in intranuclear lamin A/C organization during myoblast differentiation. J. Cell. Sci. 114 4001-11 PubMed GONUTS page
- ↑ Maggi, LB Jr et al. (2008) Nucleophosmin serves as a rate-limiting nuclear export chaperone for the Mammalian ribosome. Mol. Cell. Biol. 28 7050-65 PubMed GONUTS page
- ↑ Ojeh, N et al. (2008) The MAGUK-family protein CASK is targeted to nuclei of the basal epidermis and controls keratinocyte proliferation. J. Cell. Sci. 121 2705-17 PubMed GONUTS page
c
e
g
n
- GO:0008285 ! negative regulation of cell population proliferation
- GO:0090201 ! negative regulation of release of cytochrome c from mitochondria
- GO:1903243 ! negative regulation of cardiac muscle hypertrophy in response to stress
- GO:2001237 ! negative regulation of extrinsic apoptotic signaling pathway
- GO:1904178 ! negative regulation of adipose tissue development
- GO:0072201 ! negative regulation of mesenchymal cell proliferation
- GO:0006998 ! nuclear envelope organization
- GO:0005635 ! nuclear envelope
- GO:0005652 ! nuclear lamina
- GO:0016363 ! nuclear matrix
- GO:0031965 ! nuclear membrane
- GO:0005654 ! nucleoplasm
- GO:0005634 ! nucleus
- GO:0006997 ! nucleus organization
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