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MOUSE:IRF5
Contents
| Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
| Gene Name(s) | Irf5 | |
| Protein Name(s) | Interferon regulatory factor 5
IRF-5 | |
| External Links | ||
| UniProt | P56477 | |
| EMBL | AF028725 | |
| CCDS | CCDS19962.1 | |
| RefSeq | NP_001239311.1 NP_036187.1 XP_006505160.1 | |
| UniGene | Mm.6479 | |
| ProteinModelPortal | P56477 | |
| SMR | P56477 | |
| BioGrid | 205111 | |
| IntAct | P56477 | |
| MINT | MINT-1565953 | |
| STRING | 10090.ENSMUSP00000004392 | |
| PhosphoSite | P56477 | |
| PaxDb | P56477 | |
| PRIDE | P56477 | |
| DNASU | 27056 | |
| Ensembl | ENSMUST00000004392 ENSMUST00000163511 | |
| GeneID | 27056 | |
| KEGG | mmu:27056 | |
| UCSC | uc009bdu.2 | |
| CTD | 3663 | |
| MGI | MGI:1350924 | |
| eggNOG | NOG45024 | |
| HOGENOM | HOG000037433 | |
| HOVERGEN | HBG105715 | |
| InParanoid | P56477 | |
| KO | K09446 | |
| OMA | YDGPRDM | |
| OrthoDB | EOG7CCBR1 | |
| PhylomeDB | P56477 | |
| TreeFam | TF328512 | |
| Reactome | REACT_198660 | |
| NextBio | 305003 | |
| PRO | PR:P56477 | |
| Proteomes | UP000000589 | |
| Bgee | P56477 | |
| CleanEx | MM_IRF5 | |
| ExpressionAtlas | P56477 | |
| Genevestigator | P56477 | |
| GO | GO:0005737 GO:0005634 GO:0000975 GO:0003700 GO:0051607 GO:0045087 GO:0043065 GO:0045944 GO:0032495 GO:0032494 GO:0006351 | |
| Gene3D | 1.10.10.10 2.60.200.10 | |
| InterPro | IPR019817 IPR001346 IPR019471 IPR029838 IPR017855 IPR008984 IPR011991 | |
| PANTHER | PTHR11949:SF10 | |
| Pfam | PF00605 PF10401 | |
| PRINTS | PR00267 | |
| SMART | SM00348 | |
| SUPFAM | SSF49879 | |
| PROSITE | PS00601 PS51507 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1096873 |
C |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0002376 |
immune system process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1096873 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1859212 |
F |
Seeded From UniProt |
complete | ||
|
acts_upstream_of_or_within |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
acts_upstream_of_or_within |
GO:0043065 |
positive regulation of apoptotic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
|
acts_upstream_of_or_within |
GO:0032495 |
response to muramyl dipeptide |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
acts_upstream_of_or_within |
GO:0032494 |
response to peptidoglycan |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13568 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0043565 |
sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13568 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0043065 |
positive regulation of apoptotic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13568 |
P |
Seeded From UniProt |
complete | ||
|
enables |
GO:0042802 |
identical protein binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13568 |
F |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032495 |
response to muramyl dipeptide |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13568 |
P |
Seeded From UniProt |
complete | ||
|
involved_in |
GO:0032494 |
response to peptidoglycan |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13568 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13568 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q13568 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0006357 |
regulation of transcription by RNA polymerase II |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0019221 |
cytokine-mediated signaling pathway |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0002376 |
immune system process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0045087 |
innate immune response |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Dixit, E et al. (2010) Peroxisomes are signaling platforms for antiviral innate immunity. Cell 141 668-81 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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