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MOUSE:HDAC6
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Hdac6 | |
Protein Name(s) | Histone deacetylase 6
HD6 Histone deacetylase mHDA2 | |
External Links | ||
UniProt | Q9Z2V5 | |
EMBL | AF006603 AL670169 | |
CCDS | CCDS40845.1 | |
PIR | T13964 | |
RefSeq | NP_001123888.1 NP_034543.3 XP_006527630.1 XP_017173877.1 XP_017173878.1 | |
UniGene | Mm.29854 | |
ProteinModelPortal | Q9Z2V5 | |
SMR | Q9Z2V5 | |
BioGrid | 200263 | |
DIP | DIP-36461N | |
IntAct | Q9Z2V5 | |
MINT | MINT-220628 | |
STRING | 10090.ENSMUSP00000033501 | |
BindingDB | Q9Z2V5 | |
ChEMBL | CHEMBL2878 | |
iPTMnet | Q9Z2V5 | |
PhosphoSitePlus | Q9Z2V5 | |
EPD | Q9Z2V5 | |
MaxQB | Q9Z2V5 | |
PaxDb | Q9Z2V5 | |
PeptideAtlas | Q9Z2V5 | |
PRIDE | Q9Z2V5 | |
Ensembl | ENSMUST00000033501 ENSMUST00000115642 | |
GeneID | 15185 | |
KEGG | mmu:15185 | |
UCSC | uc009snh.2 | |
CTD | 10013 | |
MGI | MGI:1333752 | |
eggNOG | KOG1343 COG0123 | |
GeneTree | ENSGT00530000062809 | |
HOGENOM | HOG000004769 | |
HOVERGEN | HBG051894 | |
InParanoid | Q9Z2V5 | |
KO | K11407 | |
OMA | QPHGFCI | |
OrthoDB | EOG091G0210 | |
TreeFam | TF106173 | |
BRENDA | 3.5.1.98 | |
Reactome | [www.reactome.org/content/detail/R-MMU-3371511 R-MMU-3371511] [www.reactome.org/content/detail/R-MMU-5617833 R-MMU-5617833] | |
PRO | PR:Q9Z2V5 | |
Proteomes | UP000000589 | |
Bgee | ENSMUSG00000031161 | |
CleanEx | MM_HDAC6 | |
ExpressionAtlas | Q9Z2V5 | |
Genevisible | Q9Z2V5 | |
GO | GO:0016235 GO:0030424 GO:0005901 GO:0044297 GO:0031252 GO:0005737 GO:0005829 GO:0030425 GO:0030286 GO:0000118 GO:0016234 GO:0005874 GO:0005875 GO:0043005 GO:0005654 GO:0005634 GO:0043204 GO:0048471 GO:0043234 GO:0003779 GO:0043014 GO:0008013 GO:0048487 GO:0001047 GO:0070840 GO:0004407 GO:0042826 GO:0051879 GO:0008017 GO:0051787 GO:0032041 GO:0031593 GO:0048156 GO:0042903 GO:0043130 GO:0031625 GO:0008270 GO:0070842 GO:0070301 GO:0071218 GO:0035967 GO:0048668 GO:0060997 GO:0016575 GO:0070846 GO:0006886 GO:0032418 GO:0051646 GO:0007026 GO:0043242 GO:0045861 GO:0061734 GO:0034983 GO:0070845 GO:0090035 GO:0010634 GO:1901300 GO:0098779 GO:0010870 GO:0009967 GO:0043241 GO:0006476 GO:0000209 GO:0006515 GO:0070201 GO:0045598 GO:0040029 GO:0016241 GO:0031647 GO:0010469 GO:0006355 GO:0070848 GO:0051788 GO:0010033 GO:0009636 GO:0006351 GO:0090042 GO:0006511 GO:0043162 | |
Gene3D | 3.30.40.10 3.40.800.20 | |
InterPro | IPR000286 IPR023801 IPR037138 IPR023696 IPR013083 IPR001607 | |
PANTHER | PTHR10625 | |
Pfam | PF00850 PF02148 | |
PRINTS | PR01270 | |
SMART | SM00290 | |
SUPFAM | SSF52768 | |
PROSITE | PS50271 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0031648 |
protein destabilization |
ECO:0000315 |
P |
The organism is H. Sapiens and the protein is HDAC6 or (Histone deacetylase 6) Figure 3C shows that knockdown of HDAC6 lowers the half life of MSH2 (MutS protein homolog 2) and “As shown in Figure 3C, wild-type HDAC6 (F-HD6, lanes 17–20), not the catalytically dead mutant of HDAC6 (F-HD6DM, lanes 13–16) or the DAC1-deficient mutant of HDAC6 (F-HD6[439–1215], lanes 21–24), could reduce the half-life of MSH2. “ Thus HDAC6 destabilizes MSH2 |
complete | |||||
GO:0000209 |
protein polyubiquitination |
ECO:0000315 |
P |
The Organism is Mus Musculus and the protein is HDAC6. Figure 4B shows that knocking out HDAC6 stops polyubiquitination and reintroducing wild type HDAC6 restores polyubiquitination of protein MSH2 |
complete | |||||
GO:0016575 |
histone deacetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Mouse; HDAC6 According to Figure 5C, HDAC6 is involved in core histone deacetylation. |
complete | ||||
GO:0004407 |
histone deacetylase activity |
ECO:0000315 |
F |
Mouse; HDAC6 According to Figure 5C, HDAC6 is involved in core histone deacetylation. |
complete | |||||
enables |
GO:0042903 |
tubulin deacetylase activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
occurs_in:(CL:0000540) |
Seeded From UniProt |
complete | ||
enables |
GO:0048156 |
tau protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
occurs_in:(UBERON:0000955) |
Seeded From UniProt |
complete | ||
NOT|enables |
GO:0047611 |
acetylspermidine deacetylase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
NOT|involved_in |
GO:0106048 |
spermidine deacetylation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
NOT|involved_in |
GO:0106047 |
polyamine deacetylation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0042903 |
tubulin deacetylase activity |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034983 |
peptidyl-lysine deacetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_input:(UniProtKB:P10637) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033138 |
positive regulation of peptidyl-serine phosphorylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
has_regulation_target:(UniProtKB:P10637) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051646 |
mitochondrion localization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0098779 |
positive regulation of mitophagy in response to mitochondrial depolarization |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090042 |
tubulin deacetylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043204 |
perikaryon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0042903 |
tubulin deacetylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030424 |
axon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008017 |
microtubule binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:1901300 |
positive regulation of hydrogen peroxide-mediated programmed cell death |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090042 |
tubulin deacetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3776868 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0090042 |
tubulin deacetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3776868 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0090042 |
tubulin deacetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090042 |
tubulin deacetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0090035 |
positive regulation of chaperone-mediated protein complex assembly |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0071218 |
cellular response to misfolded protein |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3776868 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0070848 |
response to growth factor |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0070846 |
Hsp90 deacetylation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3776868 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0070846 |
Hsp90 deacetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0070845 |
polyubiquitinated misfolded protein transport |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0070842 |
aggresome assembly |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:99919 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0070842 |
aggresome assembly |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0070840 |
dynein complex binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0070301 |
cellular response to hydrogen peroxide |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0070201 |
regulation of establishment of protein localization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0061734 |
parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060997 |
dendritic spine morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0010012) |
Seeded From UniProt |
complete | ||
enables |
GO:0051879 |
Hsp90 protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051788 |
response to misfolded protein |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0051787 |
misfolded protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0048668 |
collateral sprouting |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0010012) |
Seeded From UniProt |
complete | ||
enables |
GO:0048487 |
beta-tubulin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0048156 |
tau protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045861 |
negative regulation of proteolysis |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045598 |
regulation of fat cell differentiation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0044297 |
cell body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0010012) |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0043242 |
negative regulation of protein complex disassembly |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0043162 |
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3776868 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0043130 |
ubiquitin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0043014 |
alpha-tubulin binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0043005 |
neuron projection |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0010012) |
Seeded From UniProt |
complete | ||
enables |
GO:0042903 |
tubulin deacetylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042903 |
tubulin deacetylase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042826 |
histone deacetylase binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0040029 |
regulation of gene expression, epigenetic |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0035967 |
cellular response to topologically incorrect protein |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0034983 |
peptidyl-lysine deacetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0033558 |
protein deacetylase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0033138 |
positive regulation of peptidyl-serine phosphorylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000353 |
physical interaction evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0032984 |
protein-containing complex disassembly |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:96238 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0032461 |
positive regulation of protein oligomerization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0032418 |
lysosome localization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0031647 |
regulation of protein stability |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0031593 |
polyubiquitin modification-dependent protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0031252 |
cell leading edge |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030424 |
axon |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:619981 |
C |
Seeded From UniProt |
complete | ||
colocalizes_with |
GO:0030286 |
dynein complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0019213 |
deacetylase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:619981 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0016575 |
histone deacetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0016241 |
regulation of macroautophagy |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016235 |
aggresome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016234 |
inclusion body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010870 |
positive regulation of receptor biosynthetic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010634 |
positive regulation of epithelial cell migration |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010469 |
regulation of signaling receptor activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0010033 |
response to organic substance |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0009967 |
positive regulation of signal transduction |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0009636 |
response to toxic substance |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008017 |
microtubule binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008013 |
beta-catenin binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007026 |
negative regulation of microtubule depolymerization |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006886 |
intracellular protein transport |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006515 |
protein quality control for misfolded or incompletely synthesized proteins |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:99919 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0006511 |
ubiquitin-dependent protein catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:3776868 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0006476 |
protein deacetylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006476 |
protein deacetylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005901 |
caveola |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0005881 |
cytoplasmic microtubule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005875 |
microtubule associated complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005874 |
microtubule |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005813 |
centrosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:619981 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0000209 |
protein polyubiquitination |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0000118 |
histone deacetylase complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070932 |
histone H3 deacetylation |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0032041 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1901300 |
positive regulation of hydrogen peroxide-mediated programmed cell death |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090042 |
tubulin deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090035 |
positive regulation of chaperone-mediated protein complex assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070848 |
response to growth factor |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070846 |
Hsp90 deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070845 |
polyubiquitinated misfolded protein transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070842 |
aggresome assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0070840 |
dynein complex binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070301 |
cellular response to hydrogen peroxide |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061734 |
parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0051879 |
Hsp90 protein binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051788 |
response to misfolded protein |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0048156 |
tau protein binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045861 |
negative regulation of proteolysis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043242 |
negative regulation of protein complex disassembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0043014 |
alpha-tubulin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0042903 |
tubulin deacetylase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0042826 |
histone deacetylase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0040029 |
regulation of gene expression, epigenetic |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035967 |
cellular response to topologically incorrect protein |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034983 |
peptidyl-lysine deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0033558 |
protein deacetylase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033138 |
positive regulation of peptidyl-serine phosphorylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032461 |
positive regulation of protein oligomerization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032418 |
lysosome localization |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0031647 |
regulation of protein stability |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0031593 |
polyubiquitin modification-dependent protein binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0031252 |
cell leading edge |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0030286 |
dynein complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016575 |
histone deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016241 |
regulation of macroautophagy |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0016235 |
aggresome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016234 |
inclusion body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010870 |
positive regulation of receptor biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010634 |
positive regulation of epithelial cell migration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010469 |
regulation of signaling receptor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010033 |
response to organic substance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009967 |
positive regulation of signal transduction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0009636 |
response to toxic substance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008017 |
microtubule binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0008013 |
beta-catenin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006886 |
intracellular protein transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006515 |
protein quality control for misfolded or incompletely synthesized proteins |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006476 |
protein deacetylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005901 |
caveola |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005875 |
microtubule associated complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005874 |
microtubule |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000118 |
histone deacetylase complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9UBN7 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:A0A024QZ26 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004407 |
histone deacetylase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0032041 |
NAD-dependent histone deacetylase activity (H3-K14 specific) |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003779 |
actin binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043204 |
perikaryon |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030424 |
axon |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 Zhang, M et al. (2014) HDAC6 deacetylates and ubiquitinates MSH2 to maintain proper levels of MutSα. Mol. Cell 55 31-46 PubMed GONUTS page
- ↑ 2.0 2.1 Perez, M et al. (2009) Tau--an inhibitor of deacetylase HDAC6 function. J. Neurochem. 109 1756-66 PubMed GONUTS page
- ↑ Mahboubi, H et al. (2016) AMP Kinase Activation Alters Oxidant-Induced Stress Granule Assembly by Modulating Cell Signaling and Microtubule Organization. Mol. Pharmacol. 90 460-8 PubMed GONUTS page
- ↑ 4.0 4.1 Cook, C et al. (2014) Acetylation of the KXGS motifs in tau is a critical determinant in modulation of tau aggregation and clearance. Hum. Mol. Genet. 23 104-16 PubMed GONUTS page
- ↑ 5.0 5.1 Lee, JY et al. (2010) Disease-causing mutations in parkin impair mitochondrial ubiquitination, aggregation, and HDAC6-dependent mitophagy. J. Cell Biol. 189 671-9 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 6.3 6.4 Wickström, SA et al. (2010) CYLD negatively regulates cell-cycle progression by inactivating HDAC6 and increasing the levels of acetylated tubulin. EMBO J. 29 131-44 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 Southwood, CM et al. (2007) Microtubule deacetylases, SirT2 and HDAC6, in the nervous system. Neurochem. Res. 32 187-95 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 8.3 8.4 8.5 Boyault, C et al. (2007) HDAC6 controls major cell response pathways to cytotoxic accumulation of protein aggregates. Genes Dev. 21 2172-81 PubMed GONUTS page
- ↑ 9.0 9.1 9.2 9.3 9.4 Boyault, C et al. (2006) HDAC6-p97/VCP controlled polyubiquitin chain turnover. EMBO J. 25 3357-66 PubMed GONUTS page
- ↑ 10.0 10.1 10.2 10.3 Zhang, Y et al. (2003) HDAC-6 interacts with and deacetylates tubulin and microtubules in vivo. EMBO J. 22 1168-79 PubMed GONUTS page
- ↑ Fusco, C et al. (2012) The E3-ubiquitin ligase TRIM50 interacts with HDAC6 and p62, and promotes the sequestration and clearance of ubiquitinated proteins into the aggresome. PLoS ONE 7 e40440 PubMed GONUTS page
- ↑ 12.0 12.1 12.2 12.3 Ageta-Ishihara, N et al. (2013) Septins promote dendrite and axon development by negatively regulating microtubule stability via HDAC6-mediated deacetylation. Nat Commun 4 2532 PubMed GONUTS page
- ↑ Yang, W et al. (2013) Regulation of adipogenesis by cytoskeleton remodelling is facilitated by acetyltransferase MEC-17-dependent acetylation of α-tubulin. Biochem. J. 449 605-12 PubMed GONUTS page
- ↑ 14.0 14.1 14.2 Matsuyama, A et al. (2002) In vivo destabilization of dynamic microtubules by HDAC6-mediated deacetylation. EMBO J. 21 6820-31 PubMed GONUTS page
- ↑ 15.0 15.1 15.2 Seigneurin-Berny, D et al. (2001) Identification of components of the murine histone deacetylase 6 complex: link between acetylation and ubiquitination signaling pathways. Mol. Cell. Biol. 21 8035-44 PubMed GONUTS page
- ↑ Verdel, A & Khochbin, S (1999) Identification of a new family of higher eukaryotic histone deacetylases. Coordinate expression of differentiation-dependent chromatin modifiers. J. Biol. Chem. 274 2440-5 PubMed GONUTS page
a
c
- GO:0005901 ! caveola
- GO:0071218 ! cellular response to misfolded protein
- GO:0035967 ! cellular response to topologically incorrect protein
- GO:0070301 ! cellular response to hydrogen peroxide
- GO:0044297 ! cell body
- GO:0031252 ! cell leading edge
- GO:0042995 ! cell projection
- GO:0005813 ! centrosome
- Chordata
- GO:0006325 ! chromatin organization
- GO:0048668 ! collateral sprouting
- Craniata
- GO:0005737 ! cytoplasm
- GO:0005881 ! cytoplasmic microtubule
- GO:0005829 ! cytosol
d
e
g
h
m
n
o
- GO:0016575 ! obsolete histone deacetylation
- GO:0070932 ! obsolete histone H3 deacetylation
- GO:0098779 ! obsolete positive regulation of mitophagy in response to mitochondrial depolarization
- GO:0010870 ! obsolete positive regulation of receptor biosynthetic process
- GO:0010033 ! obsolete response to organic substance
p
- GO:0034983 ! peptidyl-lysine deacetylation
- GO:0043204 ! perikaryon
- GO:0048471 ! perinuclear region of cytoplasm
- GO:0106047 ! polyamine deacetylation
- GO:0070845 ! polyubiquitinated misfolded protein transport
- GO:0031593 ! polyubiquitin modification-dependent protein binding
- GO:0009967 ! positive regulation of signal transduction
- GO:0090035 ! positive regulation of chaperone-mediated protein complex assembly
- GO:0010634 ! positive regulation of epithelial cell migration
- GO:1901300 ! positive regulation of hydrogen peroxide-mediated programmed cell death
- GO:0033138 ! positive regulation of peptidyl-serine phosphorylation
- GO:0032461 ! positive regulation of protein oligomerization
- GO:0032984 ! protein-containing complex disassembly
- GO:0032991 ! protein-containing complex
- GO:0006476 ! protein deacetylation
- GO:0031648 ! protein destabilization
- GO:0033558 ! protein lysine deacetylase activity
- GO:0000209 ! protein polyubiquitination
- GO:0006515 ! protein quality control for misfolded or incompletely synthesized proteins
r
- GO:0031647 ! regulation of protein stability
- GO:0045598 ! regulation of fat cell differentiation
- GO:0010469 ! regulation of signaling receptor activity
- GO:0016241 ! regulation of macroautophagy
- GO:0070201 ! regulation of establishment of protein localization
- GO:0070848 ! response to growth factor
- GO:0009636 ! response to toxic substance
- GO:0051788 ! response to misfolded protein
- GO:0000978 ! RNA polymerase II cis-regulatory region sequence-specific DNA binding
- Rodentia
t
u