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MOUSE:FMR1
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Fmr1 (synonyms: Fmr-1) | |
Protein Name(s) | Fragile X mental retardation protein 1 homolog
FMRP Protein FMR-1 mFmr1p | |
External Links | ||
UniProt | P35922 | |
EMBL | L23971 | |
CCDS | CCDS30171.1 CCDS72385.1 | |
PIR | S36173 | |
UniGene | Mm.3451 | |
ProteinModelPortal | P35922 | |
SMR | P35922 | |
IntAct | P35922 | |
MINT | MINT-111096 | |
PhosphoSite | P35922 | |
MaxQB | P35922 | |
PaxDb | P35922 | |
PRIDE | P35922 | |
UCSC | uc009tiu.1 uc009tiv.1 uc009tiy.1 | |
MGI | MGI:95564 | |
eggNOG | NOG75351 | |
HOGENOM | HOG000293377 | |
HOVERGEN | HBG005739 | |
InParanoid | P35922 | |
PhylomeDB | P35922 | |
ChiTaRS | Fmr1 | |
PRO | PR:P35922 | |
Proteomes | UP000000589 | |
CleanEx | MM_FMR1 | |
Genevestigator | P35922 | |
GO | GO:0044297 GO:0010494 GO:0005845 GO:0071598 GO:0005730 GO:0005634 GO:0008017 GO:0003723 GO:0007417 GO:0051028 GO:0045947 | |
Gene3D | 3.30.1370.10 | |
InterPro | IPR008395 IPR022034 IPR004087 IPR004088 | |
Pfam | PF05641 PF12235 PF00013 | |
SMART | SM00322 | |
SUPFAM | SSF54791 | |
PROSITE | PS51641 PS50084 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0045727 |
positive regulation of translation |
ECO:0000315 |
P |
Fig. 6: Sod1 expression reduced in Fmr1-mutant cells |
complete | |||||
GO:0017148 |
negative regulation of translation |
ECO:0000315 |
P |
Figure 3 (c-g) shows that in mutant mice cells with no FMRP protein production, there was an increased expression of GABAbR1 and GABAbR2 proteins. This means that in the presence of FMRP, translation of GABAbR1 and GABAbR2 is repressed. This shows FMRP negatively regulates the expression of these proteins. |
complete | |||||
part_of |
GO:0005844 |
polysome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060998 |
regulation of dendritic spine development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051489 |
regulation of filopodium assembly |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0032433 |
filopodium tip |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030424 |
axon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045202 |
synapse |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:1990812 |
growth cone filopodium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1902416 |
positive regulation of mRNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003730 |
mRNA 3'-UTR binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0043488 |
regulation of mRNA stability |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007215 |
glutamate receptor signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:1902737 |
dendritic filopodium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1900453 |
negative regulation of long-term synaptic depression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007215 |
glutamate receptor signaling pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:1902737 |
dendritic filopodium |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043679 |
axon terminus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043204 |
perikaryon |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0035198 |
miRNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035197 |
siRNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0033592 |
RNA strand annealing activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000637 |
positive regulation of gene silencing by miRNA |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005844 |
polysome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010629 |
negative regulation of gene expression |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043204 |
perikaryon |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0098794 |
postsynapse |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0098908 |
regulation of neuronal action potential |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0032797 |
SMN complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0002092 |
positive regulation of receptor internalization |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0002151 |
G-quadruplex RNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1905244 |
regulation of modification of synaptic structure |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(CL:0000121) |
Seeded From UniProt |
complete | ||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007215 |
glutamate receptor signaling pathway |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035064 |
methylated histone binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0010369 |
chromocenter |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0033129 |
positive regulation of histone phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:2001022 |
positive regulation of response to DNA damage stimulus |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034644 |
cellular response to UV |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0072711 |
cellular response to hydroxyurea |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008089 |
anterograde axonal transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0034046 |
poly(G) binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008266 |
poly(U) RNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003729 |
mRNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0099578 |
regulation of translation at postsynapse, modulating synaptic transmission |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0097386 |
glial cell projection |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003730 |
mRNA 3'-UTR binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003729 |
mRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0017148 |
negative regulation of translation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005844 |
polysome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043204 |
perikaryon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:1902737 |
dendritic filopodium |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051028 |
mRNA transport |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0036464 |
cytoplasmic ribonucleoprotein granule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0071598 |
neuronal ribonucleoprotein granule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007215 |
glutamate receptor signaling pathway |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008017 |
microtubule binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0070840 |
dynein complex binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051491 |
positive regulation of filopodium assembly |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0060999 |
positive regulation of dendritic spine development |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0048027 |
mRNA 5'-UTR binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035613 |
RNA stem-loop binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045727 |
positive regulation of translation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003730 |
mRNA 3'-UTR binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000766 |
negative regulation of cytoplasmic translation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0030371 |
translation repressor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0098793 |
presynapse |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0098794 |
postsynapse |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030424 |
axon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043204 |
perikaryon |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000301 |
negative regulation of synaptic vesicle exocytosis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1901386 |
negative regulation of voltage-gated calcium channel activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046928 |
regulation of neurotransmitter secretion |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:1901800 |
positive regulation of proteasomal protein catabolic process |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0019897 |
extrinsic component of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:2000637 |
positive regulation of gene silencing by miRNA |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0035198 |
miRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:1990825 |
sequence-specific mRNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045727 |
positive regulation of translation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045947 |
negative regulation of translational initiation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005845 |
mRNA cap binding complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0099578 |
regulation of translation at postsynapse, modulating synaptic transmission |
ECO:0001225 |
knockout evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0099523 |
presynaptic cytosol |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0099523 |
presynaptic cytosol |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0099523 |
presynaptic cytosol |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
part_of:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
part_of:(UBERON:0002264) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098686 |
hippocampal mossy fiber to CA3 synapse |
ECO:0006003 |
electron microscopy evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0098685 |
Schaffer collateral - CA1 synapse |
ECO:0001225 |
knockout evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0045182 |
translation regulator activity |
ECO:0001225 |
knockout evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:2001022 |
positive regulation of response to DNA damage stimulus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1905244 |
regulation of modification of synaptic structure |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:1902737 |
dendritic filopodium |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0099578 |
regulation of translation at postsynapse, modulating synaptic transmission |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0098793 |
presynapse |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0071598 |
neuronal ribonucleoprotein granule |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0028734 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060998 |
regulation of dendritic spine development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051489 |
regulation of filopodium assembly |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048814 |
regulation of dendrite morphogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0028734 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045727 |
positive regulation of translation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0045182 |
translation regulator activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0028734 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0044326 |
dendritic spine neck |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001318101 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043488 |
regulation of mRNA stability |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104860 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0028734 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001318100 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0036464 |
cytoplasmic ribonucleoprotein granule |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0035770 |
ribonucleoprotein granule |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104860 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0030426 |
growth cone |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001318101 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0030424 |
axon |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104860 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0017148 |
negative regulation of translation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0028734 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000063980 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008089 |
anterograde axonal transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007417 |
central nervous system development |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005844 |
polysome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104860 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0028734 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104860 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003730 |
mRNA 3'-UTR binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:104860 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003729 |
mRNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001934 |
positive regulation of protein phosphorylation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001318101 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95564 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:2001022 |
positive regulation of response to DNA damage stimulus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:2000637 |
positive regulation of gene silencing by miRNA |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:2000301 |
negative regulation of synaptic vesicle exocytosis |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:1990825 |
sequence-specific mRNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:1990635 |
proximal dendrite |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:1990124 |
messenger ribonucleoprotein complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:1902737 |
dendritic filopodium |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:1902416 |
positive regulation of mRNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:1902373 |
negative regulation of mRNA catabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:1901386 |
negative regulation of voltage-gated calcium channel activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:1901254 |
positive regulation of intracellular transport of viral material |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0099577 |
regulation of translation at presynapse, modulating synaptic transmission |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0099524 |
postsynaptic cytosol |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098978 |
glutamatergic synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0098908 |
regulation of neuronal action potential |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0098685 |
Schaffer collateral - CA1 synapse |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0098586 |
cellular response to virus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0097444 |
spine apparatus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0097386 |
glial cell projection |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0071598 |
neuronal ribonucleoprotein granule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0071598 |
neuronal ribonucleoprotein granule |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060998 |
regulation of dendritic spine development |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0060996 |
dendritic spine development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
MGI:MGI:1339656 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0060964 |
regulation of gene silencing by miRNA |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0051489 |
regulation of filopodium assembly |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0048027 |
mRNA 5'-UTR binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0046928 |
regulation of neurotransmitter secretion |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0045727 |
positive regulation of translation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0045665 |
negative regulation of neuron differentiation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0045182 |
translation regulator activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
F |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0044830 |
modulation by host of viral RNA genome replication |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0044327 |
dendritic spine head |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0044326 |
dendritic spine neck |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0044325 |
ion channel binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0044297 |
cell body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043679 |
axon terminus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0043524 |
negative regulation of neuron apoptotic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043204 |
perikaryon |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043204 |
perikaryon |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043195 |
terminal bouton |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0043022 |
ribosome binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0043005 |
neuron projection |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043005 |
neuron projection |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0042995 |
cell projection |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0036464 |
cytoplasmic ribonucleoprotein granule |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0036464 |
cytoplasmic ribonucleoprotein granule |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0035770 |
ribonucleoprotein granule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0035613 |
RNA stem-loop binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035198 |
miRNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035197 |
siRNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0035064 |
methylated histone binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0034046 |
poly(G) binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0033592 |
RNA strand annealing activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0033129 |
positive regulation of histone phosphorylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0032797 |
SMN complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0031369 |
translation initiation factor binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0030425 |
dendrite |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0030424 |
axon |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0030371 |
translation repressor activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0019904 |
protein domain specific binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0019903 |
protein phosphatase binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0019901 |
protein kinase binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0019034 |
viral replication complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0015030 |
Cajal body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0014069 |
postsynaptic density |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0010955 |
negative regulation of protein processing |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0010629 |
negative regulation of gene expression |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0010628 |
positive regulation of gene expression |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0010494 |
cytoplasmic stress granule |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0010494 |
cytoplasmic stress granule |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0008266 |
poly(U) RNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008017 |
microtubule binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0007417 |
central nervous system development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
MGI:MGI:2451086 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0007215 |
glutamate receptor signaling pathway |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
colocalizes_with |
GO:0005874 |
microtubule |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005844 |
polysome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005844 |
polysome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005829 |
cytosol |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005791 |
rough endoplasmic reticulum |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005790 |
smooth endoplasmic reticulum |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003730 |
mRNA 3'-UTR binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003729 |
mRNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
enables |
GO:0003729 |
mRNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003729 |
mRNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003723 |
RNA binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
has_input:(MGI:MGI:2677850) |
Seeded From UniProt |
complete | ||
enables |
GO:0003723 |
RNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0002151 |
G-quadruplex RNA binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0002092 |
positive regulation of receptor internalization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0002091 |
negative regulation of receptor internalization |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0001934 |
positive regulation of protein phosphorylation |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:0000381 |
regulation of alternative mRNA splicing, via spliceosome |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0000340 |
RNA 7-methylguanosine cap binding |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2623 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:1904115 |
axon cytoplasm |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0008089 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:1904115 |
axon cytoplasm |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0008089 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003676 |
nucleic acid binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003729 |
mRNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006417 |
regulation of translation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0042995 |
cell projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007399 |
nervous system development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043005 |
neuron projection |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0000775 |
chromosome, centromeric region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006417 |
regulation of translation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0031047 |
gene silencing by RNA |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0045211 |
postsynaptic membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006397 |
mRNA processing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008380 |
RNA splicing |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051028 |
mRNA transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045202 |
synapse |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030175 |
filopodium |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0036464 |
cytoplasmic ribonucleoprotein granule |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0010494 |
cytoplasmic stress granule |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030426 |
growth cone |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0048471 |
perinuclear region of cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030425 |
dendrite |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043204 |
perikaryon |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005730 |
nucleolus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0032433 |
filopodium tip |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0042734 |
presynaptic membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043197 |
dendritic spine |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030424 |
axon |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Bechara, EG et al. (2009) A novel function for fragile X mental retardation protein in translational activation. PLoS Biol. 7 e16 PubMed GONUTS page
- ↑ Wolfe, SA et al. (2016) FMRP regulates an ethanol-dependent shift in GABABR function and expression with rapid antidepressant properties. Nat Commun 7 12867 PubMed GONUTS page
- ↑ Darnell, JC et al. (2005) Kissing complex RNAs mediate interaction between the Fragile-X mental retardation protein KH2 domain and brain polyribosomes. Genes Dev. 19 903-18 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.8 Antar, LN et al. () Local functions for FMRP in axon growth cone motility and activity-dependent regulation of filopodia and spine synapses. Mol. Cell. Neurosci. 32 37-48 PubMed GONUTS page
- ↑ 5.0 5.1 Zalfa, F et al. (2007) A new function for the fragile X mental retardation protein in regulation of PSD-95 mRNA stability. Nat. Neurosci. 10 578-87 PubMed GONUTS page
- ↑ 6.0 6.1 Nimchinsky, EA et al. (2001) Abnormal development of dendritic spines in FMR1 knock-out mice. J. Neurosci. 21 5139-46 PubMed GONUTS page
- ↑ Ascano, M Jr et al. (2012) FMRP targets distinct mRNA sequence elements to regulate protein expression. Nature 492 382-6 PubMed GONUTS page
- ↑ Ferrari, F et al. (2007) The fragile X mental retardation protein-RNP granules show an mGluR-dependent localization in the post-synaptic spines. Mol. Cell. Neurosci. 34 343-54 PubMed GONUTS page
- ↑ Piazzon, N et al. (2008) In vitro and in cellulo evidences for association of the survival of motor neuron complex with the fragile X mental retardation protein. J. Biol. Chem. 283 5598-610 PubMed GONUTS page
- ↑ Didiot, MC et al. (2008) The G-quartet containing FMRP binding site in FMR1 mRNA is a potent exonic splicing enhancer. Nucleic Acids Res. 36 4902-12 PubMed GONUTS page
- ↑ Koekkoek, SK et al. (2005) Deletion of FMR1 in Purkinje cells enhances parallel fiber LTD, enlarges spines, and attenuates cerebellar eyelid conditioning in Fragile X syndrome. Neuron 47 339-52 PubMed GONUTS page
- ↑ 12.0 12.1 Lai, D et al. (2006) The fragile X mental retardation protein interacts with a distinct mRNA nuclear export factor NXF2. RNA 12 1446-9 PubMed GONUTS page
- ↑ 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 Alpatov, R et al. (2014) A chromatin-dependent role of the fragile X mental retardation protein FMRP in the DNA damage response. Cell 157 869-81 PubMed GONUTS page
- ↑ Zhang, P et al. (2015) Novel RNA- and FMRP-binding protein TRF2-S regulates axonal mRNA transport and presynaptic plasticity. Nat Commun 6 8888 PubMed GONUTS page
- ↑ Park, S et al. (2008) Elongation factor 2 and fragile X mental retardation protein control the dynamic translation of Arc/Arg3.1 essential for mGluR-LTD. Neuron 59 70-83 PubMed GONUTS page
- ↑ 16.0 16.1 16.2 16.3 16.4 Wang, H et al. (2004) Developmentally-programmed FMRP expression in oligodendrocytes: a potential role of FMRP in regulating translation in oligodendroglia progenitors. Hum. Mol. Genet. 13 79-89 PubMed GONUTS page
- ↑ 17.00 17.01 17.02 17.03 17.04 17.05 17.06 17.07 17.08 17.09 17.10 Dictenberg, JB et al. (2008) A direct role for FMRP in activity-dependent dendritic mRNA transport links filopodial-spine morphogenesis to fragile X syndrome. Dev. Cell 14 926-39 PubMed GONUTS page
- ↑ 18.0 18.1 18.2 Li, Z et al. (2001) The fragile X mental retardation protein inhibits translation via interacting with mRNA. Nucleic Acids Res. 29 2276-83 PubMed GONUTS page
- ↑ 19.00 19.01 19.02 19.03 19.04 19.05 19.06 19.07 19.08 19.09 19.10 Christie, SB et al. (2009) The FXG: a presynaptic fragile X granule expressed in a subset of developing brain circuits. J. Neurosci. 29 1514-24 PubMed GONUTS page
- ↑ 20.0 20.1 20.2 Ferron, L et al. (2014) Fragile X mental retardation protein controls synaptic vesicle exocytosis by modulating N-type calcium channel density. Nat Commun 5 3628 PubMed GONUTS page
- ↑ 21.0 21.1 Edbauer, D et al. (2010) Regulation of synaptic structure and function by FMRP-associated microRNAs miR-125b and miR-132. Neuron 65 373-84 PubMed GONUTS page
- ↑ 22.0 22.1 Napoli, I et al. (2008) The fragile X syndrome protein represses activity-dependent translation through CYFIP1, a new 4E-BP. Cell 134 1042-54 PubMed GONUTS page
- ↑ 23.0 23.1 23.2 Huber, KM et al. (2002) Altered synaptic plasticity in a mouse model of fragile X mental retardation. Proc. Natl. Acad. Sci. U.S.A. 99 7746-50 PubMed GONUTS page
- ↑ 24.00 24.01 24.02 24.03 24.04 24.05 24.06 24.07 24.08 24.09 24.10 24.11 24.12 24.13 24.14 24.15 24.16 24.17 24.18 24.19 24.20 24.21 24.22 24.23 24.24 24.25 24.26 24.27 24.28 24.29 24.30 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 25.0 25.1 Kunde, SA et al. (2011) The X-chromosome-linked intellectual disability protein PQBP1 is a component of neuronal RNA granules and regulates the appearance of stress granules. Hum. Mol. Genet. 20 4916-31 PubMed GONUTS page
- ↑ 26.0 26.1 26.2 26.3 Davidovic, L et al. (2007) The fragile X mental retardation protein is a molecular adaptor between the neurospecific KIF3C kinesin and dendritic RNA granules. Hum. Mol. Genet. 16 3047-58 PubMed GONUTS page
- ↑ Dolan, BM et al. (2013) Rescue of fragile X syndrome phenotypes in Fmr1 KO mice by the small-molecule PAK inhibitor FRAX486. Proc. Natl. Acad. Sci. U.S.A. 110 5671-6 PubMed GONUTS page
- ↑ 28.0 28.1 Berg, JM et al. (2015) JAKMIP1, a Novel Regulator of Neuronal Translation, Modulates Synaptic Function and Autistic-like Behaviors in Mouse. Neuron 88 1173-1191 PubMed GONUTS page
- ↑ Cook, D et al. (2011) Fragile X related protein 1 clusters with ribosomes and messenger RNAs at a subset of dendritic spines in the mouse hippocampus. PLoS ONE 6 e26120 PubMed GONUTS page
- ↑ 30.0 30.1 Willemsen, R et al. (2003) The FMR1 CGG repeat mouse displays ubiquitin-positive intranuclear neuronal inclusions; implications for the cerebellar tremor/ataxia syndrome. Hum. Mol. Genet. 12 949-59 PubMed GONUTS page
- ↑ Derlig, K et al. (2013) Identification and characterisation of Simiate, a novel protein linked to the fragile X syndrome. PLoS ONE 8 e83007 PubMed GONUTS page
a
c
- GO:0015030 ! Cajal body
- GO:0034644 ! cellular response to UV
- GO:0072711 ! cellular response to hydroxyurea
- GO:0098586 ! cellular response to virus
- GO:0044297 ! cell body
- GO:0030054 ! cell junction
- GO:0042995 ! cell projection
- GO:0007417 ! central nervous system development
- GO:0007268 ! chemical synaptic transmission
- Chordata
- GO:0003682 ! chromatin binding
- GO:0010369 ! chromocenter
- GO:0005694 ! chromosome
- GO:0000775 ! chromosome, centromeric region
- Craniata
- GO:0005737 ! cytoplasm
- GO:0010494 ! cytoplasmic stress granule
- GO:0036464 ! cytoplasmic ribonucleoprotein granule
- GO:0005829 ! cytosol
d
e
g
m
- Mammalia
- GO:0016020 ! membrane
- Metazoa
- GO:0005874 ! microtubule
- GO:0008017 ! microtubule binding
- GO:0035198 ! miRNA binding
- GO:0044830 ! modulation by host of viral RNA genome replication
- GO:0003730 ! mRNA 3'-UTR binding
- GO:0048027 ! mRNA 5'-UTR binding
- GO:0003729 ! mRNA binding
- GO:0006397 ! mRNA processing
- GO:0051028 ! mRNA transport
- Muridae
- Murinae
- Muroidea
- Mus
- Mus musculus
n
- GO:0002091 ! negative regulation of receptor internalization
- GO:0045665 ! negative regulation of neuron differentiation
- GO:1902373 ! negative regulation of mRNA catabolic process
- GO:2000766 ! negative regulation of cytoplasmic translation
- GO:2000301 ! negative regulation of synaptic vesicle exocytosis
- GO:1901386 ! negative regulation of voltage-gated calcium channel activity
- GO:0010955 ! negative regulation of protein processing
- GO:0010629 ! negative regulation of gene expression
- GO:1900453 ! negative regulation of long-term synaptic depression
- GO:0045947 ! negative regulation of translational initiation
- GO:0017148 ! negative regulation of translation
- GO:0043524 ! negative regulation of neuron apoptotic process
- GO:0007399 ! nervous system development
- GO:0043025 ! neuronal cell body
- GO:0071598 ! neuronal ribonucleoprotein granule
- GO:0043005 ! neuron projection
- GO:0003676 ! nucleic acid binding
- GO:0005730 ! nucleolus
- GO:0005654 ! nucleoplasm
- GO:0005634 ! nucleus
o
- GO:1990124 ! obsolete messenger ribonucleoprotein complex
- GO:0035064 ! obsolete methylated histone binding
- GO:0005845 ! obsolete mRNA cap binding complex
- GO:0005844 ! obsolete polysome
- GO:0033129 ! obsolete positive regulation of histone phosphorylation
- GO:2001022 ! obsolete positive regulation of response to DNA damage stimulus
p
- GO:0043204 ! perikaryon
- GO:0048471 ! perinuclear region of cytoplasm
- GO:0005886 ! plasma membrane
- GO:0034046 ! poly(G) binding
- GO:0008266 ! poly(U) RNA binding
- GO:0002092 ! positive regulation of receptor internalization
- GO:0045727 ! positive regulation of translation
- GO:0010628 ! positive regulation of gene expression
- GO:1901254 ! positive regulation of intracellular transport of viral material
- GO:0001934 ! positive regulation of protein phosphorylation
- GO:2000637 ! positive regulation of miRNA-mediated gene silencing
- GO:0051491 ! positive regulation of filopodium assembly
- GO:0060999 ! positive regulation of dendritic spine development
- GO:1901800 ! positive regulation of proteasomal protein catabolic process
- GO:1902416 ! positive regulation of mRNA binding
- GO:0098794 ! postsynapse
- GO:0045211 ! postsynaptic membrane
- GO:0099524 ! postsynaptic cytosol
- GO:0014069 ! postsynaptic density
- GO:0098793 ! presynapse
- GO:0042734 ! presynaptic membrane
- GO:0099523 ! presynaptic cytosol
- GO:0019904 ! protein domain specific binding
- GO:0046982 ! protein heterodimerization activity
- GO:0042803 ! protein homodimerization activity
- GO:0019901 ! protein kinase binding
- GO:0019903 ! protein phosphatase binding
- GO:1990635 ! proximal dendrite
r
- GO:0098908 ! regulation of neuronal action potential
- GO:0099577 ! regulation of translation at presynapse, modulating synaptic transmission
- GO:0099578 ! regulation of translation at postsynapse, modulating synaptic transmission
- GO:0060964 ! regulation of miRNA-mediated gene silencing
- GO:0048814 ! regulation of dendrite morphogenesis
- GO:0006417 ! regulation of translation
- GO:0043488 ! regulation of mRNA stability
- GO:0000381 ! regulation of alternative mRNA splicing, via spliceosome
- GO:0046928 ! regulation of neurotransmitter secretion
- GO:0051489 ! regulation of filopodium assembly
- GO:1905244 ! regulation of modification of synaptic structure
- GO:0060998 ! regulation of dendritic spine development
- GO:0031047 ! regulatory ncRNA-mediated gene silencing
- GO:1990904 ! ribonucleoprotein complex
- GO:0035770 ! ribonucleoprotein granule
- GO:0043022 ! ribosome binding
- GO:0000340 ! RNA 7-methylguanosine cap binding
- GO:0003723 ! RNA binding
- GO:0008380 ! RNA splicing
- GO:0035613 ! RNA stem-loop binding
- GO:0033592 ! RNA strand annealing activity
- Rodentia
- GO:0005791 ! rough endoplasmic reticulum
s
t