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MOUSE:DCP2
Contents
Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
Gene Name(s) | Dcp2 | |
Protein Name(s) | m7GpppN-mRNA hydrolase
mRNA-decapping enzyme 2 | |
External Links | ||
UniProt | Q9CYC6 | |
EMBL | AK017809 AK166560 | |
CCDS | CCDS50275.1 | |
RefSeq | NP_081766.1 | |
UniGene | Mm.87629 | |
ProteinModelPortal | Q9CYC6 | |
SMR | Q9CYC6 | |
STRING | 10090.ENSMUSP00000025350 | |
iPTMnet | Q9CYC6 | |
PhosphoSite | Q9CYC6 | |
EPD | Q9CYC6 | |
MaxQB | Q9CYC6 | |
PaxDb | Q9CYC6 | |
PRIDE | Q9CYC6 | |
Ensembl | ENSMUST00000025350 | |
GeneID | 70640 | |
KEGG | mmu:70640 | |
UCSC | uc008eux.2 | |
CTD | 167227 | |
MGI | MGI:1917890 | |
eggNOG | KOG2937 COG0494 | |
GeneTree | ENSGT00390000018878 | |
HOGENOM | HOG000005974 | |
HOVERGEN | HBG051321 | |
InParanoid | Q9CYC6 | |
KO | K12613 | |
OMA | KKRTNGV | |
OrthoDB | EOG7XM2XP | |
TreeFam | TF314180 | |
BRENDA | 3.6.1.62 | |
Reactome | R-MMU-430039 R-MMU-450385 R-MMU-450604 | |
NextBio | 332021 | |
PRO | PR:Q9CYC6 | |
Proteomes | UP000000589 | |
Bgee | Q9CYC6 | |
CleanEx | MM_DCP2 | |
Genevisible | Q9CYC6 | |
GO | GO:0030054 GO:0000932 GO:0043231 GO:0005654 GO:0016442 GO:0050072 GO:0030145 GO:0003723 GO:0000290 GO:0071044 GO:0006402 GO:0000184 | |
Gene3D | 3.90.79.10 | |
InterPro | IPR007722 IPR020084 IPR000086 IPR015797 | |
Pfam | PF05026 PF00293 | |
SUPFAM | SSF55811 | |
PROSITE | PS51462 PS00893 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0071222 |
cellular response to lipopolysaccharide |
ECO:0000315 |
P |
In Fig.3E the up regulation of the non coding RNA after LPS exposure is diminished in the Dcp2 knockout in the bone marrow derived mouse macrophages |
complete | |||||
involved_in |
GO:0043488 |
regulation of mRNA stability |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006402 |
mRNA catabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071044 |
histone mRNA catabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0050072 |
m7G(5')pppN diphosphatase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006402 |
mRNA catabolic process |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0050072 |
m7G(5')pppN diphosphatase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0036534 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0036534 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000932 |
P-body |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0036534 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000290 |
deadenylation-dependent decapping of nuclear-transcribed mRNA |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0036534 |
P |
Seeded From UniProt |
complete | ||
acts_upstream_of_or_within |
GO:1904872 |
regulation of telomerase RNA localization to Cajal body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0071044 |
histone mRNA catabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0050072 |
m7G(5')pppN diphosphatase activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0043488 |
regulation of mRNA stability |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0036464 |
cytoplasmic ribonucleoprotein granule |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0032211 |
negative regulation of telomere maintenance via telomerase |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016442 |
RISC complex |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
acts_upstream_of_or_within |
GO:0006402 |
mRNA catabolic process |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004534 |
5'-3' exoribonuclease activity |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000932 |
P-body |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090503 |
RNA phosphodiester bond hydrolysis, exonucleolytic |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004534 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090503 |
RNA phosphodiester bond hydrolysis, exonucleolytic |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0004534 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1904872 |
regulation of telomerase RNA localization to Cajal body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071044 |
histone mRNA catabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0050072 |
m7G(5')pppN diphosphatase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043488 |
regulation of mRNA stability |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0036464 |
cytoplasmic ribonucleoprotein granule |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032211 |
negative regulation of telomere maintenance via telomerase |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0030054 |
cell junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0016442 |
RISC complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006402 |
mRNA catabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004534 |
5'-3' exoribonuclease activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000932 |
P-body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q8IU60 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003723 |
RNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000086 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0030145 |
manganese ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000184 |
nuclear-transcribed mRNA catabolic process, nonsense-mediated decay |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000932 |
P-body |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Castellanos-Rubio, A et al. (2016) A long noncoding RNA associated with susceptibility to celiac disease. Science 352 91-5 PubMed GONUTS page
- ↑ Song, MG et al. (2010) Multiple mRNA decapping enzymes in mammalian cells. Mol. Cell 40 423-32 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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