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MOUSE:CD5
Contents
| Species (Taxon ID) | Mus musculus (Mouse). (10090) | |
| Gene Name(s) | Cd5 (synonyms: Ly-1) | |
| Protein Name(s) | T-cell surface glycoprotein CD5
Lymphocyte antigen 1 Ly-1 Lyt-1 | |
| External Links | ||
| UniProt | P13379 | |
| EMBL | M15177 U09204 | |
| CCDS | CCDS29586.1 | |
| PIR | A29079 | |
| RefSeq | NP_031676.3 | |
| UniGene | Mm.779 | |
| ProteinModelPortal | P13379 | |
| SMR | P13379 | |
| PhosphoSite | P13379 | |
| PaxDb | P13379 | |
| PRIDE | P13379 | |
| Ensembl | ENSMUST00000025571 | |
| GeneID | 12507 | |
| KEGG | mmu:12507 | |
| UCSC | uc008gqv.1 | |
| CTD | 921 | |
| MGI | MGI:88340 | |
| eggNOG | NOG86650 | |
| HOGENOM | HOG000111490 | |
| HOVERGEN | HBG005286 | |
| InParanoid | P13379 | |
| KO | K06455 | |
| OMA | MSFHRNH | |
| OrthoDB | EOG7TF792 | |
| PhylomeDB | P13379 | |
| TreeFam | TF329295 | |
| NextBio | 281478 | |
| PRO | PR:P13379 | |
| Proteomes | UP000000589 | |
| Bgee | P13379 | |
| CleanEx | MM_CD5 | |
| ExpressionAtlas | P13379 | |
| Genevestigator | P13379 | |
| GO | GO:0009897 GO:0016021 GO:0005044 GO:0097190 GO:0031295 | |
| Gene3D | 3.10.250.10 | |
| InterPro | IPR001190 IPR017448 IPR003566 | |
| Pfam | PF00530 | |
| PRINTS | PR00258 PR01409 | |
| SMART | SM00202 | |
| SUPFAM | SSF56487 | |
| PROSITE | PS50287 | |
Annotations
| Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
|---|---|---|---|---|---|---|---|---|---|---|
|
involved_in |
GO:0031295 |
T cell costimulation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:88340 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002499882 |
C |
Seeded From UniProt |
complete | ||
|
acts_upstream_of_or_within |
GO:0097190 |
apoptotic signaling pathway |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0044214 |
spanning component of plasma membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
RGD:2309 |
C |
Seeded From UniProt |
complete | ||
|
acts_upstream_of_or_within |
GO:0031295 |
T cell costimulation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000084) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000084) |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000266 |
sequence orthology evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
|
involved_in |
GO:0016192 |
vesicle-mediated transport |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0005044 |
P |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P06127 |
C |
Seeded From UniProt |
complete | ||
|
enables |
GO:0005044 |
scavenger receptor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001190 |
C |
Seeded From UniProt |
complete | ||
|
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
|
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 2.0 2.1 Kishimoto, H & Sprent, J (1999) Several different cell surface molecules control negative selection of medullary thymocytes. J. Exp. Med. 190 65-73 PubMed GONUTS page
- ↑ Wiest, DL et al. (1997) A spontaneously arising mutation in the DLAARN motif of murine ZAP-70 abrogates kinase activity and arrests thymocyte development. Immunity 6 663-71 PubMed GONUTS page
- ↑ Bendelac, A et al. (1995) CD1 recognition by mouse NK1+ T lymphocytes. Science 268 863-5 PubMed GONUTS page
- ↑ Cheng, AM et al. (1995) Syk tyrosine kinase required for mouse viability and B-cell development. Nature 378 303-6 PubMed GONUTS page
- ↑ Davidson, WF et al. (1984) Dissociation of severe lupus-like disease from polyclonal B cell activation and IL 2 deficiency in C3H-lpr/lpr mice. J. Immunol. 133 1048-56 PubMed GONUTS page
- ↑ Lesourne, R et al. (2012) Interchangeability of Themis1 and Themis2 in thymocyte development reveals two related proteins with conserved molecular function. J. Immunol. 189 1154-61 PubMed GONUTS page
- ↑ Scaglione, BJ et al. (2007) Murine models of chronic lymphocytic leukaemia: role of microRNA-16 in the New Zealand Black mouse model. Br. J. Haematol. 139 645-57 PubMed GONUTS page
- ↑ Ling, KW et al. (2007) GATA3 controls the expression of CD5 and the T cell receptor during CD4 T cell lineage development. Eur. J. Immunol. 37 1043-52 PubMed GONUTS page
- ↑ Kretschmer, K et al. (2003) The selection of marginal zone B cells differs from that of B-1a cells. J. Immunol. 171 6495-501 PubMed GONUTS page
