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HUMAN:TBP

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Species (Taxon ID) Homo sapiens (Human). (9606)
Gene Name(s) TBP (synonyms: GTF2D1, TF2D, TFIID)
Protein Name(s) TATA-box-binding protein

TATA sequence-binding protein TATA-binding factor TATA-box factor Transcription initiation factor TFIID TBP subunit

External Links
UniProt P20226
EMBL X54993
M55654
M34960
AK304648
CR456776
AL031259
CCDS CCDS5315.1
CCDS55077.1
PIR A34830
RefSeq NP_001165556.1
NP_003185.1
UniGene Hs.590872
PDB 1C9B
1CDW
1JFI
1NVP
1TGH
PDBsum 1C9B
1CDW
1JFI
1NVP
1TGH
ProteinModelPortal P20226
SMR P20226
BioGrid 112771
DIP DIP-1078N
IntAct P20226
MINT MINT-156456
STRING 9606.ENSP00000230354
PhosphoSite P20226
DMDM 1351223
MaxQB P20226
PaxDb P20226
PRIDE P20226
DNASU 6908
Ensembl ENST00000230354
ENST00000392092
ENST00000540980
GeneID 6908
KEGG hsa:6908
UCSC uc003qxt.3
CTD 6908
GeneCards GC06P170863
GeneReviews TBP
HGNC HGNC:11588
HPA CAB009442
MIM 600075
607136
neXtProt NX_P20226
Orphanet 98759
PharmGKB PA36352
eggNOG COG2101
GeneTree ENSGT00410000025389
HOGENOM HOG000105164
HOVERGEN HBG044997
InParanoid P20226
KO K03120
OMA PLFSPMM
PhylomeDB P20226
TreeFam TF300102
Reactome REACT_1036
REACT_1074
REACT_1655
REACT_1851
REACT_1913
REACT_200827
REACT_200856
REACT_2089
REACT_2204
REACT_22107
REACT_22339
REACT_347
REACT_571
REACT_6233
REACT_6253
REACT_6332
REACT_834
REACT_953
SignaLink P20226
EvolutionaryTrace P20226
GeneWiki TATA-binding_protein
GenomeRNAi 6908
NextBio 27015
PRO PR:P20226
Proteomes UP000005640
Bgee P20226
CleanEx HS_TBP
ExpressionAtlas P20226
Genevestigator P20226
GO GO:0005737
GO:0001939
GO:0001940
GO:0005719
GO:0005654
GO:0005672
GO:0005669
GO:0070491
GO:0003700
GO:0008134
GO:0044212
GO:0010467
GO:0045893
GO:0007283
GO:0006363
GO:0006362
GO:0006368
GO:0006360
GO:0006366
GO:0006383
GO:0006361
GO:0006367
GO:0016032
Gene3D 1.25.10.10
3.30.310.10
HAMAP MF_00408
InterPro IPR011989
IPR012295
IPR000814
PANTHER PTHR10126
Pfam PF00352
PRINTS PR00686
PROSITE PS00351

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

GO_REF:0000113

ECO:0005556

multiple sequence alignment evidence used in manual assertion

UniProtKB:P29037

F

Seeded From UniProt

complete

enables

GO:0016251

RNA polymerase II general transcription initiation factor activity

PMID:27193682[1]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0000987

proximal promoter sequence-specific DNA binding

PMID:16263792[2]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

part_of

GO:0032991

protein-containing complex

PMID:15641800[3]

ECO:0000315

mutant phenotype evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0017162

aryl hydrocarbon receptor binding

PMID:15641800[3]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P35869

F

Seeded From UniProt

complete

enables

GO:0001093

TFIIB-class transcription factor binding

PMID:9841876[4]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q00403

F

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

PMID:27193682[1]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

PMID:27193682[1]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

PMID:27007846[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:27007846[5]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0000995

RNA polymerase III general transcription initiation factor activity

PMID:26638071[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006383

transcription by RNA polymerase III

PMID:26638071[6]

ECO:0000315

mutant phenotype evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0000790

nuclear chromatin

PMID:24289924[7]

ECO:0000314

direct assay evidence used in manual assertion

C

  • coincident_with:(ENSEMBL:ENSG00000124762)
  • coincident_with:(SO:0001668)
  • exists_during:(GO:0034644)

Seeded From UniProt

complete

part_of

GO:0097550

transcriptional preinitiation complex

PMID:9841876[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0001047

core promoter binding

PMID:9841876[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0019899

enzyme binding

PMID:25336585[8]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9UL18

F

Seeded From UniProt

complete

GO:0008134

transcription factor binding

PMID:22810624[9]

ECO:0000314

F

Figure 6B shows the interaction of TFIID with DNA molecules correlated with transcription.

complete
CACAO 6418

enables

GO:0019899

enzyme binding

PMID:25336585[8]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9UKV8

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:9841876[4]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0051123

RNA polymerase II preinitiation complex assembly

PMID:9841876[4]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

enables

GO:0016251

RNA polymerase II general transcription initiation factor activity

PMID:9841876[4]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0070491

repressing transcription factor binding

PMID:18838386[10]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q9ULM3

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:8626665[11]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P52657

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:7724559[12]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P52655

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:7724559[12]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P52657

F

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

PMID:7724559[12]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005719

nuclear euchromatin

PMID:19861239[13]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005672

transcription factor TFIIA complex

PMID:7724559[12]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:7933101[14]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:16540471[15]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:11005381[16]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q00613

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:12676957[17]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:P05412

F

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:9722567[18]

ECO:0000353

physical interaction evidence used in manual assertion

UniProtKB:Q12947

F

Seeded From UniProt

complete

involved_in

GO:0006367

transcription initiation from RNA polymerase II promoter

PMID:7729427[19]

ECO:0000305

curator inference used in manual assertion

GO:0005669

P

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

PMID:7729427[19]

ECO:0000305

curator inference used in manual assertion

GO:0005669

P

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

PMID:7729427[19]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0070898

RNA polymerase III preinitiation complex assembly

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000013138
SGD:S000000950

P

Seeded From UniProt

complete

enables

GO:0008134

transcription factor binding

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
FB:FBgn0010287
PANTHER:PTN000013136
UniProtKB:P20226
WB:WBGene00006542

F

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
FB:FBgn0261793
MGI:MGI:101838
PANTHER:PTN000013136
UniProtKB:P20226
UniProtKB:P52653
UniProtKB:Q8I440
ZFIN:ZDB-GENE-030616-563
ZFIN:ZDB-GENE-040520-2

P

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
PANTHER:PTN000013137
PomBase:SPAC29E6.08
RGD:67398
SGD:S000000950
UniProtKB:P20226
UniProtKB:Q8I440

C

Seeded From UniProt

complete

part_of

GO:0005667

transcription factor complex

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

CGD:CAL0000189736
FB:FBgn0010287
FB:FBgn0261793
PANTHER:PTN000013136

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0261793
MGI:MGI:2684058
PANTHER:PTN000013136
RGD:67398
WB:WBGene00006542

F

Seeded From UniProt

complete

enables

GO:0001016

RNA polymerase III regulatory region DNA binding

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000013138
SGD:S000000950

F

Seeded From UniProt

complete

enables

GO:0000979

RNA polymerase II core promoter sequence-specific DNA binding

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0261793
PANTHER:PTN000013136
PomBase:SPAC29E6.08
SGD:S000000950

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
FB:FBgn0010287
MGI:MGI:101838
PANTHER:PTN000013136
UniProtKB:P62380

F

Seeded From UniProt

complete

part_of

GO:0000126

transcription factor TFIIIB complex

PMID:21873635[20]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0003687
PANTHER:PTN000013138
SGD:S000000950
dictyBase:DDB_G0275617

C

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

PMID:9027316[21]

ECO:0000314

direct assay evidence used in manual assertion

F

Seeded From UniProt

complete

involved_in

GO:0006383

transcription by RNA polymerase III

PMID:9027316[21]

ECO:0000314

direct assay evidence used in manual assertion

P

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

PMID:14580349[22]

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000052

ECO:0000314

direct assay evidence used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:0006357

regulation of transcription by RNA polymerase II

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0000981

P

Seeded From UniProt

complete

part_of

GO:0045120

pronucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

C

Seeded From UniProt

complete

involved_in

GO:0006383

transcription by RNA polymerase III

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

P

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

P

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

F

Seeded From UniProt

complete

part_of

GO:0001940

male pronucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

C

Seeded From UniProt

complete

part_of

GO:0001939

female pronucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

C

Seeded From UniProt

complete

enables

GO:0001103

RNA polymerase II repressing transcription factor binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P29037
ensembl:ENSMUSP00000124317

F

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q66HB1
ensembl:ENSRNOP00000002038

P

Seeded From UniProt

complete

involved_in

GO:0007283

spermatogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q66HB1
ensembl:ENSRNOP00000002038

P

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q66HB1
ensembl:ENSRNOP00000002038

C

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q66HB1
ensembl:ENSRNOP00000002038

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q66HB1
ensembl:ENSRNOP00000002038

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q66HB1
ensembl:ENSRNOP00000002038

F

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000814
InterPro:IPR033710

F

Seeded From UniProt

complete

involved_in

GO:0006352

DNA-templated transcription, initiation

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000814
InterPro:IPR033710

P

Seeded From UniProt

complete

involved_in

GO:0006367

transcription initiation from RNA polymerase II promoter

PMID:2363050[23]
Reactome:R-HSA-75953
Reactome:R-HSA-73779

ECO:0000304

author statement supported by traceable reference used in manual assertion



P

Seeded From UniProt

complete

involved_in

GO:0006366

transcription by RNA polymerase II

PMID:2363050[23]
PMID:2194289[24]
Reactome:R-HSA-73857

ECO:0000304

author statement supported by traceable reference used in manual assertion



P

Seeded From UniProt

complete

part_of

GO:0005669

transcription factor TFIID complex

PMID:2363050[23]

ECO:0000304

author statement supported by traceable reference used in manual assertion

C

Seeded From UniProt

complete

involved_in

GO:1901796

regulation of signal transduction by p53 class mediator

Reactome:R-HSA-5633007

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0045815

positive regulation of gene expression, epigenetic

Reactome:R-HSA-5250924

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0042795

snRNA transcription by RNA polymerase II

Reactome:R-HSA-6807505

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006363

termination of RNA polymerase I transcription

Reactome:R-HSA-73863

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006362

transcription elongation from RNA polymerase I promoter

Reactome:R-HSA-73777

ECO:0000304

author statement supported by traceable reference used in manual assertion

P

Seeded From UniProt

complete

involved_in

GO:0006361

transcription initiation from RNA polymerase I promoter

Reactome:R-HSA-73772
Reactome:R-HSA-73762

ECO:0000304

author statement supported by traceable reference used in manual assertion


P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

Reactome:R-HSA-9613497
Reactome:R-HSA-9613494
Reactome:R-HSA-9023861
Reactome:R-HSA-9023860
Reactome:R-HSA-9009533
Reactome:R-HSA-9009526
Reactome:R-HSA-83805
Reactome:R-HSA-83803
Reactome:R-HSA-83793
Reactome:R-HSA-83790
Reactome:R-HSA-83723
Reactome:R-HSA-76056
Reactome:R-HSA-75949
Reactome:R-HSA-75873
Reactome:R-HSA-75869
Reactome:R-HSA-75866
Reactome:R-HSA-75864
Reactome:R-HSA-75862
Reactome:R-HSA-75861
Reactome:R-HSA-75856
Reactome:R-HSA-75850
Reactome:R-HSA-75095
Reactome:R-HSA-74994
Reactome:R-HSA-74993
Reactome:R-HSA-74992
Reactome:R-HSA-74986
Reactome:R-HSA-73946
Reactome:R-HSA-73769
Reactome:R-HSA-73758
Reactome:R-HSA-73739
Reactome:R-HSA-73729
Reactome:R-HSA-6814885
Reactome:R-HSA-6814559
Reactome:R-HSA-6814555
Reactome:R-HSA-6814549
Reactome:R-HSA-6810238
Reactome:R-HSA-6810235
Reactome:R-HSA-6810234
Reactome:R-HSA-6810233
Reactome:R-HSA-6805399
Reactome:R-HSA-5250947
Reactome:R-HSA-5250938
Reactome:R-HSA-5250930
Reactome:R-HSA-109639
Reactome:R-HSA-109638
Reactome:R-HSA-109637
Reactome:R-HSA-109636

ECO:0000304

author statement supported by traceable reference used in manual assertion















































C

Seeded From UniProt

complete

involved_in

GO:0016032

viral process

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0945

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0238

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 He, Y et al. (2016) Near-atomic resolution visualization of human transcription promoter opening. Nature 533 359-65 PubMed GONUTS page
  2. Zhao, Q et al. (2006) Repression of human gamma-globin gene expression by a short isoform of the NF-E4 protein is associated with loss of NF-E2 and RNA polymerase II recruitment to the promoter. Blood 107 2138-45 PubMed GONUTS page
  3. 3.0 3.1 Watt, K et al. (2005) Induced alpha-helix structure in the aryl hydrocarbon receptor transactivation domain modulates protein-protein interactions. Biochemistry 44 734-43 PubMed GONUTS page
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