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HUMAN:MMP2
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | MMP2 (synonyms: CLG4A) | |
Protein Name(s) | 72 kDa type IV collagenase
72 kDa gelatinase Gelatinase A Matrix metalloproteinase-2 MMP-2 TBE-1 PEX | |
External Links | ||
UniProt | P08253 | |
EMBL | M55593 M58552 M55582 M55583 M55584 M55585 M55586 M55587 M55588 M55589 M55590 M55591 M55592 AK301536 AK310314 AK312711 AY738117 AC007336 AC092722 BC002576 M33789 J03210 | |
CCDS | CCDS10752.1 CCDS45487.1 | |
PIR | A28153 | |
RefSeq | NP_001121363.1 NP_001289437.1 NP_001289438.1 NP_001289439.1 NP_004521.1 | |
UniGene | Hs.513617 | |
PDB | 1CK7 1CXW 1EAK 1GEN 1GXD 1HOV 1J7M 1KS0 1QIB 1RTG 3AYU | |
PDBsum | 1CK7 1CXW 1EAK 1GEN 1GXD 1HOV 1J7M 1KS0 1QIB 1RTG 3AYU | |
ProteinModelPortal | P08253 | |
SMR | P08253 | |
BioGrid | 110457 | |
DIP | DIP-26N | |
IntAct | P08253 | |
STRING | 9606.ENSP00000219070 | |
BindingDB | P08253 | |
ChEMBL | CHEMBL2095216 | |
DrugBank | DB01197 DB00786 | |
GuidetoPHARMACOLOGY | 1629 | |
MEROPS | M10.003 | |
PhosphoSite | P08253 | |
DMDM | 116856 | |
MaxQB | P08253 | |
PaxDb | P08253 | |
PeptideAtlas | P08253 | |
PRIDE | P08253 | |
DNASU | 4313 | |
Ensembl | ENST00000219070 ENST00000437642 ENST00000543485 ENST00000570308 | |
GeneID | 4313 | |
KEGG | hsa:4313 | |
UCSC | uc002ehz.4 | |
CTD | 4313 | |
GeneCards | GC16P055424 | |
HGNC | HGNC:7166 | |
HPA | CAB002788 HPA001939 | |
MIM | 120360 259600 | |
neXtProt | NX_P08253 | |
Orphanet | 85196 3460 | |
PharmGKB | PA30877 | |
eggNOG | NOG303159 | |
GeneTree | ENSGT00760000119132 | |
HOGENOM | HOG000217926 | |
HOVERGEN | HBG052484 | |
InParanoid | P08253 | |
KO | K01398 | |
OMA | PCKFPFR | |
OrthoDB | EOG70KGNX | |
PhylomeDB | P08253 | |
TreeFam | TF315428 | |
BioCyc | MetaCyc:HS01565-MONOMER | |
BRENDA | 3.4.24.24 | |
Reactome | REACT_118572 REACT_118682 REACT_150401 REACT_15428 REACT_228189 | |
ChiTaRS | MMP2 | |
EvolutionaryTrace | P08253 | |
GeneWiki | MMP2 | |
GenomeRNAi | 4313 | |
NextBio | 16973 | |
PMAP-CutDB | P08253 | |
PRO | PR:P08253 | |
Proteomes | UP000005640 | |
Bgee | P08253 | |
CleanEx | HS_MMP2 | |
ExpressionAtlas | P08253 | |
Genevestigator | P08253 | |
GO | GO:0005576 GO:0005615 GO:0005739 GO:0005634 GO:0005886 GO:0005578 GO:0030017 GO:0004222 GO:0004252 GO:0008270 GO:0001525 GO:0001955 GO:0060346 GO:0044267 GO:0071230 GO:0030574 GO:0007566 GO:0035987 GO:0022617 GO:0030198 GO:0060325 GO:0001957 GO:0045089 GO:0006508 GO:0001666 | |
Gene3D | 1.10.101.10 2.10.10.10 2.110.10.10 3.40.390.10 | |
InterPro | IPR028708 IPR000562 IPR000585 IPR018487 IPR018486 IPR013806 IPR024079 IPR001818 IPR021190 IPR021158 IPR006026 IPR002477 | |
PANTHER | PTHR10201:SF29 | |
Pfam | PF00040 PF00045 PF00413 PF01471 | |
PRINTS | PR00138 | |
SMART | SM00059 SM00120 SM00235 | |
SUPFAM | SSF47090 SSF50923 SSF57440 | |
PROSITE | PS00546 PS00023 PS51092 PS00024 PS51642 PS00142 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0010467 |
gene expression |
ECO:0000314 |
P |
Figure 4. Levels of change in MMP2 expression by quantitative RT-PCR. |
complete | |||||
colocalizes_with |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(CL:0002540) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1904645 |
response to amyloid-beta |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005615 |
extracellular space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0062023 |
collagen-containing extracellular matrix |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(CL:0002543) |
Seeded From UniProt |
complete | ||
involved_in |
GO:1904707 |
positive regulation of vascular smooth muscle cell proliferation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(UBERON:0002012) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005615 |
extracellular space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000235) |
Seeded From UniProt |
complete | ||
enables |
GO:0008237 |
metallopeptidase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0035987 |
endodermal cell differentiation |
ECO:0000270 |
expression pattern evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005615 |
extracellular space |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0001496) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048771 |
tissue remodeling |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002565602 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030574 |
collagen catabolic process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:101900 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030198 |
extracellular matrix organization |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0033438 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005615 |
extracellular space |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97005 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004222 |
metalloendopeptidase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0033438 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:97009 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004252 |
serine-type endopeptidase activity |
ECO:0000269 |
experimental evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005615 |
extracellular space |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:1904645 |
response to amyloid-beta |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071230 |
cellular response to amino acid stimulus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060346 |
bone trabecula formation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060325 |
face morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048705 |
skeletal system morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048661 |
positive regulation of smooth muscle cell proliferation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034614 |
cellular response to reactive oxygen species |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030574 |
collagen catabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0030017 |
sarcomere |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007566 |
embryo implantation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0004222 |
metalloendopeptidase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001957 |
intramembranous ossification |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001955 |
blood vessel maturation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001666 |
response to hypoxia |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P33434 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004222 |
metalloendopeptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001818 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001818 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0008237 |
metallopeptidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0008270 |
zinc ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR001818 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0031012 |
extracellular matrix |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0022617 |
extracellular matrix disassembly |
PMID:24970228[13] |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
P |
Seeded From UniProt |
complete | |
enables |
GO:0008270 |
zinc ion binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005615 |
extracellular space |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004222 |
metalloendopeptidase activity |
PMID:2834383[14] |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
F |
Seeded From UniProt |
complete | |
involved_in |
GO:0048013 |
ephrin receptor signaling pathway |
Reactome:R-HSA-2682334 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0044267 |
cellular protein metabolic process |
Reactome:R-HSA-392499 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030574 |
collagen catabolic process |
Reactome:R-HSA-1442490 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019221 |
cytokine-mediated signaling pathway |
Reactome:R-HSA-6785807 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005576 |
extracellular region |
Reactome:R-NUL-3814821 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
enables |
GO:0004252 |
serine-type endopeptidase activity |
Reactome:R-HSA-1604368 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
F |
Seeded From UniProt |
complete | |
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030574 |
collagen catabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008237 |
metallopeptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006508 |
proteolysis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005576 |
extracellular region |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005739 |
mitochondrion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0008233 |
peptidase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Patel, P et al. (2014) The expression of HIV-1 Vpu in monocytes causes increased secretion of TGF-β that activates profibrogenic genes in hepatic stellate cells. PLoS ONE 9 e88934 PubMed GONUTS page
- ↑ Ragelle, H et al. (2017) Comprehensive proteomic characterization of stem cell-derived extracellular matrices. Biomaterials 128 147-159 PubMed GONUTS page
- ↑ Marchant, DJ et al. (2014) A new transcriptional role for matrix metalloproteinase-12 in antiviral immunity. Nat. Med. 20 493-502 PubMed GONUTS page
- ↑ Zanivan, S et al. (2013) SILAC-based proteomics of human primary endothelial cell morphogenesis unveils tumor angiogenic markers. Mol. Cell Proteomics 12 3599-611 PubMed GONUTS page
- ↑ El-Bizri, N et al. (2008) SM22alpha-targeted deletion of bone morphogenetic protein receptor 1A in mice impairs cardiac and vascular development, and influences organogenesis. Development 135 2981-91 PubMed GONUTS page
- ↑ 6.0 6.1 De Clercq, S et al. (2013) L-plastin nanobodies perturb matrix degradation, podosome formation, stability and lifetime in THP-1 macrophages. PLoS ONE 8 e78108 PubMed GONUTS page
- ↑ Sung, JY et al. (2005) Proteolytic cleavage of extracellular secreted {alpha}-synuclein via matrix metalloproteinases. J. Biol. Chem. 280 25216-24 PubMed GONUTS page
- ↑ Brafman, DA et al. (2013) Regulation of endodermal differentiation of human embryonic stem cells through integrin-ECM interactions. Cell Death Differ. 20 369-81 PubMed GONUTS page
- ↑ Didangelos, A et al. (2010) Proteomics characterization of extracellular space components in the human aorta. Mol. Cell Proteomics 9 2048-62 PubMed GONUTS page
- ↑ 10.0 10.1 10.2 10.3 10.4 10.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ Litterst, C et al. (2007) Ligand binding and calcium influx induce distinct ectodomain/gamma-secretase-processing pathways of EphB2 receptor. J. Biol. Chem. 282 16155-63 PubMed GONUTS page
- ↑ Wu, Y & Smas, CM (2008) Wdnm1-like, a new adipokine with a role in MMP-2 activation. Am. J. Physiol. Endocrinol. Metab. 295 E205-15 PubMed GONUTS page
- ↑ Kojima, A et al. (2014) Prion fragment peptides are digested with membrane type matrix metalloproteinases and acquire enzyme resistance through Cu²⁺-binding. Biomolecules 4 510-26 PubMed GONUTS page
- ↑ 14.0 14.1 14.2 14.3 Collier, IE et al. (1988) H-ras oncogene-transformed human bronchial epithelial cells (TBE-1) secrete a single metalloprotease capable of degrading basement membrane collagen. J. Biol. Chem. 263 6579-87 PubMed GONUTS page
c
- Catarrhini
- GO:0044267 ! cellular protein metabolic process
- GO:0071230 ! cellular response to amino acid stimulus
- GO:0034614 ! cellular response to reactive oxygen species
- Chordata
- GO:0062023 ! collagen-containing extracellular matrix
- GO:0030574 ! collagen catabolic process
- Craniata
- GO:0019221 ! cytokine-mediated signaling pathway
- GO:0005737 ! cytoplasm
e
- GO:0007566 ! embryo implantation
- GO:0035987 ! endodermal cell differentiation
- GO:0048013 ! ephrin receptor signaling pathway
- Euarchontoglires
- Eukaryota
- Euteleostomi
- Eutheria
- GO:0030198 ! extracellular matrix organization
- GO:0005576 ! extracellular region
- GO:0005615 ! extracellular space
- GO:0022617 ! extracellular matrix disassembly
- GO:0031012 ! extracellular matrix
m
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