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HUMAN:LDLR
Contents
Species (Taxon ID) | Homo sapiens (Human). (9606) | |
Gene Name(s) | LDLR | |
Protein Name(s) | Low-density lipoprotein receptor
LDL receptor | |
External Links | ||
UniProt | P01130 | |
EMBL | L00352 L00336 L00337 L00338 L00339 L00340 L00341 L00343 L00344 L00345 L00346 L00347 L00348 L00349 L00350 L00351 L29401 AY114155 AK295612 AK296312 AK299038 AK300313 BT007361 AY324609 AB209409 FJ525879 AC011485 CH471106 BC014514 | |
CCDS | CCDS12254.1 CCDS56083.1 CCDS56084.1 CCDS56085.1 CCDS58651.1 | |
PIR | A01383 | |
RefSeq | NP_000518.1 NP_001182727.1 NP_001182728.1 NP_001182729.1 NP_001182732.1 | |
UniGene | Hs.213289 Hs.713981 | |
PDB | 1AJJ 1D2J 1F5Y 1F8Z 1HJ7 1HZ8 1I0U 1IJQ 1LDL 1LDR 1LRX 1N7D 1XFE 2FCW 2KRI 2LGP 2M7P 2MG9 2W2M 2W2N 2W2O 2W2P 2W2Q 3BPS 3GCW 3GCX 3M0C 3P5B 3P5C 3SO6 4NE9 | |
PDBsum | 1AJJ 1D2J 1F5Y 1F8Z 1HJ7 1HZ8 1I0U 1IJQ 1LDL 1LDR 1LRX 1N7D 1XFE 2FCW 2KRI 2LGP 2M7P 2MG9 2W2M 2W2N 2W2O 2W2P 2W2Q 3BPS 3GCW 3GCX 3M0C 3P5B 3P5C 3SO6 4NE9 | |
ProteinModelPortal | P01130 | |
SMR | P01130 | |
BioGrid | 110141 | |
DIP | DIP-29695N | |
IntAct | P01130 | |
MINT | MINT-3003796 | |
STRING | 9606.ENSP00000454071 | |
BindingDB | P01130 | |
ChEMBL | CHEMBL3311 | |
DrugBank | DB00707 | |
PhosphoSite | P01130 | |
UniCarbKB | P01130 | |
BioMuta | LDLR | |
DMDM | 126073 | |
MaxQB | P01130 | |
PaxDb | P01130 | |
PRIDE | P01130 | |
DNASU | 3949 | |
Ensembl | ENST00000455727 ENST00000535915 ENST00000545707 ENST00000558013 ENST00000558518 | |
GeneID | 3949 | |
KEGG | hsa:3949 | |
UCSC | uc002mqk.4 uc010xll.2 uc010xln.2 uc010xlo.2 | |
CTD | 3949 | |
GeneCards | GC19P011200 | |
GeneReviews | LDLR | |
HGNC | HGNC:6547 | |
HPA | HPA009647 HPA013159 | |
MIM | 143890 606945 | |
neXtProt | NX_P01130 | |
Orphanet | 406 391665 | |
PharmGKB | PA227 | |
eggNOG | NOG255913 | |
GeneTree | ENSGT00760000118968 | |
HOGENOM | HOG000115656 | |
HOVERGEN | HBG006250 | |
InParanoid | P01130 | |
KO | K12473 | |
OrthoDB | EOG7NGQ9P | |
PhylomeDB | P01130 | |
TreeFam | TF351700 | |
Reactome | REACT_24968 REACT_6841 REACT_6934 | |
ChiTaRS | LDLR | |
EvolutionaryTrace | P01130 | |
GeneWiki | LDL_receptor | |
GenomeRNAi | 3949 | |
NextBio | 15493 | |
PRO | PR:P01130 | |
Proteomes | UP000005640 | |
Bgee | P01130 | |
CleanEx | HS_LDLR | |
ExpressionAtlas | P01130 | |
Genevisible | P01130 | |
GO | GO:0045177 GO:0016323 GO:0009986 GO:0030669 GO:0005905 GO:0005769 GO:0010008 GO:0009897 GO:0005794 GO:0005887 GO:0005770 GO:0034362 GO:0005764 GO:0016020 GO:1990666 GO:0005886 GO:0043235 GO:0005509 GO:0032050 GO:0001948 GO:0030169 GO:0005041 GO:0030229 GO:0042632 GO:0070508 GO:0008203 GO:0030301 GO:0006897 GO:0030299 GO:0006629 GO:0042159 GO:0042157 GO:0034383 GO:0015914 GO:0007603 GO:0010867 GO:0006898 GO:2000188 GO:0010899 GO:0001523 GO:0044281 GO:0016032 | |
Gene3D | 2.120.10.30 4.10.400.10 | |
InterPro | IPR011042 IPR026823 IPR000742 IPR001881 IPR013032 IPR000152 IPR018097 IPR009030 IPR023415 IPR000033 IPR002172 | |
Pfam | PF12662 PF00057 PF00058 | |
PRINTS | PR00261 | |
SMART | SM00181 SM00179 SM00192 SM00135 | |
SUPFAM | SSF57184 SSF57424 | |
PROSITE | PS00010 PS01186 PS50026 PS01187 PS01209 PS50068 PS51120 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0005887 |
integral to plasma membrane |
ECO:0000304 |
C |
Source: ProtInc |
Missing: reference | |||||
GO:0005041 |
low-density lipoprotein receptor activity |
ECO:0000304 |
F |
Source: ProtInc |
Missing: reference | |||||
GO:0030299 |
cholesterol absorption |
ECO:0000315 |
P |
Source: HGNC |
Missing: reference | |||||
GO:0030301 |
cholesterol transport |
ECO:0000315 |
P |
Source: HGNC |
Missing: reference | |||||
GO:0006897 |
endocytosis |
ECO:0000304 |
P |
Source: ProtInc |
Missing: reference | |||||
GO:0006493 |
protein amino acid O-linked glycosylation |
ECO:0000304 |
P |
Source: ProtInc |
Missing: reference | |||||
involved_in |
GO:0006909 |
phagocytosis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0001540 |
amyloid-beta binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071404 |
cellular response to low-density lipoprotein particle stimulus |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090118 |
receptor-mediated endocytosis involved in cholesterol transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0034383 |
low-density lipoprotein particle clearance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0005041 |
low-density lipoprotein particle receptor activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0070508 |
cholesterol import |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
part_of:(GO:0042632) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0030169 |
low-density lipoprotein particle binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005905 |
clathrin-coated pit |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0051248 |
negative regulation of protein metabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0150094 |
amyloid-beta clearance by cellular catabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0006898 |
receptor-mediated endocytosis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0034381 |
plasma lipoprotein particle clearance |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
occurs_in:(CL:0000127) |
Seeded From UniProt |
complete | ||
GO:0010628 |
positive regulation of gene expression |
ECO:0000314 |
P |
Figure 1 shows stimulation to nicotine in OSCC induces LDLR expression. |
complete | |||||
involved_in |
GO:1905167 |
positive regulation of lysosomal protein catabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0051246 |
regulation of protein metabolic process |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0061889 |
negative regulation of astrocyte activation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
occurs_in:(UBERON:0000956) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005623 |
cell |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:1905907 |
negative regulation of amyloid fibril formation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:1903979 |
negative regulation of microglial cell activation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
regulates_o_occurs_in:(UBERON:0000956)|regulates_o_occurs_in:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0097242 |
amyloid-beta clearance |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0006898 |
receptor-mediated endocytosis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0061771 |
response to caloric restriction |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0007616 |
long-term memory |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:1990666 |
PCSK9-LDLR complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0002020 |
protease binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
UniProtKB:Q8NBP7:PRO_0000027121 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0002020 |
protease binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
UniProtKB:Q8NBP7:PRO_0000027120 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0005041 |
low-density lipoprotein particle receptor activity |
ECO:0000305 |
curator inference used in manual assertion |
GO:1990666 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0009986 |
cell surface |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
part_of:(UBERON:0001235) |
Seeded From UniProt |
complete | ||
part_of |
GO:1990666 |
PCSK9-LDLR complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045177 |
apical part of cell |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0016323 |
basolateral plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0016323 |
basolateral plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
enables |
GO:0002020 |
protease binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0016020 |
membrane |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0070508 |
cholesterol import |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034383 |
low-density lipoprotein particle clearance |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0030229 |
very-low-density lipoprotein particle receptor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0015914 |
phospholipid transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010899 |
regulation of phosphatidylcholine catabolic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0010867 |
positive regulation of triglyceride biosynthetic process |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009897 |
external side of plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005905 |
clathrin-coated pit |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005041 |
low-density lipoprotein particle receptor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005041 |
low-density lipoprotein particle receptor activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030301 |
cholesterol transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030299 |
intestinal cholesterol absorption |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009986 |
cell surface |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005770 |
late endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043235 |
receptor complex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0042802 |
identical protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046718 |
viral entry into host cell |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0001618 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1905907 |
negative regulation of amyloid fibril formation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1905167 |
positive regulation of lysosomal protein catabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1903979 |
negative regulation of microglial cell activation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0150094 |
amyloid-beta clearance by cellular catabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0097443 |
sorting endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0097242 |
amyloid-beta clearance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0090181 |
regulation of cholesterol metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071398 |
cellular response to fatty acid |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070508 |
cholesterol import |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061889 |
negative regulation of astrocyte activation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061771 |
response to caloric restriction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051248 |
negative regulation of protein metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051246 |
regulation of protein metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0050729 |
positive regulation of inflammatory response |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048844 |
artery morphogenesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0045177 |
apical part of cell |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042159 |
lipoprotein catabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0042157 |
lipoprotein metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0036477 |
somatodendritic compartment |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034384 |
high-density lipoprotein particle clearance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034383 |
low-density lipoprotein particle clearance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034381 |
plasma lipoprotein particle clearance |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030301 |
cholesterol transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0030229 |
very-low-density lipoprotein particle receptor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0030169 |
low-density lipoprotein particle binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0016323 |
basolateral plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0015914 |
phospholipid transport |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010899 |
regulation of phosphatidylcholine catabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010867 |
positive regulation of triglyceride biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010629 |
negative regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010628 |
positive regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0009986 |
cell surface |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008203 |
cholesterol metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007616 |
long-term memory |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006909 |
phagocytosis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006898 |
receptor-mediated endocytosis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005770 |
late endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005769 |
early endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005768 |
endosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005764 |
lysosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005623 |
cell |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005041 |
low-density lipoprotein particle receptor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0001540 |
amyloid-beta binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P35951 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0005509 |
calcium ion binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006898 |
receptor-mediated endocytosis |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
involved_in |
GO:0034381 |
plasma lipoprotein particle clearance |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0042632 |
cholesterol homeostasis |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030301 |
cholesterol transport |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
|
Seeded From UniProt |
complete | ||
enables |
GO:0005041 |
low-density lipoprotein particle receptor activity |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
F |
Seeded From UniProt |
complete | ||
enables |
GO:0032050 |
clathrin heavy chain binding |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006897 |
endocytosis |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
PMID:2777800[16] |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0061024 |
membrane organization |
Reactome:R-HSA-199991 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0036020 |
endolysosome membrane |
Reactome:R-HSA-6784738 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0034383 |
low-density lipoprotein particle clearance |
Reactome:R-HSA-8964038 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034382 |
chylomicron remnant clearance |
Reactome:R-HSA-8964026 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0030669 |
clathrin-coated endocytic vesicle membrane |
Reactome:R-HSA-174706 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0010008 |
endosome membrane |
Reactome:R-HSA-171106 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008202 |
steroid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006869 |
lipid transport |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005794 |
Golgi apparatus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005905 |
clathrin-coated pit |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006897 |
endocytosis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006629 |
lipid metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016032 |
viral process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005768 |
endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008203 |
cholesterol metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0001618 |
virus receptor activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0034362 |
low-density lipoprotein particle |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005764 |
lysosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005770 |
late endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 1.7 Tolleshaug, H et al. (1983) The LDL receptor locus in familial hypercholesterolemia: multiple mutations disrupt transport and processing of a membrane receptor. Cell 32 941-51 PubMed GONUTS page
- ↑ 2.0 2.1 Yamamoto, T et al. (1984) The human LDL receptor: a cysteine-rich protein with multiple Alu sequences in its mRNA. Cell 39 27-38 PubMed GONUTS page
- ↑ Ito, S et al. (2013) Nicotine-induced expression of low-density lipoprotein receptor in oral epithelial cells. PLoS ONE 8 e82563 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Johnson, LA et al. (2014) Apolipoprotein E-low density lipoprotein receptor interaction affects spatial memory retention and brain ApoE levels in an isoform-dependent manner. Neurobiol. Dis. 64 150-62 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 Lo Surdo, P et al. (2011) Mechanistic implications for LDL receptor degradation from the PCSK9/LDLR structure at neutral pH. EMBO Rep. 12 1300-5 PubMed GONUTS page
- ↑ 6.0 6.1 6.2 Seidah, NG et al. (2012) Annexin A2 is a natural extrahepatic inhibitor of the PCSK9-induced LDL receptor degradation. PLoS ONE 7 e41865 PubMed GONUTS page
- ↑ Ghosh, D et al. (2010) Defining the membrane proteome of NK cells. J Mass Spectrom 45 1-25 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 8.3 Humphries, SE et al. (2006) Genetic causes of familial hypercholesterolaemia in patients in the UK: relation to plasma lipid levels and coronary heart disease risk. J. Med. Genet. 43 943-9 PubMed GONUTS page
- ↑ 9.0 9.1 Kim, DH et al. (1996) Human apolipoprotein E receptor 2. A novel lipoprotein receptor of the low density lipoprotein receptor family predominantly expressed in brain. J. Biol. Chem. 271 8373-80 PubMed GONUTS page
- ↑ 10.0 10.1 10.2 10.3 Michaely, P et al. (2004) The modular adaptor protein ARH is required for low density lipoprotein (LDL) binding and internalization but not for LDL receptor clustering in coated pits. J. Biol. Chem. 279 34023-31 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 11.3 11.4 Nassoury, N et al. (2007) The cellular trafficking of the secretory proprotein convertase PCSK9 and its dependence on the LDLR. Traffic 8 718-32 PubMed GONUTS page
- ↑ Ghai, R et al. (2013) Structural basis for endosomal trafficking of diverse transmembrane cargos by PX-FERM proteins. Proc. Natl. Acad. Sci. U.S.A. 110 E643-52 PubMed GONUTS page
- ↑ Martínez-Oliván, J et al. (2015) The closed conformation of the LDL receptor is destabilized by the low Ca(++) concentration but favored by the high Mg(++) concentration in the endosome. FEBS Lett. 589 3534-40 PubMed GONUTS page
- ↑ Spencer, B et al. (2014) A neuroprotective brain-penetrating endopeptidase fusion protein ameliorates Alzheimer disease pathology and restores neurogenesis. J. Biol. Chem. 289 17917-31 PubMed GONUTS page
- ↑ 15.0 15.1 15.2 15.3 Kim, J et al. (2009) Overexpression of low-density lipoprotein receptor in the brain markedly inhibits amyloid deposition and increases extracellular A beta clearance. Neuron 64 632-44 PubMed GONUTS page
- ↑ 16.0 16.1 Miyake, Y et al. (1989) Analysis of a recycling-impaired mutant of low density lipoprotein receptor in familial hypercholesterolemia. J. Biol. Chem. 264 16584-90 PubMed GONUTS page
- ↑ Boll, W et al. (2002) The mu2 subunit of the clathrin adaptor AP-2 binds to FDNPVY and YppØ sorting signals at distinct sites. Traffic 3 590-600 PubMed GONUTS page
- ↑ May, P et al. (2003) Integration of endocytosis and signal transduction by lipoprotein receptors. Sci. STKE 2003 PE12 PubMed GONUTS page
- ↑ Gotthardt, M et al. (2000) Interactions of the low density lipoprotein receptor gene family with cytosolic adaptor and scaffold proteins suggest diverse biological functions in cellular communication and signal transduction. J. Biol. Chem. 275 25616-24 PubMed GONUTS page
- ↑ Russell, DW et al. (1984) Domain map of the LDL receptor: sequence homology with the epidermal growth factor precursor. Cell 37 577-85 PubMed GONUTS page
a
c
- GO:0005509 ! calcium ion binding
- Catarrhini
- GO:0071398 ! cellular response to fatty acid
- GO:0071404 ! cellular response to low-density lipoprotein particle stimulus
- GO:0009986 ! cell surface
- GO:0030301 ! cholesterol transport
- GO:0008203 ! cholesterol metabolic process
- GO:0070508 ! cholesterol import
- GO:0042632 ! cholesterol homeostasis
- Chordata
- GO:0034382 ! chylomicron remnant clearance
- GO:0005905 ! clathrin-coated pit
- GO:0030669 ! clathrin-coated endocytic vesicle membrane
- GO:0032050 ! clathrin heavy chain binding
- Craniata
e
i
l
- GO:0005770 ! late endosome
- GO:0006629 ! lipid metabolic process
- GO:0006869 ! lipid transport
- GO:0042157 ! lipoprotein metabolic process
- GO:0042159 ! lipoprotein catabolic process
- GO:0007616 ! long-term memory
- GO:0005041 ! low-density lipoprotein particle receptor activity
- GO:0030169 ! low-density lipoprotein particle binding
- GO:0034383 ! low-density lipoprotein particle clearance
- GO:0034362 ! low-density lipoprotein particle
- GO:1905146 ! lysosomal protein catabolic process
- GO:0005764 ! lysosome
m
n
- GO:0061889 ! negative regulation of astrocyte activation
- GO:2000272 ! negative regulation of signaling receptor activity
- GO:1903979 ! negative regulation of microglial cell activation
- GO:0051248 ! negative regulation of protein metabolic process
- GO:1905907 ! negative regulation of amyloid fibril formation
- GO:0001920 ! negative regulation of receptor recycling
- GO:0010629 ! negative regulation of gene expression
p
- GO:1990666 ! PCSK9-LDLR complex
- GO:0006909 ! phagocytosis
- GO:0015914 ! phospholipid transport
- GO:0034381 ! plasma lipoprotein particle clearance
- GO:0005886 ! plasma membrane
- GO:0010628 ! positive regulation of gene expression
- GO:0010867 ! positive regulation of triglyceride biosynthetic process
- GO:0032805 ! positive regulation of low-density lipoprotein particle receptor catabolic process
- GO:1905167 ! positive regulation of lysosomal protein catabolic process
- GO:0050729 ! positive regulation of inflammatory response
- Primates
- GO:0002020 ! protease binding
- GO:0006493 ! protein O-linked glycosylation
r
- GO:0006898 ! receptor-mediated endocytosis
- GO:0090118 ! receptor-mediated endocytosis involved in cholesterol transport
- GO:0043235 ! receptor complex
- GO:0051246 ! regulation of protein metabolic process
- GO:0090181 ! regulation of cholesterol metabolic process
- GO:0010899 ! regulation of phosphatidylcholine catabolic process
- GO:0061771 ! response to caloric restriction
s