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DROME:Q9V3I2
Contents
Species (Taxon ID) | Drosophila melanogaster (Fruit fly). (7227) | |
Gene Name(s) | No Information Provided. (synonyms: Drab5 (ECO:0000313 with EMBL:BAA87879.1)) | |
Protein Name(s) | Drab5 (ECO:0000313 with EMBL:BAA87879.1)
Rab5 (ECO:0000313 with EMBL:AAN85552.1) Rab5 protein (ECO:0000313 with EMBL:BAA88244.1) Rab5, isoform A (ECO:0000313 with EMBL:AAF51265.1) Rab5, isoform B (ECO:0000313 with EMBL:AAN10422.1) Rab5, isoform C (ECO:0000313 with EMBL:AAN10423.1) Rab5, isoform D (ECO:0000313 with EMBL:AAN10424.1) Rab5, isoform G (ECO:0000313 with EMBL:AGB92462.1) Rab5, isoform H (ECO:0000313 with EMBL:AGB92463.1) Rab5, isoform I (ECO:0000313 with EMBL:AGB92464.1) | |
External Links | ||
UniProt | Q9V3I2 | |
EMBL | AE014134 AY060343 AE014134 AE014134 AE014134 AE014134 AE014134 AY081180 AY081181 AE014134 AE014134 AE014134 AB035353 AB035671 BK000968 | |
RefSeq | NP_001259925.1 NP_001259926.1 NP_001259927.1 NP_523457.1 NP_722795.1 NP_722796.1 NP_722797.1 NP_722798.1 NP_722799.1 | |
UniGene | Dm.6724 | |
MINT | MINT-334912 | |
STRING | 7227.FBpp0077473 | |
EnsemblMetazoa | [example_ID FBtr0077793] [example_ID FBtr0077794] [example_ID FBtr0077795] [example_ID FBtr0077796] [example_ID FBtr0077797] [example_ID FBtr0077798] [example_ID FBtr0330668] [example_ID FBtr0330669] [example_ID FBtr0330670] | |
GeneID | 33418 | |
KEGG | dme:Dmel_CG3664 | |
UCSC | CG3664-RA | |
CTD | 33418 | |
FlyBase | FBgn0014010 | |
eggNOG | KOG0092 ENOG410YCCP | |
GeneTree | ENSGT00760000119101 | |
KO | K07889 | |
OMA | GASFFRY | |
OrthoDB | EOG77DJ7M | |
Reactome | R-DME-983231 | |
GenomeRNAi | 33418 | |
NextBio | 783450 | |
Proteomes | UP000000803 | |
GO | GO:0005769 GO:0030139 GO:0005811 GO:0043025 GO:0005886 GO:0045202 GO:0031982 GO:0005525 GO:0003924 GO:0048675 GO:0007409 GO:0007298 GO:0007349 GO:0006325 GO:0048813 GO:0046664 GO:0006897 GO:0034058 GO:0060429 GO:0035088 GO:0016321 GO:0007293 GO:0016348 GO:0048803 GO:0007067 GO:0008285 GO:0007220 GO:0048477 GO:0048227 GO:0015031 GO:0032482 GO:0030100 GO:0010906 GO:0050803 GO:0048488 GO:0016189 GO:0016192 GO:0035220 | |
Gene3D | 3.40.50.300 | |
InterPro | IPR027417 IPR005225 IPR001806 IPR003579 | |
Pfam | PF00071 | |
SMART | SM00175 | |
SUPFAM | SSF52540 | |
TIGRFAMs | TIGR00231 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0005769 |
early endosome |
ECO:0000314 |
C |
Figure 3. showed that full-length APP and C99, but not C83, induced the enlargement of Rab5+ early endosomes in PC12M cells. |
complete | |||||
involved_in |
GO:0034058 |
endosomal vesicle fusion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0099532 |
synaptic vesicle endosomal processing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
occurs_in:(GO:0031594) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048488 |
synaptic vesicle endocytosis |
ECO:0006063 |
over expression analysis evidence used in manual assertion |
P |
occurs_in:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048488 |
synaptic vesicle endocytosis |
ECO:0005589 |
confocal microscopy evidence used in manual assertion |
P |
occurs_in:(UBERON:0002421) |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032482 |
Rab protein signal transduction |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0015790 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0030139 |
endocytic vesicle |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:105306 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030100 |
regulation of endocytosis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0014010 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006897 |
endocytosis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0014010 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006886 |
intracellular protein transport |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1914292 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:105926 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005769 |
early endosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0014010 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005769 |
early endosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0014010 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005768 |
endosome |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:105926 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003924 |
GTPase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0015790 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005938 |
cell cortex |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0032509 |
endosome transport via multivesicular body sorting pathway |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048488 |
synaptic vesicle endocytosis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
FB:FBgn0034708 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048675 |
axon extension |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007298 |
border follicle cell migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0045202 |
synapse |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0043025 |
neuronal cell body |
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048803 |
imaginal disc-derived male genitalia morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0046664 |
dorsal closure, amnioserosa morphology change |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007298 |
border follicle cell migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048813 |
dendrite morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007409 |
axonogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034058 |
endosomal vesicle fusion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048227 |
plasma membrane to endosome transport |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030100 |
regulation of endocytosis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048477 |
oogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0035220 |
wing disc development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006897 |
endocytosis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007220 |
Notch receptor processing |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003924 |
GTPase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
FB:FBgn0015790 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032482 |
Rab protein signal transduction |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
FB:FBgn0015790 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0031982 |
vesicle |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
FB:FBgn0015790 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016192 |
vesicle-mediated transport |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
FB:FBgn0015790 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035088 |
establishment or maintenance of apical/basal cell polarity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008285 |
negative regulation of cell population proliferation |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007298 |
border follicle cell migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006897 |
endocytosis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007298 |
border follicle cell migration |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003924 |
GTPase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
Missing: with/from | |||
involved_in |
GO:0007349 |
cellularization |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0050803 |
regulation of synapse structure or activity |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016189 |
synaptic vesicle to endosome fusion |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0000278 |
mitotic cell cycle |
ECO:0007001 |
high throughput mutant phenotypic evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016321 |
female meiosis chromosome segregation |
ECO:0007001 |
high throughput mutant phenotypic evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0007001 |
high throughput mutant phenotypic evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005769 |
early endosome |
ECO:0000303 |
author statement without traceable support used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0061883 |
clathrin-dependent endocytosis involved in vitellogenesis |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0098793 |
presynapse |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0048488 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098793 |
presynapse |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0048488 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098793 |
presynapse |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0048488 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0098793 |
presynapse |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0048488 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003924 |
GTPase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005525 |
GTP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016189 |
synaptic vesicle to endosome fusion |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048488 |
synaptic vesicle endocytosis |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Xu, W et al. (2016) Amyloid precursor protein-mediated endocytic pathway disruption induces axonal dysfunction and neurodegeneration. J. Clin. Invest. PubMed GONUTS page
- ↑ Lőrincz, P et al. (2016) MiniCORVET is a Vps8-containing early endosomal tether in Drosophila. Elife 5 PubMed GONUTS page
- ↑ 3.0 3.1 Wucherpfennig, T et al. (2003) Role of Drosophila Rab5 during endosomal trafficking at the synapse and evoked neurotransmitter release. J. Cell Biol. 161 609-24 PubMed GONUTS page
- ↑ 4.0 4.1 Hoopmann, P et al. (2010) Endosomal sorting of readily releasable synaptic vesicles. Proc. Natl. Acad. Sci. U.S.A. 107 19055-60 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
- ↑ 6.0 6.1 Liu, G et al. (2015) Efficient Endocytic Uptake and Maturation in Drosophila Oocytes Requires Dynamitin/p50. Genetics 201 631-49 PubMed GONUTS page
- ↑ Wang, Y et al. (2017) Sec71 functions as a GEF for the small GTPase Arf1 to govern dendrite pruning of sensory neurons. Development 144 1851-1862 PubMed GONUTS page
- ↑ Inoshita, T et al. (2017) Vps35 in cooperation with LRRK2 regulates synaptic vesicle endocytosis through the endosomal pathway in Drosophila. Hum. Mol. Genet. 26 2933-2948 PubMed GONUTS page
- ↑ Sakuma, C et al. (2014) Drosophila Strip serves as a platform for early endosome organization during axon elongation. Nat Commun 5 5180 PubMed GONUTS page
- ↑ Tan, DJ et al. (2009) Mapping organelle proteins and protein complexes in Drosophila melanogaster. J. Proteome Res. 8 2667-78 PubMed GONUTS page
- ↑ Chen, DY et al. (2012) The Bro1-domain-containing protein Myopic/HDPTP coordinates with Rab4 to regulate cell adhesion and migration. J. Cell. Sci. 125 4841-52 PubMed GONUTS page
- ↑ Jean, S et al. (2012) Sbf/MTMR13 coordinates PI(3)P and Rab21 regulation in endocytic control of cellular remodeling. Mol. Biol. Cell 23 2723-40 PubMed GONUTS page
- ↑ 13.0 13.1 Chan, CC et al. (2011) Systematic discovery of Rab GTPases with synaptic functions in Drosophila. Curr. Biol. 21 1704-15 PubMed GONUTS page
- ↑ Lee, G et al. (2011) UVRAG is required for organ rotation by regulating Notch endocytosis in Drosophila. Dev. Biol. 356 588-97 PubMed GONUTS page
- ↑ Mateus, AM et al. (2011) Endocytic and recycling endosomes modulate cell shape changes and tissue behaviour during morphogenesis in Drosophila. PLoS ONE 6 e18729 PubMed GONUTS page
- ↑ Assaker, G et al. (2010) Spatial restriction of receptor tyrosine kinase activity through a polarized endocytic cycle controls border cell migration. Proc. Natl. Acad. Sci. U.S.A. 107 22558-63 PubMed GONUTS page
- ↑ 17.0 17.1 Satoh, D et al. (2008) Spatial control of branching within dendritic arbors by dynein-dependent transport of Rab5-endosomes. Nat. Cell Biol. 10 1164-71 PubMed GONUTS page
- ↑ 18.0 18.1 18.2 Morrison, HA et al. (2008) Regulation of early endosomal entry by the Drosophila tumor suppressors Rabenosyn and Vps45. Mol. Biol. Cell 19 4167-76 PubMed GONUTS page
- ↑ 19.0 19.1 Compagnon, J et al. (2009) Interplay between Rab5 and PtdIns(4,5)P2 controls early endocytosis in the Drosophila germline. J. Cell. Sci. 122 25-35 PubMed GONUTS page
- ↑ 20.0 20.1 20.2 Wilkin, M et al. (2008) Drosophila HOPS and AP-3 complex genes are required for a Deltex-regulated activation of notch in the endosomal trafficking pathway. Dev. Cell 15 762-72 PubMed GONUTS page
- ↑ 21.0 21.1 Lu, H & Bilder, D (2005) Endocytic control of epithelial polarity and proliferation in Drosophila. Nat. Cell Biol. 7 1232-9 PubMed GONUTS page
- ↑ 22.0 22.1 Schober, M et al. (2005) Function of the ETS transcription factor Yan in border cell migration. Development 132 3493-504 PubMed GONUTS page
- ↑ Medioni, C & Noselli, S (2005) Dynamics of the basement membrane in invasive epithelial clusters in Drosophila. Development 132 3069-77 PubMed GONUTS page
- ↑ Emery, G et al. (2005) Asymmetric Rab 11 endosomes regulate delta recycling and specify cell fate in the Drosophila nervous system. Cell 122 763-73 PubMed GONUTS page
- ↑ Jékely, G (2003) Small GTPases and the evolution of the eukaryotic cell. Bioessays 25 1129-38 PubMed GONUTS page
- ↑ Pelissier, A et al. (2003) Trafficking through Rab11 endosomes is required for cellularization during Drosophila embryogenesis. Curr. Biol. 13 1848-57 PubMed GONUTS page
- ↑ Shimizu, H et al. (2003) An essential role of Rab5 in uniformity of synaptic vesicle size. J. Cell. Sci. 116 3583-90 PubMed GONUTS page
- ↑ 28.0 28.1 28.2 Dobie, KW et al. (2001) Identification of chromosome inheritance modifiers in Drosophila melanogaster. Genetics 157 1623-37 PubMed GONUTS page
- ↑ 29.0 29.1 29.2 Entchev, EV et al. (2000) Gradient formation of the TGF-beta homolog Dpp. Cell 103 981-91 PubMed GONUTS page
c
d
e
- GO:0005769 ! early endosome
- Ecdysozoa
- GO:0030139 ! endocytic vesicle
- GO:0006897 ! endocytosis
- Endopterygota
- GO:0034058 ! endosomal vesicle fusion
- GO:0005768 ! endosome
- GO:0032509 ! endosome transport via multivesicular body sorting pathway
- Ephydroidea
- GO:0035088 ! establishment or maintenance of apical/basal cell polarity
- Eukaryota
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