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DANRE:VGFR4
Contents
Species (Taxon ID) | Danio rerio (Zebrafish) (Brachydanio rerio). (7955) | |
Gene Name(s) | kdrl | |
Protein Name(s) | Vascular endothelial growth factor receptor kdr-like
Fetal liver kinase 1 FLK-1 Kinase insert domain receptor-A Kinase insert domain receptor-like Protein-tyrosine kinase receptor flk-1 Vascular endothelial growth factor receptor 4 VEGFR-4 | |
External Links | ||
UniProt | Q8AXB3 | |
EMBL | AY056466 AF487829 CU458916 AL935131 BC129158 AF180354 U89515 U82383 U75995 | |
RefSeq | NP_571547.1 | |
UniGene | Dr.75094 | |
ProteinModelPortal | Q8AXB3 | |
SMR | Q8AXB3 | |
IntAct | Q8AXB3 | |
PRIDE | Q8AXB3 | |
GeneID | 796537 | |
KEGG | dre:796537 | |
CTD | 796537 | |
ZFIN | ZDB-GENE-000705-1 | |
eggNOG | COG0515 | |
HOVERGEN | HBG053432 | |
InParanoid | Q8AXB3 | |
KO | K05096 | |
PhylomeDB | Q8AXB3 | |
NextBio | 20932648 | |
Proteomes | UP000000437 | |
GO | GO:0016021 GO:0005886 GO:0005524 GO:0004713 GO:0004714 GO:0001525 GO:0048844 GO:0001568 GO:0030154 GO:0035050 GO:0018108 GO:0002040 GO:0030878 GO:0007169 | |
Gene3D | 2.60.40.10 | |
InterPro | IPR007110 IPR013783 IPR013098 IPR003599 IPR003598 IPR011009 IPR000719 IPR017441 IPR001245 IPR008266 IPR020635 IPR001824 | |
Pfam | PF07679 PF07714 | |
SMART | SM00409 SM00408 SM00219 | |
SUPFAM | SSF56112 | |
PROSITE | PS50835 PS00107 PS50011 PS00109 PS00240 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0018108 |
peptidyl-tyrosine phosphorylation |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004713 |
protein tyrosine kinase activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
GO:0001525 |
angiogenesis |
ECO:0000315 |
P |
Figure 5. Knockdown of ECSCR reduces VEGF-stimulated KDR proteolysis, whereas overexpression of ECSCR results in increased total and surface KDR protein |
complete | |||||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0048844 |
artery morphogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-090107-2 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0035050 |
embryonic heart tube development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030878 |
thyroid gland development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-040827-1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002040 |
sprouting angiogenesis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-GENO-130719-5 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001568 |
blood vessel development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-050906-2 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001568 |
blood vessel development |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-GENO-130719-5 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001568 |
blood vessel development |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-040827-1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-080516-10 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-060515-1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-GENO-040827-1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-GENO-040827-1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000316 |
genetic interaction evidence used in manual assertion |
ZFIN:ZDB-GENO-040827-1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-141209-4 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-080516-9 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-090610-6 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-090603-6 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-090603-19 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-MRPHLNO-090107-2 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-040827-1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
ZFIN:ZDB-GENO-030804-1 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0070374 |
positive regulation of ERK1 and ERK2 cascade |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1339758 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048010 |
vascular endothelial growth factor receptor signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95558 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043410 |
positive regulation of MAPK cascade |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003733 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043235 |
receptor complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0015380 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0038085 |
vascular endothelial growth factor binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN001974926 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0014068 |
positive regulation of phosphatidylinositol 3-kinase signaling |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002814439 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0008284 |
positive regulation of cell population proliferation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1339758 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007169 |
transmembrane receptor protein tyrosine kinase signaling pathway |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003366 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005887 |
integral component of plasma membrane |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003366 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0005021 |
vascular endothelial growth factor-activated receptor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95558 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0004714 |
transmembrane receptor protein tyrosine kinase activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0003733 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002040 |
sprouting angiogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002521319 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002040 |
sprouting angiogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95558 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0001570 |
vasculogenesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN002521319 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0038084 |
vascular endothelial growth factor signaling pathway |
ECO:0000364 |
evidence based on logical inference from manual annotation used in automatic assertion |
GO:0005021 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0004672 |
protein kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004713 |
protein tyrosine kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004714 |
transmembrane receptor protein tyrosine kinase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006468 |
protein phosphorylation |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR000719 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007169 |
transmembrane receptor protein tyrosine kinase signaling pathway |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004714 |
transmembrane receptor protein tyrosine kinase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0016021 |
integral component of membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0016740 |
transferase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030154 |
cell differentiation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0004713 |
protein tyrosine kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0001525 |
angiogenesis |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0016310 |
phosphorylation |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007275 |
multicellular organism development |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016301 |
kinase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 1.3 1.4 1.5 1.6 Covassin, LD et al. (2006) Distinct genetic interactions between multiple Vegf receptors are required for development of different blood vessel types in zebrafish. Proc. Natl. Acad. Sci. U.S.A. 103 6554-9 PubMed GONUTS page
- ↑ Kilari, S et al. (2013) Endothelial cell-specific chemotaxis receptor (ECSCR) enhances vascular endothelial growth factor (VEGF) receptor-2/kinase insert domain receptor (KDR) activation and promotes proteolysis of internalized KDR. J. Biol. Chem. 288 10265-74 PubMed GONUTS page
- ↑ 3.0 3.1 Habeck, H et al. (2002) Analysis of a zebrafish VEGF receptor mutant reveals specific disruption of angiogenesis. Curr. Biol. 12 1405-12 PubMed GONUTS page
- ↑ 4.0 4.1 Minehata, K et al. (2008) meis1 regulates the development of endothelial cells in zebrafish. Biochem. Biophys. Res. Commun. 374 647-52 PubMed GONUTS page
- ↑ Lee, YM et al. (2006) Vascular endothelial growth factor receptor signaling is required for cardiac valve formation in zebrafish. Dev. Dyn. 235 29-37 PubMed GONUTS page
- ↑ 6.0 6.1 Alt, B et al. (2006) Arteries define the position of the thyroid gland during its developmental relocalisation. Development 133 3797-804 PubMed GONUTS page
- ↑ 7.0 7.1 Villefranc, JA et al. (2013) A truncation allele in vascular endothelial growth factor c reveals distinct modes of signaling during lymphatic and vascular development. Development 140 1497-506 PubMed GONUTS page
- ↑ Jensen, LD et al. (2015) VEGF-B-Neuropilin-1 signaling is spatiotemporally indispensable for vascular and neuronal development in zebrafish. Proc. Natl. Acad. Sci. U.S.A. 112 E5944-53 PubMed GONUTS page
- ↑ 9.0 9.1 Bridge, G et al. (2012) The microRNA-30 family targets DLL4 to modulate endothelial cell behavior during angiogenesis. Blood 120 5063-72 PubMed GONUTS page
- ↑ Lai, JG et al. (2014) Zebrafish WNK lysine deficient protein kinase 1 (wnk1) affects angiogenesis associated with VEGF signaling. PLoS ONE 9 e106129 PubMed GONUTS page
- ↑ 11.0 11.1 11.2 Covassin, LD et al. (2009) A genetic screen for vascular mutants in zebrafish reveals dynamic roles for Vegf/Plcg1 signaling during artery development. Dev. Biol. 329 212-26 PubMed GONUTS page
- ↑ 12.00 12.01 12.02 12.03 12.04 12.05 12.06 12.07 12.08 12.09 12.10 12.11 12.12 12.13 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
a
c
p
- GO:0018108 ! peptidyl-tyrosine phosphorylation
- GO:0016310 ! phosphorylation
- GO:0005886 ! plasma membrane
- GO:0008284 ! positive regulation of cell population proliferation
- GO:0070374 ! positive regulation of ERK1 and ERK2 cascade
- GO:0043410 ! positive regulation of MAPK cascade
- GO:0004672 ! protein kinase activity
- GO:0006468 ! protein phosphorylation
- GO:0004713 ! protein tyrosine kinase activity
t
v
- GO:0005021 ! vascular endothelial growth factor receptor activity
- GO:0038085 ! vascular endothelial growth factor binding
- GO:0038084 ! vascular endothelial growth factor signaling pathway
- GO:0048010 ! vascular endothelial growth factor receptor signaling pathway
- GO:0001570 ! vasculogenesis
- Vertebrata