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Category:CACAO UW Fall 2012
Scoreboard
CALENDAR FOR ROUNDS
Inning/Round | Period | Start - End (CST) ( UW-Madison ) |
---|---|---|
1 | Annotation | Sept. 24, 6:00pm - Oct. 12, 11:59am |
1 | Challenge | Oct. 12, 12:00pm - Oct 15, 1:59am |
2 | Annotation | Oct 15, 2:00am - Nov 2, 11:59am |
2 | Challenge | Nov 2, 12:00pm - Nov. 3, 11:59am |
CACAO Materials
The following links/documents are accessible to all registered users, but for simplicity the information most often needed by students is listed first:
Student Materials
- HELP WITH EVIDENCE CODES
- helpful handouts for students
- rules
- Scoring of challenges
- syllabus
- Also see the information under the Fall 2012 heading below
Instructor Materials
CACAO UWisc Fall 2012
- Need a suggestion of a protein to annotate? Look here
- Want to get right to a paper? Try this list of PMIDs
- Confused as to what is required in the notes? This page has pretty good examples
- As well as the SPECIFIC figure, which is required, it is wise but not required to include a concise summary of the experiment & mention the assay, strain, and anything else pertinent
- Here's a list of the evidence codes that CACAO students may use:
- IDA: Inferred from Direct Assay
- IMP: Inferred from Mutant Phenotype
- IGI: Inferred from Genetic Interaction - requires with/from field to be filled in
- ISO: Inferred from Sequence Orthology - requires with/from field to be filled in
- ISA: Inferred from Sequence Alignment - requires with/from field to be filled in
- ISM: Inferred from Sequence Model - requires with/from field to be filled in
- IGC: Inferred from Genomic Context
- for more help on evidence codes, see helpful handouts for students or the GO Consortium documentation at: http://www.geneontology.org/GO.evidence.shtml