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CHICK:XRCC6
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | XRCC6 (synonyms: G22P1, KU70) | |
Protein Name(s) | X-ray repair cross-complementing protein 5
5'-deoxyribose-5-phosphate lyase Ku70 5'-dRP/AP lyase Ku70 ATP-dependent DNA helicase 2 subunit 1 ATP-dependent DNA helicase II 70 kDa subunit DNA repair protein XRCC6 Ku autoantigen protein p70 homolog Ku70 | |
External Links | ||
UniProt | O93257 | |
EMBL | AB016529 | |
RefSeq | NP_990258.1 | |
UniGene | Gga.26690 | |
ProteinModelPortal | O93257 | |
SMR | O93257 | |
BioGrid | 676041 | |
STRING | 9031.ENSGALP00000037185 | |
PaxDb | O93257 | |
PRIDE | O93257 | |
GeneID | 395767 | |
KEGG | gga:395767 | |
CTD | 2547 | |
eggNOG | NOG305318 | |
HOGENOM | HOG000006588 | |
HOVERGEN | HBG006236 | |
InParanoid | O93257 | |
KO | K10884 | |
PhylomeDB | O93257 | |
Reactome | REACT_115694 | |
NextBio | 20815835 | |
PRO | PR:O93257 | |
Proteomes | UP000000539 | |
GO | GO:0005694 GO:0043564 GO:0070419 GO:0005654 GO:0051575 GO:0005524 GO:0004003 GO:0003684 GO:0042162 GO:0006310 GO:0006281 GO:0006302 GO:0006303 GO:0045892 GO:0000723 GO:0006351 | |
Gene3D | 1.10.1600.10 1.10.720.30 2.40.290.10 3.40.50.410 4.10.970.10 | |
InterPro | IPR006165 IPR006164 IPR027388 IPR005160 IPR005161 IPR003034 IPR016194 IPR002035 | |
PANTHER | PTHR12604:SF2 | |
Pfam | PF02735 PF03730 PF03731 PF02037 | |
PIRSF | PIRSF003033 | |
SMART | SM00559 SM00513 | |
SUPFAM | SSF100939 SSF53300 | |
TIGRFAMs | TIGR00578 | |
PROSITE | PS50800 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:1990904 |
ribonucleoprotein complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003723 |
RNA binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071480 |
cellular response to gamma radiation |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0070419 |
nonhomologous end joining complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0051575 |
5'-deoxyribose-5-phosphate lyase activity |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0045892 |
negative regulation of transcription, DNA-templated |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043564 |
Ku70:Ku80 complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0071481 |
cellular response to X-ray |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000288287 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071480 |
cellular response to gamma radiation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0041627 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043564 |
Ku70:Ku80 complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0011774 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0042162 |
telomeric DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000288287 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0011774 |
P |
Seeded From UniProt |
complete | ||
contributes_to |
GO:0003690 |
double-stranded DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:95606 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000784 |
nuclear chromosome, telomeric region |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000288287 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000723 |
telomere maintenance |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0011774 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032508 |
DNA duplex unwinding |
ECO:0000366 |
evidence based on logical inference from automatic annotation used in automatic assertion |
GO:0004003 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000723 |
telomere maintenance |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003684 |
damaged DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004003 |
ATP-dependent DNA helicase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0042162 |
telomeric DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0043564 |
Ku70:Ku80 complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006303 |
double-strand break repair via nonhomologous end joining |
Reactome:R-GGA-353423 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-GGA-353313 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0004386 |
helicase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006310 |
DNA recombination |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0005524 |
ATP binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0000166 |
nucleotide binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0003824 |
catalytic activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006974 |
cellular response to DNA damage stimulus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0016829 |
lyase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
c
d
- GO:0003684 ! damaged DNA binding
- Dinosauria
- GO:0003677 ! DNA binding
- GO:0006974 ! DNA damage response
- GO:0032508 ! DNA duplex unwinding
- GO:0006310 ! DNA recombination
- GO:0006281 ! DNA repair
- GO:0003690 ! double-stranded DNA binding
- GO:0006303 ! double-strand break repair via nonhomologous end joining
n
t