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CHICK:VINC
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | VCL (synonyms: VINC1) | |
Protein Name(s) | Vinculin
Metavinculin | |
External Links | ||
UniProt | P12003 | |
EMBL | J04126 M87837 Y00312 | |
PIR | A31346 | |
RefSeq | NP_990772.1 | |
UniGene | Gga.698 | |
PDB | 1QKR 1ST6 1T01 1U6H 1XWJ 1ZVZ 1ZW2 1ZW3 2GDC 3ZDL 4E17 4E18 | |
PDBsum | 1QKR 1ST6 1T01 1U6H 1XWJ 1ZVZ 1ZW2 1ZW3 2GDC 3ZDL 4E17 4E18 | |
DisProt | DP00556 | |
ProteinModelPortal | P12003 | |
SMR | P12003 | |
BioGrid | 676671 | |
DIP | DIP-35191N | |
IntAct | P12003 | |
STRING | 9031.ENSGALP00000008131 | |
PaxDb | P12003 | |
PRIDE | P12003 | |
GeneID | 396422 | |
KEGG | gga:396422 | |
CTD | 7414 | |
eggNOG | NOG329927 | |
HOGENOM | HOG000007828 | |
HOVERGEN | HBG079758 | |
InParanoid | P12003 | |
KO | K05700 | |
PhylomeDB | P12003 | |
Reactome | REACT_234777 | |
EvolutionaryTrace | P12003 | |
NextBio | 20816463 | |
PRO | PR:P12003 | |
Proteomes | UP000000539 | |
ExpressionAtlas | P12003 | |
GO | GO:0015629 GO:0005912 GO:0005911 GO:0043034 GO:0070062 GO:0005916 GO:0005925 GO:0005743 GO:0005886 GO:0043234 GO:0045294 GO:0008013 GO:0045296 GO:0005198 GO:0034333 GO:0043297 GO:0090136 GO:0030032 GO:0002009 GO:0034394 GO:0030334 | |
InterPro | IPR017997 IPR006077 IPR000633 | |
PANTHER | PTHR18914 PTHR18914:SF22 | |
Pfam | PF01044 | |
SUPFAM | SSF47220 | |
PROSITE | PS00663 PS00664 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0042383 |
sarcolemma |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005925 |
focal adhesion |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000057) |
Seeded From UniProt |
complete | ||
part_of |
GO:0015629 |
actin cytoskeleton |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000057) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005925 |
focal adhesion |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0001725 |
stress fiber |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0097110 |
scaffold protein binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0017166 |
vinculin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0051393 |
alpha-actinin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0042803 |
protein homodimerization activity |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005623 |
cell |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0005052) |
Seeded From UniProt |
complete | ||
part_of |
GO:0098723 |
skeletal muscle myofibril |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0090636 |
outer dense plaque of desmosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0031594 |
neuromuscular junction |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005927 |
muscle tendon junction |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0090637 |
inner dense plaque of desmosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0090636 |
outer dense plaque of desmosome |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0011903) |
Seeded From UniProt |
complete | ||
NOT|part_of |
GO:0030486 |
smooth muscle dense body |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0011903) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005903 |
brush border |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
part_of |
GO:0005915 |
zonula adherens |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0002108) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005623 |
cell |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0001238) |
Seeded From UniProt |
complete | ||
part_of |
GO:1990357 |
terminal web |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0002108) |
Seeded From UniProt |
complete | ||
part_of |
GO:0042383 |
sarcolemma |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
|
Seeded From UniProt |
complete | ||
enables |
GO:0051371 |
muscle alpha-actinin binding |
ECO:0000315 |
mutant phenotype evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0098723 |
skeletal muscle myofibril |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000515) |
Seeded From UniProt |
complete | ||
part_of |
GO:0030018 |
Z disc |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000515) |
Seeded From UniProt |
complete | ||
part_of |
GO:0042383 |
sarcolemma |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(CL:0000515) |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090136 |
epithelial cell-cell adhesion |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0045296 |
cadherin binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0045294 |
alpha-catenin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0034333 |
adherens junction assembly |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0008013 |
beta-catenin binding |
ECO:0000314 |
direct assay evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0002009 |
morphogenesis of an epithelium |
ECO:0000314 |
direct assay evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043034 |
costamere |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030334 |
regulation of cell migration |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0030032 |
lamellipodium assembly |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005925 |
focal adhesion |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005912 |
adherens junction |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005743 |
mitochondrial inner membrane |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0090136 |
epithelial cell-cell adhesion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0045294 |
alpha-catenin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0043297 |
apical junction assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043034 |
costamere |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034394 |
protein localization to cell surface |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034333 |
adherens junction assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0032991 |
protein-containing complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0031625 |
ubiquitin protein ligase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005925 |
focal adhesion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005913 |
cell-cell adherens junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003779 |
actin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0002162 |
dystroglycan binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002009 |
morphogenesis of an epithelium |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P18206 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0048675 |
axon extension |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043034 |
costamere |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0042383 |
sarcolemma |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030334 |
regulation of cell migration |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030032 |
lamellipodium assembly |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0015629 |
actin cytoskeleton |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005925 |
focal adhesion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005916 |
fascia adherens |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005912 |
adherens junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005911 |
cell-cell junction |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0002102 |
podosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q64727 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005925 |
focal adhesion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:V9HWK2 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003779 |
actin binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0005198 |
structural molecule activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0015629 |
actin cytoskeleton |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0051015 |
actin filament binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:1990357 |
terminal web |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0090637 |
inner dense plaque of desmosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0090636 |
outer dense plaque of desmosome |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005915 |
zonula adherens |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005903 |
brush border |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005623 |
cell |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005856 |
cytoskeleton |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005886 |
plasma membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0030054 |
cell junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003779 |
actin binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0007155 |
cell adhesion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0016020 |
membrane |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005925 |
focal adhesion |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005912 |
adherens junction |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0042383 |
sarcolemma |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 Pomiès, P et al. (1999) Purification and characterization of an alpha-actinin-binding PDZ-LIM protein that is up-regulated during muscle differentiation. J. Biol. Chem. 274 29242-50 PubMed GONUTS page
- ↑ 2.0 2.1 2.2 Turner, CE et al. (1990) Paxillin: a new vinculin-binding protein present in focal adhesions. J. Cell Biol. 111 1059-68 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 McGregor, A et al. (1994) Identification of the vinculin-binding site in the cytoskeletal protein alpha-actinin. Biochem. J. 301 ( Pt 1) 225-33 PubMed GONUTS page
- ↑ 4.0 4.1 4.2 4.3 Shear, CR & Bloch, RJ (1985) Vinculin in subsarcolemmal densities in chicken skeletal muscle: localization and relationship to intracellular and extracellular structures. J. Cell Biol. 101 240-56 PubMed GONUTS page
- ↑ 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 Geiger, B et al. (1981) Immunoelectron microscope studies of membrane-microfilament interactions: distributions of alpha-actinin, tropomyosin, and vinculin in intestinal epithelial brush border and chicken gizzard smooth muscle cells. J. Cell Biol. 91 614-28 PubMed GONUTS page
- ↑ Flück, M et al. (1999) Focal adhesion proteins FAK and paxillin increase in hypertrophied skeletal muscle. Am. J. Physiol. 277 C152-62 PubMed GONUTS page
- ↑ 7.0 7.1 7.2 7.3 Zhang, ZQ et al. (2009) Sarcomeric-alpha-actinin defective in vinculin-binding causes Z-line expansion and nemaline-like body formation in cultured chick myotubes. Exp. Cell Res. 315 748-59 PubMed GONUTS page
- ↑ 8.0 8.1 8.2 8.3 8.4 8.5 Peng, X et al. (2010) Vinculin regulates cell-surface E-cadherin expression by binding to beta-catenin. J. Cell. Sci. 123 567-77 PubMed GONUTS page
- ↑ le Duc, Q et al. (2010) Vinculin potentiates E-cadherin mechanosensing and is recruited to actin-anchored sites within adherens junctions in a myosin II-dependent manner. J. Cell Biol. 189 1107-15 PubMed GONUTS page
- ↑ Miyazaki, T et al. (2003) Regulation of cytochrome c oxidase activity by c-Src in osteoclasts. J. Cell Biol. 160 709-18 PubMed GONUTS page
a
- GO:0003779 ! actin binding
- GO:0015629 ! actin cytoskeleton
- GO:0051015 ! actin filament binding
- GO:0005912 ! adherens junction
- GO:0034333 ! adherens junction assembly
- GO:0051393 ! alpha-actinin binding
- GO:0045294 ! alpha-catenin binding
- GO:0043297 ! apical junction assembly
- Archosauria
- Aves
- GO:0048675 ! axon extension
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