CHICK:Q98TX7

Species (Taxon ID)	Gallus gallus (Chicken). (9031)
Gene Name(s)	IRF-4 (ECO:0000313 with EMBL:AAK08198.1) (synonyms: IRF4 (ECO:0000313 with Ensembl:ENSGALP00000020897))
Protein Name(s)	Interferon regulatory factor 4 (ECO:0000313 with EMBL:AAK08198.1) Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000020897)
External Links
UniProt	Q98TX7
EMBL	AADN03002525 AF320331
RefSeq	NP_989630.1
UniGene	Gga.4374
SMR	Q98TX7
Ensembl	ENSGALT00000020927
GeneID	374179
KEGG	gga:374179
CTD	3662
GeneTree	ENSGT00760000119093
HOGENOM	HOG000010107
HOVERGEN	HBG003072
KO	K09445
OMA	DNGQRKN
OrthoDB	EOG7CCBR1
PhylomeDB	Q98TX7
TreeFam	TF328512
NextBio	20813685
PRO	PR:Q98TX7
Proteomes	UP000000539
GO	GO:0016020 GO:0000788 GO:0016279 GO:0000975 GO:0043565 GO:0003700 GO:0042832 GO:0043966 GO:0043967 GO:0043011 GO:0034122 GO:0043388 GO:0045082 GO:0045368 GO:0045086 GO:0045404 GO:0045944 GO:0045893 GO:0072540
Gene3D	1.10.10.10 2.60.200.10
InterPro	IPR019817 IPR001346 IPR019471 IPR017855 IPR008984 IPR011991
Pfam	PF00605 PF10401
PRINTS	PR00267
SMART	SM00348
SUPFAM	SSF49879
PROSITE	PS00601 PS51507

Annotations

Qualifier	GO ID	GO term name	Reference	ECO ID	ECO term name	with/from	Aspect	Notes	Status
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q15306	P	Seeded From UniProt	complete
involved_in	GO:0045404	positive regulation of interleukin-4 biosynthetic process	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q15306	P	Seeded From UniProt	complete
involved_in	GO:0045368	positive regulation of interleukin-13 biosynthetic process	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q15306	P	Seeded From UniProt	complete
involved_in	GO:0045086	positive regulation of interleukin-2 biosynthetic process	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q15306	P	Seeded From UniProt	complete
involved_in	GO:0045082	positive regulation of interleukin-10 biosynthetic process	GO_REF:0000024	ECO:0000250	sequence similarity evidence used in manual assertion	UniProtKB:Q15306	P	Seeded From UniProt	complete
part_of	GO:0005634	nucleus	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1096873 MGI:MGI:1859179 MGI:MGI:96395 MGI:MGI:96590 PANTHER:PTN000942746 RGD:2920 UniProtKB:O14896 UniProtKB:P10914 UniProtKB:P14316 UniProtKB:Q02556 UniProtKB:Q13568 UniProtKB:Q14653 UniProtKB:Q15306 UniProtKB:Q92985 ZFIN:ZDB-GENE-041114-13 ZFIN:ZDB-GENE-070912-330	C	Seeded From UniProt	complete
involved_in	GO:0002376	immune system process	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1096873 MGI:MGI:1350924 MGI:MGI:1859179 MGI:MGI:1859212 MGI:MGI:96395 MGI:MGI:96590 PANTHER:PTN000942747 UniProtKB:P10914 UniProtKB:P14316 UniProtKB:Q02556 UniProtKB:Q92985 ZFIN:ZDB-GENE-040718-367 ZFIN:ZDB-GENE-070912-330	P	Seeded From UniProt	complete
enables	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific	PMID:21873635^[1]	ECO:0000318	biological aspect of ancestor evidence used in manual assertion	MGI:MGI:1859212 PANTHER:PTN000942746 UniProtKB:P10914 UniProtKB:P14316 UniProtKB:Q02556 UniProtKB:Q14653 UniProtKB:Q15306 UniProtKB:Q92985 ZFIN:ZDB-GENE-070912-330	F	Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	P	Seeded From UniProt	complete
involved_in	GO:0045893	positive regulation of transcription, DNA-templated	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	P	Seeded From UniProt	complete
involved_in	GO:0045404	positive regulation of interleukin-4 biosynthetic process	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	P	Seeded From UniProt	complete
involved_in	GO:0045368	positive regulation of interleukin-13 biosynthetic process	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	P	Seeded From UniProt	complete
involved_in	GO:0045086	positive regulation of interleukin-2 biosynthetic process	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	P	Seeded From UniProt	complete
involved_in	GO:0045082	positive regulation of interleukin-10 biosynthetic process	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	P	Seeded From UniProt	complete
part_of	GO:0005654	nucleoplasm	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	C	Seeded From UniProt	complete
enables	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	F	Seeded From UniProt	complete
enables	GO:0000978	RNA polymerase II proximal promoter sequence-specific DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q15306 ensembl:ENSP00000370343	F	Seeded From UniProt	complete
involved_in	GO:0120162	positive regulation of cold-induced thermogenesis	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
involved_in	GO:0072540	T-helper 17 cell lineage commitment	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
involved_in	GO:0045944	positive regulation of transcription by RNA polymerase II	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
involved_in	GO:0043967	histone H4 acetylation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
involved_in	GO:0043966	histone H3 acetylation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
enables	GO:0043565	sequence-specific DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	F	Seeded From UniProt	complete
involved_in	GO:0043388	positive regulation of DNA binding	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
involved_in	GO:0043011	myeloid dendritic cell differentiation	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
involved_in	GO:0042832	defense response to protozoan	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
involved_in	GO:0034122	negative regulation of toll-like receptor signaling pathway	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	P	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	F	Seeded From UniProt	complete
part_of	GO:0000788	nuclear nucleosome	GO_REF:0000107	ECO:0000265	sequence orthology evidence used in automatic assertion	UniProtKB:Q64287 ensembl:ENSMUSP00000021784	C	Seeded From UniProt	complete
enables	GO:0003700	DNA-binding transcription factor activity	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR019471 InterPro:IPR019817	F	Seeded From UniProt	complete
involved_in	GO:0006355	regulation of transcription, DNA-templated	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR019471 InterPro:IPR019817	P	Seeded From UniProt	complete
enables	GO:0044212	transcription regulatory region DNA binding	GO_REF:0000002	ECO:0000256	match to sequence model evidence used in automatic assertion	InterPro:IPR001346	F	Seeded From UniProt	complete
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Notes

References

See Help:References for how to manage references in GONUTS.

↑ ^1.0 ^1.1 ^1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

[PMID:21873635-1] 1.0 ^1.1 ^1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page

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CHICK:Q98TX7

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Annotations

Notes

References

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