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CHICK:Q98TX7

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) IRF-4 (ECO:0000313 with EMBL:AAK08198.1) (synonyms: IRF4 (ECO:0000313 with Ensembl:ENSGALP00000020897))
Protein Name(s) Interferon regulatory factor 4 (ECO:0000313 with EMBL:AAK08198.1)

Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000020897)

External Links
UniProt Q98TX7
EMBL AADN03002525
AF320331
RefSeq NP_989630.1
UniGene Gga.4374
SMR Q98TX7
Ensembl ENSGALT00000020927
GeneID 374179
KEGG gga:374179
CTD 3662
GeneTree ENSGT00760000119093
HOGENOM HOG000010107
HOVERGEN HBG003072
KO K09445
OMA DNGQRKN
OrthoDB EOG7CCBR1
PhylomeDB Q98TX7
TreeFam TF328512
NextBio 20813685
PRO PR:Q98TX7
Proteomes UP000000539
GO GO:0016020
GO:0000788
GO:0016279
GO:0000975
GO:0043565
GO:0003700
GO:0042832
GO:0043966
GO:0043967
GO:0043011
GO:0034122
GO:0043388
GO:0045082
GO:0045368
GO:0045086
GO:0045404
GO:0045944
GO:0045893
GO:0072540
Gene3D 1.10.10.10
2.60.200.10
InterPro IPR019817
IPR001346
IPR019471
IPR017855
IPR008984
IPR011991
Pfam PF00605
PF10401
PRINTS PR00267
SMART SM00348
SUPFAM SSF49879
PROSITE PS00601
PS51507

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q15306

P

Seeded From UniProt

complete

involved_in

GO:0045404

positive regulation of interleukin-4 biosynthetic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q15306

P

Seeded From UniProt

complete

involved_in

GO:0045368

positive regulation of interleukin-13 biosynthetic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q15306

P

Seeded From UniProt

complete

involved_in

GO:0045086

positive regulation of interleukin-2 biosynthetic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q15306

P

Seeded From UniProt

complete

involved_in

GO:0045082

positive regulation of interleukin-10 biosynthetic process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:Q15306

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1096873
MGI:MGI:1859179
MGI:MGI:96395
MGI:MGI:96590
PANTHER:PTN000942746
RGD:2920
UniProtKB:O14896
UniProtKB:P10914
UniProtKB:P14316
UniProtKB:Q02556
UniProtKB:Q13568
UniProtKB:Q14653
UniProtKB:Q15306
UniProtKB:Q92985
ZFIN:ZDB-GENE-041114-13
ZFIN:ZDB-GENE-070912-330

C

Seeded From UniProt

complete

involved_in

GO:0002376

immune system process

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1096873
MGI:MGI:1350924
MGI:MGI:1859179
MGI:MGI:1859212
MGI:MGI:96395
MGI:MGI:96590
PANTHER:PTN000942747
UniProtKB:P10914
UniProtKB:P14316
UniProtKB:Q02556
UniProtKB:Q92985
ZFIN:ZDB-GENE-040718-367
ZFIN:ZDB-GENE-070912-330

P

Seeded From UniProt

complete

enables

GO:0000981

DNA-binding transcription factor activity, RNA polymerase II-specific

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:1859212
PANTHER:PTN000942746
UniProtKB:P10914
UniProtKB:P14316
UniProtKB:Q02556
UniProtKB:Q14653
UniProtKB:Q15306
UniProtKB:Q92985
ZFIN:ZDB-GENE-070912-330

F

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

P

Seeded From UniProt

complete

involved_in

GO:0045893

positive regulation of transcription, DNA-templated

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

P

Seeded From UniProt

complete

involved_in

GO:0045404

positive regulation of interleukin-4 biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

P

Seeded From UniProt

complete

involved_in

GO:0045368

positive regulation of interleukin-13 biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

P

Seeded From UniProt

complete

involved_in

GO:0045086

positive regulation of interleukin-2 biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

P

Seeded From UniProt

complete

involved_in

GO:0045082

positive regulation of interleukin-10 biosynthetic process

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

P

Seeded From UniProt

complete

part_of

GO:0005654

nucleoplasm

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

C

Seeded From UniProt

complete

enables

GO:0001228

DNA-binding transcription activator activity, RNA polymerase II-specific

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

F

Seeded From UniProt

complete

enables

GO:0000978

RNA polymerase II proximal promoter sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q15306
ensembl:ENSP00000370343

F

Seeded From UniProt

complete

involved_in

GO:0120162

positive regulation of cold-induced thermogenesis

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

involved_in

GO:0072540

T-helper 17 cell lineage commitment

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

involved_in

GO:0043967

histone H4 acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

involved_in

GO:0043966

histone H3 acetylation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

enables

GO:0043565

sequence-specific DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

F

Seeded From UniProt

complete

involved_in

GO:0043388

positive regulation of DNA binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

involved_in

GO:0043011

myeloid dendritic cell differentiation

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

involved_in

GO:0042832

defense response to protozoan

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

involved_in

GO:0034122

negative regulation of toll-like receptor signaling pathway

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

P

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

F

Seeded From UniProt

complete

part_of

GO:0000788

nuclear nucleosome

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:Q64287
ensembl:ENSMUSP00000021784

C

Seeded From UniProt

complete

enables

GO:0003700

DNA-binding transcription factor activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR019471
InterPro:IPR019817

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR019471
InterPro:IPR019817

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR001346

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page