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CHICK:Q90ZD4
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | IRF-3 (ECO:0000313 with EMBL:AAK58583.1) (synonyms: IRF7 (ECO:0000313 with Ensembl:ENSGALP00000038233)) | |
Protein Name(s) | Interferon regulatory factor-3 (ECO:0000313 with EMBL:AAK58583.1)
Uncharacterized protein (ECO:0000313 with Ensembl:ENSGALP00000038233) | |
External Links | ||
UniProt | Q90ZD4 | |
EMBL | AADN03004446 AF268079 | |
UniGene | Gga.1087 | |
Ensembl | ENSGALT00000039023 | |
GeneTree | ENSGT00760000119093 | |
HOVERGEN | HBG105600 | |
OMA | GWKTNFR | |
OrthoDB | EOG7W41BS | |
Reactome | REACT_197234 REACT_197235 REACT_252941 REACT_258049 | |
Proteomes | UP000000539 | |
GO | GO:0000982 GO:0000979 GO:0016064 GO:0032607 GO:0032608 GO:0032727 GO:0045944 GO:0060340 GO:0002819 GO:0034124 GO:0034127 GO:0045351 | |
Gene3D | 1.10.10.10 2.60.200.10 | |
InterPro | IPR019817 IPR001346 IPR019471 IPR017855 IPR008984 IPR011991 | |
Pfam | PF00605 PF10401 | |
PRINTS | PR00267 | |
SMART | SM00348 | |
SUPFAM | SSF49879 | |
PROSITE | PS00601 PS51507 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1096873 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002376 |
immune system process |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1096873 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:1859212 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060340 |
positive regulation of type I interferon-mediated signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0060337 |
type I interferon signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045351 |
type I interferon biosynthetic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034127 |
regulation of MyD88-independent toll-like receptor signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034124 |
regulation of MyD88-dependent toll-like receptor signaling pathway |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032608 |
interferon-beta production |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032607 |
interferon-alpha production |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032481 |
positive regulation of type I interferon production |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0016064 |
immunoglobulin mediated immune response |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0010468 |
regulation of gene expression |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0001158 |
enhancer sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000987 |
proximal promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P70434 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051607 |
defense response to virus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045944 |
positive regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045893 |
positive regulation of transcription, DNA-templated |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032728 |
positive regulation of interferon-beta production |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032727 |
positive regulation of interferon-alpha production |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005829 |
cytosol |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005737 |
cytoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0002819 |
regulation of adaptive immune response |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0000981 |
DNA-binding transcription factor activity, RNA polymerase II-specific |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000978 |
RNA polymerase II proximal promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q92985 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003700 |
DNA-binding transcription factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006355 |
regulation of transcription, DNA-templated |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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- Phasianidae
- Phasianinae
- GO:0045893 ! positive regulation of DNA-templated transcription
- GO:0032727 ! positive regulation of interferon-alpha production
- GO:0032728 ! positive regulation of interferon-beta production
- GO:0060340 ! positive regulation of type I interferon-mediated signaling pathway
- GO:0045944 ! positive regulation of transcription by RNA polymerase II
- GO:0032481 ! positive regulation of type I interferon production
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- GO:0002819 ! regulation of adaptive immune response
- GO:0010468 ! regulation of gene expression
- GO:0006355 ! regulation of DNA-templated transcription
- GO:0034124 ! regulation of MyD88-dependent toll-like receptor signaling pathway
- GO:0034127 ! regulation of MyD88-independent toll-like receptor signaling pathway
- GO:0000978 ! RNA polymerase II cis-regulatory region sequence-specific DNA binding
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