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CHICK:Q5ZIT7

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) PSMC3 (ECO:0000313 with Ensembl:ENSGALP00000037708)
Protein Name(s) Uncharacterized protein (ECO:0000313 with EMBL:CAG32356.1, ECO:0000313 with Ensembl:ENSGALP00000037708)
External Links
UniProt Q5ZIT7
EMBL AADN03004599
AJ720697
RefSeq NP_001026361.1
UniGene Gga.4649
STRING 9031.ENSGALP00000037708
PaxDb Q5ZIT7
Ensembl ENSGALT00000038503
GeneID 423182
KEGG gga:423182
CTD 5702
eggNOG COG1222
GeneTree ENSGT00730000111070
HOGENOM HOG000225143
HOVERGEN HBG000109
KO K03065
OMA ATELNHE
OrthoDB EOG7TMZRN
PhylomeDB Q5ZIT7
TreeFam TF105648
Reactome REACT_202415
REACT_209027
NextBio 20825684
PRO PR:Q5ZIT7
Proteomes UP000000539
GO GO:0000932
GO:0016020
GO:0005634
GO:0022624
GO:0005524
GO:0016787
GO:0030163
Gene3D 3.40.50.300
InterPro IPR005937
IPR003593
IPR003959
IPR003960
IPR027417
Pfam PF00004
SMART SM00382
SUPFAM SSF52540
TIGRFAMs TIGR01242
PROSITE PS00674

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0045899

positive regulation of RNA polymerase II transcriptional preinitiation complex assembly

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000553040
SGD:S000005643

P

Seeded From UniProt

complete

part_of

GO:0008540

proteasome regulatory particle, base subcomplex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0028684
PANTHER:PTN000553040
PomBase:SPAC3A11.12c
SGD:S000005643
TAIR:locus:2079742

C

Seeded From UniProt

complete

involved_in

GO:1901800

positive regulation of proteasomal protein catabolic process

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0036402

P

Seeded From UniProt

complete

part_of

GO:0022624

proteasome accessory complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O88685
ensembl:ENSMUSP00000071054

C

Seeded From UniProt

complete

part_of

GO:0000932

P-body

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:O88685
ensembl:ENSMUSP00000071054

C

Seeded From UniProt

complete

involved_in

GO:0045944

positive regulation of transcription by RNA polymerase II

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P17980
ensembl:ENSP00000481029

P

Seeded From UniProt

complete

involved_in

GO:0043921

modulation by host of viral transcription

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P17980
ensembl:ENSP00000481029

P

Seeded From UniProt

complete

enables

GO:0042802

identical protein binding

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P17980
ensembl:ENSP00000481029

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P17980
ensembl:ENSP00000481029

C

Seeded From UniProt

complete

part_of

GO:0000502

proteasome complex

GO_REF:0000107

ECO:0000265

sequence orthology evidence used in automatic assertion

UniProtKB:P17980
ensembl:ENSP00000481029

C

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003959
InterPro:IPR003960

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

C

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

F

Seeded From UniProt

complete

involved_in

GO:0030163

protein catabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

P

Seeded From UniProt

complete

enables

GO:0036402

proteasome-activating ATPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR035254

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000038

ECO:0000323

imported automatically asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page