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CHICK:PRS4

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Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) PSMC1
Protein Name(s) 26S protease regulatory subunit 4

P26s4 26S proteasome AAA-ATPase subunit RPT2 Proteasome 26S subunit ATPase 1

External Links
UniProt Q90732
EMBL U60187
PIR S74197
RefSeq NP_990289.1
UniGene Gga.1071
ProteinModelPortal Q90732
STRING 9031.ENSGALP00000017347
PaxDb Q90732
PRIDE Q90732
GeneID 395804
KEGG gga:395804
CTD 5700
eggNOG COG1222
HOGENOM HOG000225143
HOVERGEN HBG000109
InParanoid Q90732
KO K03062
PhylomeDB Q90732
NextBio 20815872
PRO PR:Q90732
Proteomes UP000000539
GO GO:0005737
GO:0005634
GO:0022624
GO:0005524
GO:0016787
GO:0030163
Gene3D 3.40.50.300
InterPro IPR005937
IPR003593
IPR003959
IPR003960
IPR027417
Pfam PF00004
SMART SM00382
SUPFAM SSF52540
TIGRFAMs TIGR01242
PROSITE PS00674

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

part_of

GO:0022624

proteasome accessory complex

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P62192

C

Seeded From UniProt

complete

enables

GO:0036402

proteasome-activating ATPase activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000553258
SGD:S000002165

F

Seeded From UniProt

complete

enables

GO:0017025

TBP-class protein binding

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN000553258
RGD:621097

F

Seeded From UniProt

complete

part_of

GO:0008540

proteasome regulatory particle, base subcomplex

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

FB:FBgn0015282
PANTHER:PTN000553258
PomBase:SPBC4.07c
SGD:S000002165
TAIR:locus:2119926

C

Seeded From UniProt

complete

involved_in

GO:1901800

positive regulation of proteasomal protein catabolic process

GO_REF:0000108

ECO:0000366

evidence based on logical inference from automatic annotation used in automatic assertion

GO:0036402

P

Seeded From UniProt

complete

involved_in

GO:1901800

positive regulation of proteasomal protein catabolic process

GO_REF:0000108

ECO:0000364

evidence based on logical inference from manual annotation used in automatic assertion

GO:0036402

P

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR003959
InterPro:IPR003960

F

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

C

Seeded From UniProt

complete

enables

GO:0016787

hydrolase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

F

Seeded From UniProt

complete

involved_in

GO:0030163

protein catabolic process

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR005937

P

Seeded From UniProt

complete

enables

GO:0036402

proteasome-activating ATPase activity

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR035244

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0539
UniProtKB-SubCell:SL-0191

C

Seeded From UniProt

complete

part_of

GO:0005737

cytoplasm

GO_REF:0000037
GO_REF:0000039

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0963
UniProtKB-SubCell:SL-0086

C

Seeded From UniProt

complete

part_of

GO:0000502

proteasome complex

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0647

C

Seeded From UniProt

complete

enables

GO:0000166

nucleotide binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0547

F

Seeded From UniProt

complete

enables

GO:0005524

ATP binding

GO_REF:0000037

ECO:0000322

imported manually asserted information used in automatic assertion

UniProtKB-KW:KW-0067

F

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page