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CHICK:PCNA
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | PCNA | |
Protein Name(s) | Proliferating cell nuclear antigen
PCNA | |
External Links | ||
UniProt | Q9DEA3 | |
EMBL | AB053163 | |
RefSeq | NP_989501.1 | |
UniGene | Gga.4036 | |
ProteinModelPortal | Q9DEA3 | |
SMR | Q9DEA3 | |
BioGrid | 675031 | |
STRING | 9031.ENSGALP00000040305 | |
PaxDb | Q9DEA3 | |
PRIDE | Q9DEA3 | |
Ensembl | ENSGALT00000000225 | |
GeneID | 373984 | |
KEGG | gga:373984 | |
CTD | 5111 | |
eggNOG | COG0592 | |
GeneTree | ENSGT00390000004965 | |
HOGENOM | HOG000211098 | |
HOVERGEN | HBG000947 | |
InParanoid | Q9DEA3 | |
KO | K04802 | |
OMA | VTFVFES | |
OrthoDB | EOG7JX34W | |
PhylomeDB | Q9DEA3 | |
Reactome | REACT_115867 REACT_116049 REACT_197098 REACT_197458 REACT_204174 REACT_216249 REACT_227032 REACT_241356 REACT_245426 REACT_249594 REACT_251811 REACT_252616 REACT_254546 | |
NextBio | 20813513 | |
PRO | PR:Q9DEA3 | |
Proteomes | UP000000539 | |
GO | GO:0005813 GO:0005737 GO:0070062 GO:0043596 GO:0005654 GO:0005634 GO:0043626 GO:0070557 GO:0032139 GO:0030337 GO:0000701 GO:0006281 GO:0030855 GO:0006272 GO:0006298 GO:0032077 GO:0006275 GO:0019985 | |
HAMAP | MF_00317 | |
InterPro | IPR000730 IPR022649 IPR022659 IPR022648 | |
PANTHER | PTHR11352 | |
Pfam | PF02747 PF00705 | |
PRINTS | PR00339 | |
TIGRFAMs | TIGR00590 | |
PROSITE | PS01251 PS00293 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
part_of |
GO:0000785 |
chromatin |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003682 |
chromatin binding |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0019899 |
enzyme binding |
ECO:0000353 |
physical interaction evidence used in manual assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000314 |
direct assay evidence used in manual assertion |
C |
part_of:(UBERON:0003051)|part_of:(UBERON:0013731) |
Seeded From UniProt |
complete | ||
part_of |
GO:0070557 |
PCNA-p21 complex |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0019985 |
translesion synthesis |
ECO:0000250 |
sequence similarity evidence used in manual assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0043626 |
PCNA complex |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000143422 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0030337 |
DNA polymerase processivity factor activity |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000143422 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019985 |
translesion synthesis |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000143427 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006298 |
mismatch repair |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000143427 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006272 |
leading strand elongation |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
PANTHER:PTN000143422 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
FB:FBgn0005655 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0070557 |
PCNA-p21 complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0070182 |
DNA polymerase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045740 |
positive regulation of DNA replication |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045739 |
positive regulation of DNA repair |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0043626 |
PCNA complex |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0043596 |
nuclear replication fork |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0042802 |
identical protein binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0035035 |
histone acetyltransferase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034644 |
cellular response to UV |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0032405 |
MutLalpha complex binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0032139 |
dinucleotide insertion or deletion binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0032077 |
positive regulation of deoxyribonuclease activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0030971 |
receptor tyrosine kinase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0030855 |
epithelial cell differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019985 |
translesion synthesis |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0019899 |
enzyme binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0016604 |
nuclear body |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:0006298 |
mismatch repair |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005813 |
centrosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005657 |
replication fork |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003684 |
damaged DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003682 |
chromatin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000785 |
chromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0000701 |
purine-specific mismatch base pair DNA N-glycosylase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:P12004 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006275 |
regulation of DNA replication |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0030337 |
DNA polymerase processivity factor activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006281 |
DNA repair |
Reactome:R-GGA-353377 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005654 |
nucleoplasm |
Reactome:R-GGA-353476 |
ECO:0000304 |
author statement supported by traceable reference used in manual assertion |
|
C |
Seeded From UniProt |
complete | |
involved_in |
GO:0006260 |
DNA replication |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Niimi, A et al. (2001) Co-localization of chicken DNA topoisomerase IIalpha, but not beta, with sites of DNA replication and possible involvement of a C-terminal region of alpha through its binding to PCNA. Chromosoma 110 102-14 PubMed GONUTS page
- ↑ Neves, J et al. (2007) Differential expression of Sox2 and Sox3 in neuronal and sensory progenitors of the developing inner ear of the chick. J. Comp. Neurol. 503 487-500 PubMed GONUTS page
- ↑ 3.0 3.1 3.2 3.3 3.4 3.5 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
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- GO:0070557 ! PCNA-p21 complex
- GO:0043626 ! PCNA complex
- Phasianidae
- Phasianinae
- GO:0032077 ! positive regulation of deoxyribonuclease activity
- GO:0045740 ! positive regulation of DNA replication
- GO:0045739 ! positive regulation of DNA repair
- GO:0000701 ! purine-specific mismatch base pair DNA N-glycosylase activity
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