GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.

Have any questions? Please email us at ecoliwiki@gmail.com

CHICK:O73816

From GONUTS
Jump to: navigation, search
Species (Taxon ID) Gallus gallus (Chicken). (9031)
Gene Name(s) HMGI-C (ECO:0000313 with EMBL:AAC33439.1)
Protein Name(s) High mobility group protein I-C (ECO:0000313 with EMBL:AAC33439.1)
External Links
UniProt O73816
EMBL AF058287
RefSeq NP_990332.1
UniGene Gga.502
STRING 9031.ENSGALP00000016038
GeneID 395851
KEGG gga:395851
CTD 8091
eggNOG NOG295015
HOVERGEN HBG051913
KO K09283
PhylomeDB O73816
NextBio 20815918
PRO PR:O73816
ExpressionAtlas O73816
GO GO:0000785
GO:0000228
GO:0000975
GO:0001077
GO:0030325
GO:0021846
GO:0060613
GO:0008584
GO:0048712
GO:0021983
GO:0008284
GO:0010628
GO:0040018
GO:0010564
GO:0060123
GO:0035019
GO:0007283
InterPro IPR020478
IPR017956
IPR000116
IPR000637
Pfam PF02178
PRINTS PR00929
PR00930
SMART SM00384
PROSITE PS00354

Annotations

Qualifier GO ID GO term name Reference ECO ID ECO term name with/from Aspect Extension Notes Status

involved_in

GO:0010628

positive regulation of gene expression

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P52927

P

Seeded From UniProt

complete

involved_in

GO:0010564

regulation of cell cycle process

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P52927

P

Seeded From UniProt

complete

enables

GO:0044212

transcription regulatory region DNA binding

GO_REF:0000024

ECO:0000250

sequence similarity evidence used in manual assertion

UniProtKB:P52926

F

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001155469
UniProtKB:P52926

P

Seeded From UniProt

complete

involved_in

GO:0006284

base-excision repair

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001155469
UniProtKB:P17096
UniProtKB:P52926

P

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

MGI:MGI:101761
MGI:MGI:96160
PANTHER:PTN001155469
RGD:620617
UniProtKB:P17096
UniProtKB:P52926

C

Seeded From UniProt

complete

enables

GO:0003906

DNA-(apurinic or apyrimidinic site) endonuclease activity

PMID:21873635[1]

ECO:0000318

biological aspect of ancestor evidence used in manual assertion

PANTHER:PTN001155469
UniProtKB:P17096
UniProtKB:P52926

F

Seeded From UniProt

complete

part_of

GO:0000785

chromatin

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000116

C

Seeded From UniProt

complete

enables

GO:0003677

DNA binding

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000116
InterPro:IPR017956

F

Seeded From UniProt

complete

part_of

GO:0005634

nucleus

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000116

C

Seeded From UniProt

complete

involved_in

GO:0006355

regulation of transcription, DNA-templated

GO_REF:0000002

ECO:0000256

match to sequence model evidence used in automatic assertion

InterPro:IPR000116
InterPro:IPR000637

P

Seeded From UniProt

complete

Notes

References

See Help:References for how to manage references in GONUTS.

  1. 1.0 1.1 1.2 1.3 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page