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CHICK:H2AY
Contents
Species (Taxon ID) | Gallus gallus (Chicken). (9031) | |
Gene Name(s) | H2AFY | |
Protein Name(s) | Core histone macro-H2A.1
Histone macroH2A1 mH2A1 H2A.y H2A/y | |
External Links | ||
UniProt | O93327 | |
EMBL | AF058445 AF058446 | |
RefSeq | NP_990338.1 | |
UniGene | Gga.3138 | |
ProteinModelPortal | O93327 | |
SMR | O93327 | |
STRING | 9031.ENSGALP00000010266 | |
PaxDb | O93327 | |
PRIDE | O93327 | |
Ensembl | ENSGALT00000010280 ENSGALT00000010281 | |
GeneID | 395858 | |
KEGG | gga:395858 | |
CTD | 9555 | |
eggNOG | COG2110 | |
GeneTree | ENSGT00760000119217 | |
HOGENOM | HOG000234653 | |
HOVERGEN | HBG009342 | |
InParanoid | O93327 | |
KO | K11251 | |
OMA | KGGKEFT | |
OrthoDB | EOG71G9VP | |
PhylomeDB | O93327 | |
TreeFam | TF332276 | |
NextBio | 20815925 | |
PRO | PR:O93327 | |
Proteomes | UP000000539 | |
ExpressionAtlas | O93327 | |
GO | GO:0000793 GO:0035098 GO:0070062 GO:0000790 GO:0005730 GO:0000786 GO:0005721 GO:0031490 GO:0010385 GO:0030291 GO:0000182 GO:0000979 GO:0016568 GO:0007549 GO:0071169 GO:1902750 GO:0045814 GO:0061086 GO:0051572 GO:0033128 GO:0000122 GO:1901837 GO:0006334 GO:0045815 GO:0045618 GO:0019216 | |
Gene3D | 1.10.20.10 | |
InterPro | IPR021171 IPR009072 IPR007125 IPR002119 IPR002589 | |
Pfam | PF00125 PF01661 | |
PIRSF | PIRSF037942 | |
PRINTS | PR00620 | |
SMART | SM00506 SM00414 | |
SUPFAM | SSF47113 | |
PROSITE | PS51154 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:2448285 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0003677 |
DNA binding |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
CGD:CAL0000179664 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000318 |
biological aspect of ancestor evidence used in manual assertion |
MGI:MGI:102688 |
C |
Seeded From UniProt |
complete | ||
involved_in |
GO:1904815 |
negative regulation of protein localization to chromosome, telomeric region |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1902882 |
regulation of response to oxidative stress |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1902750 |
negative regulation of cell cycle G2/M phase transition |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1901837 |
negative regulation of transcription of nucleolar large rRNA by RNA polymerase I |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071901 |
negative regulation of protein serine/threonine kinase activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0071169 |
establishment of protein localization to chromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0061086 |
negative regulation of histone H3-K27 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0051572 |
negative regulation of histone H3-K4 methylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045815 |
positive regulation of gene expression, epigenetic |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045814 |
negative regulation of gene expression, epigenetic |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0045618 |
positive regulation of keratinocyte differentiation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0044212 |
transcription regulatory region DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0040029 |
regulation of gene expression, epigenetic |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0034184 |
positive regulation of maintenance of mitotic sister chromatid cohesion |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:0033128 |
negative regulation of histone phosphorylation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0031492 |
nucleosomal DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0031490 |
chromatin DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0030291 |
protein serine/threonine kinase inhibitor activity |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0019901 |
protein kinase binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0019899 |
enzyme binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0019216 |
regulation of lipid metabolic process |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0010385 |
double-stranded methylated DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0007549 |
dosage compensation |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
part_of |
GO:0005730 |
nucleolus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005721 |
pericentric heterochromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0000979 |
RNA polymerase II core promoter sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
enables |
GO:0000977 |
RNA polymerase II regulatory region sequence-specific DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000790 |
nuclear chromatin |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000228 |
nuclear chromosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0000182 |
rDNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0000122 |
negative regulation of transcription by RNA polymerase II |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:O75367 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:1990841 |
promoter-specific chromatin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9QZQ8 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:1902882 |
regulation of response to oxidative stress |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9QZQ8 |
P |
Seeded From UniProt |
complete | ||
involved_in |
GO:1901837 |
negative regulation of transcription of nucleolar large rRNA by RNA polymerase I |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9QZQ8 |
P |
Seeded From UniProt |
complete | ||
enables |
GO:0031492 |
nucleosomal DNA binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9QZQ8 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0005634 |
nucleus |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9QZQ8 |
C |
Seeded From UniProt |
complete | ||
enables |
GO:0003682 |
chromatin binding |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9QZQ8 |
F |
Seeded From UniProt |
complete | ||
part_of |
GO:0000793 |
condensed chromosome |
ECO:0000265 |
sequence orthology evidence used in automatic assertion |
UniProtKB:Q9QZQ8 |
C |
Seeded From UniProt |
complete | ||
part_of |
GO:0000786 |
nucleosome |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006334 |
nucleosome assembly |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0046982 |
protein heterodimerization activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0005694 |
chromosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
part_of |
GO:0005634 |
nucleus |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006325 |
chromatin organization |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
enables |
GO:0003677 |
DNA binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
part_of |
GO:0000786 |
nucleosome |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ 1.0 1.1 1.2 Gaudet, P et al. (2011) Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics 12 449-62 PubMed GONUTS page
c
e
m
n
- GO:0000122 ! negative regulation of transcription by RNA polymerase II
- GO:0071901 ! negative regulation of protein serine/threonine kinase activity
- GO:1904815 ! negative regulation of protein localization to chromosome, telomeric region
- GO:0045814 ! negative regulation of gene expression, epigenetic
- GO:1901837 ! negative regulation of transcription of nucleolar large rRNA by RNA polymerase I
- GO:1902750 ! negative regulation of cell cycle G2/M phase transition
- Neognathae
- GO:0000790 ! nuclear chromatin
- GO:0000228 ! nuclear chromosome
- GO:0005730 ! nucleolus
- GO:0031492 ! nucleosomal DNA binding
- GO:0000786 ! nucleosome
- GO:0006334 ! nucleosome assembly
- GO:0005634 ! nucleus
o
p
- GO:0005721 ! pericentric heterochromatin
- Phasianidae
- Phasianinae
- GO:0045618 ! positive regulation of keratinocyte differentiation
- GO:0034184 ! positive regulation of maintenance of mitotic sister chromatid cohesion
- GO:1990841 ! promoter-specific chromatin binding
- GO:0046982 ! protein heterodimerization activity
- GO:0019901 ! protein kinase binding
- GO:0030291 ! protein serine/threonine kinase inhibitor activity
r
- GO:0000182 ! rDNA binding
- GO:1902882 ! regulation of response to oxidative stress
- GO:0019216 ! regulation of lipid metabolic process
- GO:0000979 ! RNA polymerase II core promoter sequence-specific DNA binding
- GO:0000977 ! RNA polymerase II transcription regulatory region sequence-specific DNA binding
t