GONUTS has been updated to MW1.31 Most things seem to be working but be sure to report problems.
BACSU:BGAL2
Contents
Species (Taxon ID) | Bacillus subtilis (strain 168). (224308) | |
Gene Name(s) | ganA (synonyms: galO, lacA, yvfN) | |
Protein Name(s) | Beta-galactosidase GanA
Beta-gal Beta-1,4-galactooligomerase Galactooligomerase | |
External Links | ||
UniProt | O07012 | |
EMBL | Z94043 AL009126 | |
PIR | B69649 | |
RefSeq | NP_391293.1 | |
ProteinModelPortal | O07012 | |
SMR | O07012 | |
STRING | 224308.BSU34130 | |
CAZy | GH42 | |
PaxDb | O07012 | |
EnsemblBacteria | CAB15418 | |
GeneID | 936313 | |
KEGG | bsu:BSU34130 | |
PATRIC | 18978828 | |
GenoList | BSU34130 | |
eggNOG | COG1874 | |
HOGENOM | HOG000117811 | |
InParanoid | O07012 | |
KO | K12308 | |
OrthoDB | EOG6GTZGG | |
BioCyc | BSUB:BSU34130-MONOMER | |
Proteomes | UP000001570 | |
GO | GO:0009341 GO:0004565 GO:0046872 GO:0006012 | |
Gene3D | 3.20.20.80 3.40.50.880 | |
InterPro | IPR013739 IPR013738 IPR029062 IPR003476 IPR013529 IPR013781 IPR017853 | |
Pfam | PF02449 PF08533 PF08532 | |
PIRSF | PIRSF001084 | |
SUPFAM | SSF51445 SSF52317 |
Annotations
Qualifier | GO ID | GO term name | Reference | ECO ID | ECO term name | with/from | Aspect | Extension | Notes | Status |
---|---|---|---|---|---|---|---|---|---|---|
GO:0004565 |
beta-galactosidase activity |
ECO:0000315 |
F |
LacR is known to be a regulator for lacA activity. Figure 2 shows that when mutant lacR strains are utilized, beta galactosidase activity is up regulated as long as there are no mutations in lacA. Mutant lacA strains results in decreased or no beta galactosidase activity showing that it is necessary for it to occur. |
complete | |||||
GO:0004565 |
beta-galactosidase activity |
ECO:0000316 |
|
F |
Figure 1 shows that lacR is responsible for regulating beta-galactosidase activity and the lacR1 mutation upregulates beta-galactosidase activity. Figure 2 shows that when the same mutation is applied along with the lacA17 mutation, beta-galactosidase activity decreases showing that lacA is directly responsible for beta-galactosidase activity and is regulated by lacR. |
complete | ||||
GO:0004565 |
beta-galactosidase activity |
ECO:0000315 |
F |
Figure 3 presents a wild type plate that has grown blue colonies as a result of beta-galactosidase activity. When lacA is interrupted by the insertion of the CAT cassette as in the second plate shown, this expression is eliminated resulting in plain white colonies. |
complete | |||||
enables |
GO:0004565 |
beta-galactosidase activity |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
InterPro:IPR003476 |
F |
Seeded From UniProt |
complete | ||
involved_in |
GO:0005975 |
carbohydrate metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
involved_in |
GO:0006012 |
galactose metabolic process |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
part_of |
GO:0009341 |
beta-galactosidase complex |
ECO:0000256 |
match to sequence model evidence used in automatic assertion |
C |
Seeded From UniProt |
complete | |||
enables |
GO:0004565 |
beta-galactosidase activity |
ECO:0000501 |
evidence used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0046872 |
metal ion binding |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016787 |
hydrolase activity |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
enables |
GO:0016798 |
hydrolase activity, acting on glycosyl bonds |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
F |
Seeded From UniProt |
complete | |||
involved_in |
GO:0008152 |
metabolic process |
ECO:0000322 |
imported manually asserted information used in automatic assertion |
P |
Seeded From UniProt |
complete | |||
Notes
References
See Help:References for how to manage references in GONUTS.
- ↑ Daniel, RA et al. (1997) Isolation and characterization of the lacA gene encoding beta-galactosidase in Bacillus subtilis and a regulator gene, lacR. J. Bacteriol. 179 5636-8 PubMed GONUTS page
- ↑ 2.0 2.1 Errington, J & Vogt, CH (1990) Isolation and characterization of mutations in the gene encoding an endogenous Bacillus subtilis beta-galactosidase and its regulator. J. Bacteriol. 172 488-90 PubMed GONUTS page
- ↑ Shipkowski, S & Brenchley, JE (2006) Bioinformatic, genetic, and biochemical evidence that some glycoside hydrolase family 42 beta-galactosidases are arabinogalactan type I oligomer hydrolases. Appl. Environ. Microbiol. 72 7730-8 PubMed GONUTS page